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LOCUS XM_044395803 6261 bp mRNA linear INV 09-DEC-2024 (LOC108054789), transcript variant X2, mRNA. ACCESSION XM_044395803 VERSION XM_044395803.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044395803.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6261 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6261 /gene="LOC108054789" /note="uncharacterized LOC108054789; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054789" CDS 130..4857 /gene="LOC108054789" /codon_start=1 /product="uncharacterized protein isoform X2" /protein_id="XP_044251738.1" /db_xref="GeneID:108054789" /translation="MDARRQKRLGPAPIASFEKSFEDNATTTAQLQSQHSQQEQQHHH LHQHPGHAAMMEQGVRNQTTMSTTTNRNRTAGGIEAPSIATASASASASTSATSAASA ASASASSSSSSSVSSATCSATIVQAKQRPPPLKTATTTVTTTLVSSSEGGQPIPPTAH SGGGPGGPGGPGGPGGASGSGSYRGAATLTTPSTPRIELSRASSSSHHEEDSRESSPE NVFEQETIGLGFREEGALELRSSTEELYFMDPEQKKEEQERIQQQQQQAKRSSPHIFK FDEHQSYLQQHQRKDSASSEVAALLCISGRTSRISSVGSQGSAVSRLSAISGVSRSPS PHRMLLETSFCGPKPVELGTSSAGGGGGGGSGASTAASSSHSQADGMPGAGTVAANAA LLEQLLLARKHDPTQAVLAEGIKVLPPAPATASAPSRSSRSRQPTANGEQRAAEKVKP TIGGQRRSTKSPGQMVVGKTASGTEYIRINLRPDHMYSDKGIASNERVVEAPNQLAPV YSKPASLSLQGTGTGGIEEHRLTPTASPKPGRRLTSRSPSPATGGGGGAGSSVSRKSS FSSLFRLGKDSPDSPRETARSRSKSKERPATASAGGAPGGGGSQNVTPSKQKSVLAIF KPGKRGSQSSKSSSPIESSLEPTAPPPPPPAPGSSAAGNRIRTPAGSRPGSRLRYYDE PVEGVIHIPLHTPPEEREARTLLQGIQQLTHAAQASMDPSPLPTHRGSSAAAAQAAGT QITATQLAAAAAALRPVAQRRQVAQRPDLDAIQSLPSQEEPPGMTPGEEQAPVPLQQP RGEQTNWSLEVQRHSSQDSQETTAESVGSVVSARAANLAQQRLPSVESTQSACEPRLV HTVATVNPAPHPNPDLETAAAKERRRLLFATRLGSGSQEQLFSTQFSISKTESQSSQL SEQVEHSGSETTTTDGLQRQGTVIRRMETSAPPPPPPRGVCSSEEEQGGGSGAGVSGV VMRSKHKSRPSSEDEAAPADLRHSRYLENFDVRRKLHENLTEAERGRVAELPGGGQVT IPRKPKRQSVPESRRETASYSSGTATPTTPTPTPTPLGPVGPAKQPPSAATTPTTGVP AVTSPPAAGTAQASTSAALKESPREPPSHRDQPMPMHDPLTSTTPPNATPPPPERRHS QSTDEHEPIESSESERDSDMAGSSSVTTAVPAGGEAGRRHHNFPRNVCVIEEHESTGL VSQESFEDELPYIPTTLPEERAQGVPIIPMRERANMELKTCPVDRPRSTTPLNPSHLE EYCTGIMTPQEVQPQEIDAPGCVAPVRGEKLRISLPRKESIGKERIQNSKSPRRVSNT SGKSWFEFAEEGLRGNNNLERKDSGKQLLPVVTPPPPPPPAASNLEEPKPKASTQRKL SGHWIDFENIPEKRKPAKRITTLPKETLTSSVAATATTASSAAACGSGHHRSGHHHHH QQLGSKANAEGGDKLHYNYVKPEDCQCECHEAERGESSIGTTGTAGAGGDTSTETGTG TGTGTGSESLASVEILQQGEDMLPLLEPDTSTEGRIYGDEEQVPLVRHSGKGISNPRT QHEEFPRRDDGSSPRNRRFPDRK" misc_feature 3241..>3474 /gene="LOC108054789" /note="multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit; Region: kgd; cl39092" /db_xref="CDD:476867" ORIGIN 1 gaattcccgg actgccggac tcccggagtt ggtgctccat ttaaaggata ttccatgccg 61 atgccgtggt gctcctgccg gaataaatag catcgaggag cggtactggt actggagaac 121 ggttgcggaa tggacgcgcg ccggcagaaa cgacttggcc cagcgccaat tgcatccttc 181 gaaaagtcat tcgaggacaa tgccacgacg actgcacagc tgcagagcca acatagccaa 241 caggagcaac agcatcacca tctccatcag catcctggcc atgcggcgat gatggagcaa 301 ggtgtgcgaa accagacaac gatgtcgacg acgacgaatc gcaatagaac cgccggcggc 361 atagaagcgc ccagcatagc cacggcatcc gcatctgcat ccgcgtccac atccgctaca 421 tccgcagcct ctgcggcatc cgcatccgca tcctcctcct cgtcgtcatc ggtttcatcg 481 gccacttgct cggcaacgat tgtccaggcg aagcagcgac ctccgccttt gaaaacggca 541 acgaccacgg tgaccaccac tttggtgagc agcagcgagg gcggccagcc cataccaccc 601 accgcccatt cgggtggggg tccaggtggt ccaggtggtc ctggaggtcc tggtggtgcc 661 agtgggagtg gcagttatcg cggtgccgcc accctgacca cgccctcaac gccccgcatc 721 gagctaagtc gcgcctccag ttcgtcgcat cacgaggagg acagccggga gagcagtccg 781 gagaatgtat tcgagcagga aacgattggc cttggctttc gggaggaggg cgccctcgag 841 ctgcgcagct ccaccgagga gctgtacttc atggatcccg agcagaagaa ggaggagcag 901 gagcggatcc agcagcagca gcagcaggcc aagcgctcct cgccgcacat cttcaagttc 961 gacgagcacc agagctacct gcagcagcac cagcgcaagg actcggcctc ctcggaggtg 1021 gcggccctgc tctgcatctc gggtcgcacc agtcgcatct cgagcgtggg cagccaggga 1081 tcggcggtga gtcgcctgtc cgccatatcg ggtgtctccc gttcgccctc gccgcatcgc 1141 atgctcctgg agacctcgtt ctgcggtccc aagcccgtcg agctgggcac gtcctcagct 1201 ggcggaggag gcggaggagg tagtggtgcc tccacggcgg ccagttcctc gcacagccag 1261 gcggatggaa tgccgggtgc cggcacagtg gcagccaatg cggcgctatt ggagcaacta 1321 ctcttggccc gcaaacatga tcccacccag gcggtgctcg ccgagggcat caaggtcctg 1381 ccccccgctc ccgctaccgc ttccgctccc agtcgcagca gcaggagcag gcagccaacg 1441 gcgaatggtg aacagagggc agcggagaag gtgaagccca caattggcgg acagcgaagg 1501 agcaccaaga gtcccggcca aatggtggtg ggcaagacgg ccagcggcac ggagtacata 1561 aggatcaatc tgcggccgga tcacatgtac agcgacaagg gcatcgcctc caatgagcgg 1621 gtggtggagg cgcccaatca gctggcacct gtttactcca agcccgcctc gctgagtctc 1681 cagggaacgg gtaccggtgg catcgaggag caccgcctga cgcccacggc gagtcccaag 1741 ccgggcaggc ggctgaccag caggtcaccc tccccggcca ctggaggagg cggcggagca 1801 ggttcatccg tttctagaaa gagctctttc agtagcctct tccgcctggg caaggactca 1861 ccggattcgc ccagggagac ggctcgttcg aggagcaaaa gcaaagagcg accggccacc 1921 gcctcggcag gaggtgcccc cggaggaggt ggctcccaga acgtaacgcc cagcaagcaa 1981 aagtccgtgc tggccatctt caagccgggc aagcggggca gtcagagcag caagagctcc 2041 tcgcccattg agagcagctt ggagccgacg gcgccaccgc caccaccgcc ggcaccaggc 2101 tcctccgccg ctggcaatcg gattcgcact ccagccggtt cccggccagg atcgcgtcta 2161 cgctactacg acgagcccgt ggagggggtc atacatatac cgctgcatac gccgccggag 2221 gagcgcgaag ctcgaaccct tctccagggc atccagcagc ttacccatgc ggcgcaggcc 2281 agcatggatc cctcgccgct gcccacccac cgtggctcct ccgccgccgc tgcccaggct 2341 gcgggaaccc agatcacggc cacccagctg gcggcggcgg cggctgcact gcgtccggtg 2401 gcccagcgca ggcaggtggc ccagcggccc gatctggatg ccatccaatc gctgcccagc 2461 caggaggagc cgccgggaat gactccggga gaggagcagg cgcctgtgcc gctccagcag 2521 ccgcgtggag agcagaccaa ctggagcctg gaggtgcagc gacacagctc gcaggactcg 2581 caggagacga cggccgagtc cgtgggctcg gtggtcagtg ccagggccgc caatctcgcc 2641 cagcagcgcc tgccctcggt ggagagcacg cagagtgcct gcgagccgag actggtgcac 2701 acggtggcca ccgtcaatcc agctccccat cccaatcccg acctggagac ggcggccgcc 2761 aaggagcgca ggcgcctcct gttcgccacc cgcctgggtt ccggcagcca ggagcagctc 2821 ttctccaccc agtttagtat ctccaagacg gagagccaat ccagtcagct gtcggagcag 2881 gtggagcact ccggttcgga gacaacgacc acggatgggt tgcagcgcca gggaaccgta 2941 atccggagga tggagacctc ggcacctccg ccgccaccgc cacggggagt ctgcagctcg 3001 gaggaggagc agggcggagg atcaggagca ggagtatcag gagtggtgat gcgttccaag 3061 cacaaatcgc gtcccagttc ggaggacgaa gctgctccgg cggatctgcg ccattcgcgc 3121 tacttggaga acttcgatgt gcgtcgcaag ctgcacgaga atctcacgga ggcggagagg 3181 ggacgagtgg ccgagctgcc aggtggtggt caggtcacca ttccccgcaa gccgaagcgt 3241 cagagtgtcc cggaatcaag acgtgagacc gcaagctata gttctggcac agccacgccc 3301 accactccca cacccacgcc cacgcccctg ggtccagtgg gtccagccaa gcagccaccg 3361 agcgcagcca ccactccaac cactggagtt cctgcagtga cctctccacc cgccgccggc 3421 accgctcaag cttccacctc cgccgccttg aaggagtcac ccagggagcc accttcccac 3481 agggatcaac ccatgccaat gcacgatcct ctgacctcca ccactccgcc gaatgccacg 3541 ccgccgccgc cggaacgtcg tcactcgcag tccacggacg agcacgagcc catcgagtcg 3601 tcggagagcg aaagggactc ggacatggcc ggcagctcgt cggtgaccac ggcagtgccg 3661 gcgggcggag aggccgggcg gcggcaccac aactttccgc gcaacgtgtg cgtcatcgag 3721 gagcacgaga gcaccggcct ggtgtcccaa gagtccttcg aggacgagct gccctacata 3781 cccaccacgc tgcccgagga gcgggcccag ggcgtgccca tcatcccgat gcgcgagcgg 3841 gccaatatgg agctgaagac ctgtccggtg gacaggccgc gatccacaac gccgctgaat 3901 ccctcgcatc tcgaggagta ctgcacgggc ataatgacgc cgcaggaggt gcagccgcag 3961 gagatcgatg caccaggctg cgtggctccg gtgcgcggcg agaagctgcg gatcagcctg 4021 ccgcgtaagg agtccatcgg caaggagcgc atccagaact ccaagtcgcc gcgtcgcgtc 4081 tccaacacca gtggcaaatc ctggttcgag ttcgccgaag agggtttgcg tggcaacaac 4141 aatctggagc gcaaggactc cggcaagcag ctgctcccgg tggtcacgcc acctccgccg 4201 ccgccgcctg ctgcctcgaa tctggaggag cccaagccga aggcatccac ccagcgaaag 4261 ctctccggcc attggatcga tttcgagaac atacccgaga agcggaagcc cgccaagcgg 4321 atcaccacgc tgcccaagga gacgctgacg agcagtgtgg ccgccacggc caccaccgcc 4381 tcctccgccg ccgcctgcgg cagtggtcac caccgctccg gccaccatca ccatcatcag 4441 cagctgggat cgaaggcgaa tgccgagggc ggcgacaagc tgcactacaa ctacgtgaag 4501 ccggaggact gccagtgcga gtgccacgag gcggagcgcg gcgagtcgtc gattggaacg 4561 acgggaacgg caggagccgg cggagatacc agcacggaga cgggcactgg cacgggaacc 4621 ggaacgggca gcgagtccct ggcctccgtg gagatactgc agcagggcga ggacatgttg 4681 ccgctgctcg aacccgacac ctcgacggag ggcaggattt acggggacga ggaacaggtg 4741 ccactggtgc gtcactctgg caagggcatc tccaatccca ggactcaaca cgaggagttt 4801 cctcgtcggg atgacggatc aagtcctcgg aatcgtcggt tccccgacag aaagtaagca 4861 gtctcatttc gattctcgga ctggatcggt tctttatata gatcttcagg gtagctaagc 4921 cggtaatcta tctctatgta agtcgagtca ctaaactaag ggcctcctgg cctatatcct 4981 taatgtacct caagcagagt ggttgttaaa cgttcagagg ccgagggaca atgatcgcta 5041 gacaatgatg cgtattacct ttcgactcga ttactcgtag ctaaagaaaa ataaacaaaa 5101 caagacgtaa acgctatatg gaaactctat atacaaaaca aaagaaatat actttaaaac 5161 cacatacgat aatatgcata cgatactcgg aacatacgat acatatttag ctcatgaatg 5221 tacatggtta gggtaatttt tttgatagca acaattacaa acactcactc tacatacata 5281 tatagcaatc ctgacttttc gctggcaatt tttactatat gtgatctcag ataaagtgtt 5341 ggacatccga tcggattctc tagctgtaag tcggtgtatt tgtgtgtagt ttgttaacta 5401 gctccggagt ccggaatcca gaatccagag tccctaggct tagtcactcc aatcttgaca 5461 tatatataca tttgtatatc gtcgtctgtg cccgtttgtg tgtgtgtgag tgtgtgtgtt 5521 ttggagatct ataaatagat ataactctct gtaacaccac cttcgcgatt tcgacccata 5581 tctctaggat ctcttacgat gaaacacact gaacgatcta tgaaacgagt tgtaatcgtt 5641 ttcagttgat caaagtcaaa caaagcaaaa aaaacacaaa aagtagcctg atgcatagcc 5701 tttagtttag ttgagttcga attcgaagcg ttagttagtt agtcagcccc gattttgccg 5761 ggcgtgttgt aaatacataa gtctaaacta gagaacagta ttcgatacaa agggtttttg 5821 gcattttttt tccgccaaaa gtttgtgaac tttaaaatga gtttattata tatacatgaa 5881 tattactata aagccaacaa actgccagca cacacacact tgccatagga gaagttcctt 5941 ttttgctttt cgtttttagt tttttcgggg gtaacctgtt tggtgacccc gaccccggtt 6001 tatgcgcccc aagaaatcac gatacgaata cgacctataa actagcttag ccgaaagatg 6061 ttttccctca cttactatca tacgaagtaa aaaaacacta cctagctagc ctttgaaatt 6121 cctaaatact ttattgaact tagcggacaa cggacattca ttgaattgaa gcaaaatcaa 6181 gcaaataaaa tttaaattaa tattaatgca acttaaggaa aaacatatag gtaaattata 6241 caatacataa actacactca g