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LOCUS XM_044395535 5501 bp mRNA linear INV 09-DEC-2024 variant X3, mRNA. ACCESSION XM_044395535 VERSION XM_044395535.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044395535.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5501 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5501 /gene="shakB" /note="shaking B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108062291" CDS 265..1383 /gene="shakB" /codon_start=1 /product="innexin shaking-B isoform X2" /protein_id="XP_044251470.1" /db_xref="GeneID:108062291" /translation="MLDIFRGLKNLVKVSHVKTDSIVFRLHYSITVMILMSFSLIITT RQYVGNPIDCVHTKDIPEDVLNTYCWIQSTYTLKSLFLKKQGVSVPYPGIGNSDGDPA DKKHYKYYQWVCFCLFFQAILFYTPRWLWKSWEGGKIHALIMDLDIGICSEAEKKQKK KLLLDYLWENLRYHNWWAYRYYVCELLALINVIGQMFLMNRFFDGEFMTFGLDVIDYM ETDQEDRMDPMIYIFPRMTKCTFFKYGSSGEVEKHDAICILPLNVVNEKIYIFLWFWF ILLTFLTLLTLIYRVVIIFSPRMRVYLFRMRFRLVRRDAIEIIVRRSKMGDWFLLYLL GENIDTVIFRDVVQDLANRLGHNQHHRVPGLKGEIQDA" misc_feature 325..1323 /gene="shakB" /note="Region: Innexin; pfam00876" /db_xref="CDD:459975" polyA_site 5501 /gene="shakB" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgagtcccga ttagccgatg cgccgataat gggcctgccg cgcaagagaa agcacagcca 61 ggaatcggga gcacaatcga tcgatagcca cacgatactc tgatattttc gatattctcg 121 ataccctgat actatcgata ttatcgatag gacaacacaa accaatcgat aacacaaaac 181 cacactcaaa aacgaaacac tgaaacgaag agaggccaga gagaatcatc gccgatcttt 241 gccagcctgc gctgacgaaa aaccatgtta gatatatttc gtggattgaa aaaccttgta 301 aaggtcagtc acgttaaaac cgattcgata gtattccgcc tgcactactc aataactgtg 361 atgattctga tgtcattctc gctaattata accacacgcc agtacgtggg caatccgatc 421 gattgtgtgc acaccaaaga tattccagag gatgtgctga acacgtactg ctggatccag 481 tccacctaca cgctcaagag cctcttcctc aagaagcagg gcgtgtcggt cccgtatccg 541 ggcatcggca actccgacgg cgatccggcg gacaagaagc actacaagta ctaccagtgg 601 gtctgcttct gcctcttctt tcaggcaatc ttattttata caccaagatg gctgtggaaa 661 tcttgggagg gtggcaagat tcatgcgctc atcatggact tagacatagg catttgttcc 721 gaagccgaga aaaaacaaaa aaagaaatta cttttagatt atttgtggga aaatttaaga 781 tatcacaatt ggtgggcgta cagatattac gtgtgtgagc tgctcgccct tataaatgtg 841 ataggtcaaa tgtttcttat gaatcgattt ttcgatggcg aatttatgac atttggcctg 901 gatgtgatag attatatgga gaccgatcag gaagatcgca tggatccgat gatttacata 961 tttcccagaa tgaccaaatg tacatttttt aaatacggtt caagtgggga ggtggagaaa 1021 cacgacgcca tttgcatttt accattaaac gttgttaatg agaagattta cattttcctt 1081 tggttttggt ttatattatt aacgtttctc acattattaa cgctaatata cagggtggtt 1141 attatattct ctcctcggat gagggtctac ttatttcgta tgcgatttag gttagtgcgt 1201 cgtgacgcta ttgaaataat cgttcgtcgt tcgaagatgg gcgattggtt tttgttgtat 1261 ttactaggtg aaaacataga tacagttata tttcgtgatg ttgtacagga cttagcgaat 1321 cgtttaggac ataaccaaca ccacagggtg cctggcttga aaggtgaaat acaggatgca 1381 tgatattggg agtattagaa gcaatacaaa atgcaatttg tcgtctccat ttgaaaacca 1441 tcgaaatcaa caacaataag tgtcagaaca acgactcgaa aaacaagact aagaaatgaa 1501 aattacaacc acaaaggaat ctagagatct tcgcagcagc cgcttcataa acaaactcaa 1561 aactcaacac acacaccgct aaaaaatctt taaaaaacgt atctcaaaaa tacaaccaaa 1621 aaaactatcg tcagctcgca gtcagtcatc aaaaatcagc attaaatcag ctcagccatg 1681 gagaccacga tcgatagtcg atagtcgata cagcaggaaa agcacacatc caaaaaccac 1741 aggagaaatg aacaggaaat aaatggaagc ggaatgaaag cagggagaaa tatggaaaaa 1801 ataggaaaac atcaacagcc acgcaacgaa aggaatttta agtaaataaa aaaatcaaat 1861 taacgagaaa atcgataaac gataatggac agaggataac aatcgaggaa gacaggatcg 1921 ccaggccggt ggcaagtagc gcctgccgtc ggccaggggt cacaaggtca caaggtcact 1981 acgtcacaag ggatcgcctg ggaaatcaga gtcagcgatc agcgacccat agaaaagttg 2041 ccccaaggac aaggtcaaag tgtgaggaaa cggaaacgga agccacagac agacacacac 2101 acatacacac acacacgacg ttacatacac ataaccacgc ttacagcgac atcactcata 2161 cgccccgtag aacacacaca cacatcgcac tttgcttgtc atgcagcgtt aactaaacca 2221 aacatcaaca aagtcgagac gacgcccgcg gaaaattgca tttctgtatt aacccaataa 2281 aaaagaatga aaaatcgaag atcagcatca ctttcaccga ggagaagcac aggaaacgag 2341 atgctacagc cacaacatct gaggtaaaac aacaacaaaa gcaagagacg aagagcagca 2401 aatgaaagtc aagaaaatcg cagaaggaag aggaggaaat cgcagagaag agcaacagtt 2461 taattaaatt aaattcaatt caattaaatt acttattaca atgatatctt gaagtgttca 2521 tgtattcgaa tgtaggttaa ctaagtcaag catacaaata attctataca tatatgtata 2581 atatatatat tatatatata tatagacaac aacaaacatt tttttttcta actctaagca 2641 tttgtattac ccgctaaaca aatgaacaaa acaaaacgaa acaaaacaaa agataaaaaa 2701 caatgaaaaa tcaaccaaaa aaaagcaaac cgaaaaacag aattttttgt atacagaaat 2761 gaaagaaaaa attgagcaga tagaatataa taacgataaa gaaaagagaa aagagaaaag 2821 aaaagaaaga aaaaagccga ggagaaacga acagaaaata tcagtaaata tcaagaaagt 2881 tcagaaaata ccataccgaa taccgaaaaa aaccgaaaac aaaagataca tttacatagt 2941 ttatttagaa gaaactatag cgcgcatcat tatataaccg aaaatcgaag atcgaaaaac 3001 tgaaaaggga aaactgaaaa ccgacccaac tcacaaaaaa caaagacaaa cagacagacg 3061 gaaatgtttt aagctcaccc acacacagac actctcacac acacacatat agcatgtaaa 3121 gcatatatat atatataaat ttatcgatcg atcattcagc aaagagaaga agaagagcag 3181 ccaacattcg cagcataaat caattaactc cactaataat agagcatact caactctctc 3241 aactctctct ctctctctac gaaaaatacg cctagtactc agaagcggaa aatgcgaaaa 3301 ttgcccagga aaactcaaaa gcacacgctt tgccacatga atcaagtgta aacataacga 3361 taataatgat ataataccgc tagcgaataa agtcccaaaa atcgagaggt tctaagatca 3421 gatgtgggag attccccagt tcgacagtca gtatgtatgt gtgggcattg caggtggcct 3481 acagtgaagc cttcctaaat gagacccatc cgaaggttag tcttcacccc gaaccacaaa 3541 gtcatcatca taacaatatg tgctacaaat cgtaatatcc gtccagaaaa ccttttgaag 3601 cgcacctctc ttgagttttt atatccgatc tctctgtctc tcttttggat ccccgatcca 3661 tccgacttcc gtataaccca aagaaatgga ccaacacctt gcctttttcc catctctcaa 3721 aggacgacca aaaaaataca atacacagcc agaaaaagcc aagccagaga tctaataaat 3781 ctaacaacaa atgtcactgc caacaaaacc agttaaaaag taaaatcaag taaaaaatag 3841 ttaaaatgta aatgggagag gttcttgaag ggttttagat aggttctttc gtgggtttcc 3901 caccctgcaa tgcccaaaag tacacagtga acccagaaac agaaacagaa acatggatag 3961 caaaaggaat ttaccccaga agaagattgt tcctgaacca ggaattgccg aaaatcctgc 4021 tcattccttt cgggaatcac ttttcgattt cgaatcatct gaatatgatt atgattctga 4081 tttgagcgct tctttccgtc tactcacact actcagcata ctcagcaagg acgcattacg 4141 atttagaggg agtgaaaagt gaaagttgaa gagaaggtta aagagaaggt gaaggtggga 4201 gaaagtgggg gtaaggttga agcgaaaaaa caataaatgt aacaataaat ggtaataagt 4261 aattttagcg tacgtctttt tttttaacag cttatagcca actaagtgaa gtaattgtaa 4321 ttctagttca aactgaacca tttttgtctg cgtttttttt tgtcgtggat tcgtaggtta 4381 agtcacacac acactcatgc agcatacaca cacacacaca acacacaaag aaaacggtaa 4441 acgaaaagca aaatgtataa atatcgagga tacttacact gtaattatag ggggcgaatt 4501 aagaaggaat accataccaa aacgtaagca tattacaagg aaattgccat tagtcgatat 4561 tgttaaagcg atacgtatat gatctacaat gctaggctaa tgaaaaacca aaaaaaagaa 4621 agaggaagga aaggaatact tagtgtagct caagatggaa tctctcgtat ctcgtaactc 4681 gtaactccaa ctaaaagcaa ttgtaaaata tcgtaacaga tctgaaggcg atcgaacaaa 4741 caaacaaaag caaatgcaaa cgaacaaaac gaacgcaaga ctttattttt caaagtgttt 4801 gccgcaatat aaaataataa tataatataa tatgtaatga taactcgaag aattcgaaat 4861 gtactagctg aatgtagagg ttaagaagga catttcatag acgcaatcct agaagcaata 4921 agcacgggcc gaaacggaaa tgaaaagcag aaacggaagc ggaaaaggaa acgaaaaagg 4981 aaacggaaac aggcagagct aacgataaca tcgatgactt ttcaccacgt ttcaccactt 5041 ccggtacagt tatgtccact tctcaccaca ccgcacggca cttctctctc tctctctctc 5101 tctctctctc tctctatcac acaccctctt atcccgtctc ttttccactg aaaaaccctt 5161 ttcacactcc atatagcctg tttccactac aaatagcggt ggagacaggc tatcattctt 5221 gtatgacctg ttttaaaaat tccaaaaaaa gtaacctgga atattctgta ttcgaatctc 5281 aattaatatt tgtgtttgtt tgttcatttg tttgtccatt tgtttgttgg tttgttcccg 5341 gtctgaatcg gaatctgaat tcggtttctg ccatattgtt tgtgtataat tattatgtat 5401 tctttggtgg ctaagttaag gctttagttc tgtaacttct accgtacttt ctcactcatt 5461 tgttctttcg tgcaataaaa acgagacttg tatacatatc a