PREDICTED: Drosophila takahashii methylcytosine dioxygenase TET

LOCUS       XM_044395773            1644 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108055504), mRNA.
ACCESSION   XM_044395773
VERSION     XM_044395773.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1644
                     /gene="LOC108055504"
                     /note="methylcytosine dioxygenase TET; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:108055504"
     CDS             1..1644
                     /gene="LOC108055504"
                     /codon_start=1
                     /product="methylcytosine dioxygenase TET"
                     /protein_id="XP_044251708.1"
                     /db_xref="GeneID:108055504"
                     /translation="MKDSNSSSNISSSNAAGMPCSAGGGGAVTTAGGATTGSATPTAP
                     STPTTAAAAAVSAADPTAAAAAAQNPQQRSKSNIHELRNQDYVSRLMAATPPYLYSAP
                     VGPNNFFFSDMLRSLVQARNNETARVLQLQQQQQQQAQQQQQQQQQHQAALVRRPRKR
                     SWSYRPYYEQLRERRDAEEKQQQQQQQQQHHQQQQQHHQQHQQQMAPEKPLELTNKAI
                     TPYGYAKMEAKPPITPTATATAAAPPTSTTGNNKTGGGLVDSSLQDNTPPAASLPPQD
                     LVLPPPPPVWYPPLYAPYGIDPLHFFIDLRVSGHIYDRKKENVSPLSSSNNAIAEEGS
                     PGSCSSSGASGSASALATGNLLSKQRHGSAFTVPIPKAAQNDAINLCANSAAAGAGAT
                     STSLGSKFEHYAKYYDLGETKENHPSSTAANLSAAAAAAAAAANLSKSGASYMLQHLP
                     RLYSQFAAHQAQAQSQDTDAKSESASVTASLSAPDLCDEDSLGRNSSDTGNGLEGTSQ
                     GGQGNCDIDVEIIDSIKYRTDGESSRCSSNDEASITQID"
ORIGIN      
        1 atgaaggaca gcaacagcag cagcaacatc tcgtcgagca acgcagcagg gatgccctgt
       61 tccgccggtg gaggaggagc agtgactacg gcaggtgggg caaccactgg cagtgccacg
      121 cccactgcgc ccagtacgcc cacaacagca gcggcggcgg cagtaagtgc ggcagacccg
      181 acagcagcag cagcagcagc tcaaaatccg caacagcgca gcaagagcaa catccacgag
      241 ctgaggaatc aggactacgt cagtcgccta atggccgcca ctccaccgta tttgtactcc
      301 gcacccgtgg gaccgaataa tttcttcttc agcgatatgc tgcgctccct ggtccaagct
      361 cgaaataatg agacggcccg agtgttgcag ctgcagcagc aacagcagca gcaggcgcag
      421 cagcaacaac agcagcagca gcaacaccag gctgccctgg tgaggcggcc caggaagcga
      481 tcctggtcgt atcgtcccta ctacgagcag ctaagagagc gtcgcgatgc cgaggagaag
      541 cagcagcagc agcaacagca acagcaacac catcagcagc aacagcaaca ccatcagcaa
      601 catcagcagc aaatggcgcc cgaaaaacct ctggagctca ccaataaagc cataacgccg
      661 tatggttatg ccaaaatgga ggccaagcca cccataacac caacggccac ggctacggca
      721 gctgcaccac caactagcac cactggtaat aataagaccg gcggtggttt ggtggacagc
      781 agcctgcagg ataacacacc gccggcggcc tcgttgccac cgcaggattt ggtccttcca
      841 ccaccaccac ccgtttggta tccaccactc tatgcgccct acggcatcga tccccttcac
      901 ttcttcatcg atctgcgcgt ttcggggcac atctacgatc gcaagaagga gaatgtctca
      961 ccgctttcaa gcagcaacaa tgcgattgcc gaggagggtt cgcccggctc gtgttccagt
     1021 tcgggcgcca gtggttccgc ctccgctttg gccaccggta acctactgag taagcagcga
     1081 catggctccg cttttacggt gcccattccc aaggcggcgc aaaatgatgc aatcaatctg
     1141 tgcgccaatt cggcggctgc gggtgcaggt gcaacatcca cctcattggg cagcaagttc
     1201 gagcactacg ccaagtacta cgatctgggc gagaccaagg agaaccatcc atccagcacg
     1261 gctgccaatc tctccgcggc cgctgctgcc gccgctgcag ctgcgaatct atcgaaatcg
     1321 ggagccagct acatgttgca acatctgccg cgactctaca gccagttcgc cgcccatcag
     1381 gcgcaggccc agagccagga tacggatgcc aagtcggagt ccgcctcggt aacggcctca
     1441 ctttcggcgc ccgatctctg cgatgaggat tcgctgggcc gcaattccag tgacaccggc
     1501 aacggcttgg agggcaccag ccagggtggt cagggtaatt gcgacatcga tgtggagatc
     1561 attgactcca tcaagtaccg cacggatggc gagagcagcc gctgttccag caacgacgag
     1621 gcctccatca cacaaatcga ttga