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LOCUS XM_044395532 7520 bp mRNA linear INV 09-DEC-2024 variant X2, mRNA. ACCESSION XM_044395532 VERSION XM_044395532.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044395532.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7520 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7520 /gene="shakB" /note="shaking B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108062291" CDS 2269..3402 /gene="shakB" /codon_start=1 /product="innexin shaking-B isoform X1" /protein_id="XP_044251467.1" /db_xref="GeneID:108062291" /translation="MEFLRGVYAFMQVSRSSVSHVKIDSPVFRLHTNATVILLITFSI AVTTRQYVGNPIDCVHTRDIPEDVLNTYCWIHSTYTVVDAFMKKQGSEVPFPGVHNSQ GRGPLTIKHTKYYQWVAFTLFFQAILFYTPRWLWKSWEGGKIHALIMDLDIGICSEAE KKQKKKLLLDYLWENLRYHNWWAYRYYVCELLALINVIGQMFLMNRFFDGEFMTFGLD VIDYMETDQEDRMDPMIYIFPRMTKCTFFKYGSSGEVEKHDAICILPLNVVNEKIYIF LWFWFILLTFLTLLTLIYRVVIIFSPRMRVYLFRMRFRLVRRDAIEIIVRRSKMGDWF LLYLLGENIDTVIFRDVVQDLANRLGHNQHHRVPGLKGEIQDA" misc_feature 2341..3342 /gene="shakB" /note="Region: Innexin; pfam00876" /db_xref="CDD:459975" polyA_site 7520 /gene="shakB" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccgaaacaga agaagaaaag tcgaggagtc gtgtcgagat cgaagcgccg aacggaacgg 61 aacggaacga actgagctga acggaagtgc agtgcaaagc ggaaacggaa gctggagcag 121 tattcccact tagtgcttgg cacgcacaca cgctaactgg cacgcacact cacacacaca 181 cacacactct gtcaagtttg gcggggttcc ccgattgtat tcttcgtgtg ttcactttct 241 tattattatt gtaatatata atttttctta attaacaacg cgcgaaagcg atcgaatttt 301 tttgcaaatt tttttaacgt gctctctttc catataaaaa aaaaaacaac aaaatataaa 361 caaaatgtat aaaaaataaa aaacgacaac ccttaacagc agcgagaaca acaacgtgcg 421 gtgttgtgag cttgccgcta aaatcaaatg aaagtccaag ccaagcgaaa gtcgacgaat 481 aaagtggcaa tatgcagtgc gtgtgcatag aaaaaccaga tatacagcgg ccacagggta 541 aagtactttg gacaagtgtc aaatccccga aacgccagtg aaagaaagaa agaaaatcga 601 aggaaaaatc aacatacagc agcatacgca gagaaaatcg ctggaaaacc ggacaaaatg 661 tttggcagcc aaagtggctg cctttgaggc tgagtgagtg gctcaagcac gaagaccttt 721 tttaagacag aaagcctaga gaaactagaa aaagtgcaga aagagaaatt tcgaattatt 781 acgagaatct tcttatattt gaaatatttt caaattcaaa tttaaataac tttattctta 841 ataaaaacta attgataatt aattacataa tagtaaacaa agctcaaata gactgaaata 901 gagtccaaat atattacgaa agtaaaatgc aattaattca acatatcata taaattaatt 961 agaacaaatt gcatttaagt tataaaacaa agcgaaagca aaacaaaaca acaagcgtat 1021 aataattaca cgcaaacaaa gggcaggaaa aatcgaatga acaaaagtca aaaaataaac 1081 acgcaaaaaa agggcgaaaa gtgagcgaga gaaaaaataa taaaaagaga tcaatgtgca 1141 aaaagtgcta aggaggagaa gaagaaccaa taacccatat aaaatactgt aaaattcgcc 1201 gtttagttcg cgtttcaatt aaatttaata ataaattact atgctaaatc caaggacata 1261 aatggatcat caatcgtaga ggcagccgaa aagaaaataa gatcgtcaag tgtctatgag 1321 gacaactgaa agaattttgt tttttttttt tgggccgtgg ctccaactgc ccacaggagc 1381 aagtgagacg gcagtagaca gagtgcgaca gagagagggc gatacagatg tgcgagcggc 1441 ggaatccgga ctccgggggg ttgagacggt gaaggtgagc aggtgaaggt gcccagaagg 1501 acgcaggacg acgaagagga ccatggattg gacccggtgg caaatggcca gagaaagagc 1561 tggcaaccct ggacaagtca ggaacaaccc tgggcgcaag gattgcgatc gcgagacccg 1621 attggagtgt ttgcccattt gattcgttgc ggcttcacac gtaggttcta tcagtcagcc 1681 agtcagtcag tcagtcaatc agtcagtcag tcagtcagtc acccactcaa taaatcaatc 1741 gtgccacagt gctcgattgt cgttgtcccc ctcaaatcat catcagttga aaacagaaat 1801 acaatagcaa gcgatcaaga catgcacatt actgtaaata ctcaaaacta gtttcataaa 1861 caaaaaacca aggaaatata caaaaacccg aaaaccaaaa agtaaatata aaaaagtgca 1921 gtgttcagtg ttcgacgaca aagggaaaaa gagacggcag aggaaaatcg agtggggaaa 1981 aaccgaaaag tgagagggcg gccgagggct gccccgcaac aactgaaaaa ccaaaaaaaa 2041 aatcgacaac ctacaaatca acaataacaa caacaacagc ataacgcccc caacactgcc 2101 aatgccattg ccattatcaa gaacaacgtt cgttcatcat cgttcgttta gatttgacac 2161 aaggtactat cacgcaaact aaagccacat cttgttgcgg acaccgttaa gcagtatata 2221 agtcgggccc aacgcacaac caaaaagggt tctcaagagc agcaaaatat ggagttttta 2281 cgcggcgtct atgcgtttat gcaagtgagt agatcatcgg tgtctcatgt caaaatcgat 2341 tcacctgttt ttcgcctgca caccaacgca acggttatat tactgatcac attctcgatt 2401 gctgtgacga cgcggcagta cgtaggaaat cccatagact gtgtacatac aagagacatt 2461 cccgaagatg ttctcaacac atattgttgg atacactcaa cgtatacagt ggtcgatgcg 2521 tttatgaaga agcaaggttc cgaggtgcct tttcccggag ttcacaattc acagggccgc 2581 gggcctctaa caataaagca cacaaaatat tatcaatggg tagcgtttac actatttttt 2641 caggcaatct tattttatac accaagatgg ctgtggaaat cttgggaggg tggcaagatt 2701 catgcgctca tcatggactt agacataggc atttgttccg aagccgagaa aaaacaaaaa 2761 aagaaattac ttttagatta tttgtgggaa aatttaagat atcacaattg gtgggcgtac 2821 agatattacg tgtgtgagct gctcgccctt ataaatgtga taggtcaaat gtttcttatg 2881 aatcgatttt tcgatggcga atttatgaca tttggcctgg atgtgataga ttatatggag 2941 accgatcagg aagatcgcat ggatccgatg atttacatat ttcccagaat gaccaaatgt 3001 acatttttta aatacggttc aagtggggag gtggagaaac acgacgccat ttgcatttta 3061 ccattaaacg ttgttaatga gaagatttac attttccttt ggttttggtt tatattatta 3121 acgtttctca cattattaac gctaatatac agggtggtta ttatattctc tcctcggatg 3181 agggtctact tatttcgtat gcgatttagg ttagtgcgtc gtgacgctat tgaaataatc 3241 gttcgtcgtt cgaagatggg cgattggttt ttgttgtatt tactaggtga aaacatagat 3301 acagttatat ttcgtgatgt tgtacaggac ttagcgaatc gtttaggaca taaccaacac 3361 cacagggtgc ctggcttgaa aggtgaaata caggatgcat gatattggga gtattagaag 3421 caatacaaaa tgcaatttgt cgtctccatt tgaaaaccat cgaaatcaac aacaataagt 3481 gtcagaacaa cgactcgaaa aacaagacta agaaatgaaa attacaacca caaaggaatc 3541 tagagatctt cgcagcagcc gcttcataaa caaactcaaa actcaacaca cacaccgcta 3601 aaaaatcttt aaaaaacgta tctcaaaaat acaaccaaaa aaactatcgt cagctcgcag 3661 tcagtcatca aaaatcagca ttaaatcagc tcagccatgg agaccacgat cgatagtcga 3721 tagtcgatac agcaggaaaa gcacacatcc aaaaaccaca ggagaaatga acaggaaata 3781 aatggaagcg gaatgaaagc agggagaaat atggaaaaaa taggaaaaca tcaacagcca 3841 cgcaacgaaa ggaattttaa gtaaataaaa aaatcaaatt aacgagaaaa tcgataaacg 3901 ataatggaca gaggataaca atcgaggaag acaggatcgc caggccggtg gcaagtagcg 3961 cctgccgtcg gccaggggtc acaaggtcac aaggtcacta cgtcacaagg gatcgcctgg 4021 gaaatcagag tcagcgatca gcgacccata gaaaagttgc cccaaggaca aggtcaaagt 4081 gtgaggaaac ggaaacggaa gccacagaca gacacacaca catacacaca cacacgacgt 4141 tacatacaca taaccacgct tacagcgaca tcactcatac gccccgtaga acacacacac 4201 acatcgcact ttgcttgtca tgcagcgtta actaaaccaa acatcaacaa agtcgagacg 4261 acgcccgcgg aaaattgcat ttctgtatta acccaataaa aaagaatgaa aaatcgaaga 4321 tcagcatcac tttcaccgag gagaagcaca ggaaacgaga tgctacagcc acaacatctg 4381 aggtaaaaca acaacaaaag caagagacga agagcagcaa atgaaagtca agaaaatcgc 4441 agaaggaaga ggaggaaatc gcagagaaga gcaacagttt aattaaatta aattcaattc 4501 aattaaatta cttattacaa tgatatcttg aagtgttcat gtattcgaat gtaggttaac 4561 taagtcaagc atacaaataa ttctatacat atatgtataa tatatatatt atatatatat 4621 atagacaaca acaaacattt ttttttctaa ctctaagcat ttgtattacc cgctaaacaa 4681 atgaacaaaa caaaacgaaa caaaacaaaa gataaaaaac aatgaaaaat caaccaaaaa 4741 aaagcaaacc gaaaaacaga attttttgta tacagaaatg aaagaaaaaa ttgagcagat 4801 agaatataat aacgataaag aaaagagaaa agagaaaaga aaagaaagaa aaaagccgag 4861 gagaaacgaa cagaaaatat cagtaaatat caagaaagtt cagaaaatac cataccgaat 4921 accgaaaaaa accgaaaaca aaagatacat ttacatagtt tatttagaag aaactatagc 4981 gcgcatcatt atataaccga aaatcgaaga tcgaaaaact gaaaagggaa aactgaaaac 5041 cgacccaact cacaaaaaac aaagacaaac agacagacgg aaatgtttta agctcaccca 5101 cacacagaca ctctcacaca cacacatata gcatgtaaag catatatata tatataaatt 5161 tatcgatcga tcattcagca aagagaagaa gaagagcagc caacattcgc agcataaatc 5221 aattaactcc actaataata gagcatactc aactctctca actctctctc tctctctacg 5281 aaaaatacgc ctagtactca gaagcggaaa atgcgaaaat tgcccaggaa aactcaaaag 5341 cacacgcttt gccacatgaa tcaagtgtaa acataacgat aataatgata taataccgct 5401 agcgaataaa gtcccaaaaa tcgagaggtt ctaagatcag atgtgggaga ttccccagtt 5461 cgacagtcag tatgtatgtg tgggcattgc aggtggccta cagtgaagcc ttcctaaatg 5521 agacccatcc gaaggttagt cttcaccccg aaccacaaag tcatcatcat aacaatatgt 5581 gctacaaatc gtaatatccg tccagaaaac cttttgaagc gcacctctct tgagttttta 5641 tatccgatct ctctgtctct cttttggatc cccgatccat ccgacttccg tataacccaa 5701 agaaatggac caacaccttg cctttttccc atctctcaaa ggacgaccaa aaaaatacaa 5761 tacacagcca gaaaaagcca agccagagat ctaataaatc taacaacaaa tgtcactgcc 5821 aacaaaacca gttaaaaagt aaaatcaagt aaaaaatagt taaaatgtaa atgggagagg 5881 ttcttgaagg gttttagata ggttctttcg tgggtttccc accctgcaat gcccaaaagt 5941 acacagtgaa cccagaaaca gaaacagaaa catggatagc aaaaggaatt taccccagaa 6001 gaagattgtt cctgaaccag gaattgccga aaatcctgct cattcctttc gggaatcact 6061 tttcgatttc gaatcatctg aatatgatta tgattctgat ttgagcgctt ctttccgtct 6121 actcacacta ctcagcatac tcagcaagga cgcattacga tttagaggga gtgaaaagtg 6181 aaagttgaag agaaggttaa agagaaggtg aaggtgggag aaagtggggg taaggttgaa 6241 gcgaaaaaac aataaatgta acaataaatg gtaataagta attttagcgt acgtcttttt 6301 ttttaacagc ttatagccaa ctaagtgaag taattgtaat tctagttcaa actgaaccat 6361 ttttgtctgc gttttttttt gtcgtggatt cgtaggttaa gtcacacaca cactcatgca 6421 gcatacacac acacacacaa cacacaaaga aaacggtaaa cgaaaagcaa aatgtataaa 6481 tatcgaggat acttacactg taattatagg gggcgaatta agaaggaata ccataccaaa 6541 acgtaagcat attacaagga aattgccatt agtcgatatt gttaaagcga tacgtatatg 6601 atctacaatg ctaggctaat gaaaaaccaa aaaaaagaaa gaggaaggaa aggaatactt 6661 agtgtagctc aagatggaat ctctcgtatc tcgtaactcg taactccaac taaaagcaat 6721 tgtaaaatat cgtaacagat ctgaaggcga tcgaacaaac aaacaaaagc aaatgcaaac 6781 gaacaaaacg aacgcaagac tttatttttc aaagtgtttg ccgcaatata aaataataat 6841 ataatataat atgtaatgat aactcgaaga attcgaaatg tactagctga atgtagaggt 6901 taagaaggac atttcataga cgcaatccta gaagcaataa gcacgggccg aaacggaaat 6961 gaaaagcaga aacggaagcg gaaaaggaaa cgaaaaagga aacggaaaca ggcagagcta 7021 acgataacat cgatgacttt tcaccacgtt tcaccacttc cggtacagtt atgtccactt 7081 ctcaccacac cgcacggcac ttctctctct ctctctctct ctctctctct ctctatcaca 7141 caccctctta tcccgtctct tttccactga aaaacccttt tcacactcca tatagcctgt 7201 ttccactaca aatagcggtg gagacaggct atcattcttg tatgacctgt tttaaaaatt 7261 ccaaaaaaag taacctggaa tattctgtat tcgaatctca attaatattt gtgtttgttt 7321 gttcatttgt ttgtccattt gtttgttggt ttgttcccgg tctgaatcgg aatctgaatt 7381 cggtttctgc catattgttt gtgtataatt attatgtatt ctttggtggc taagttaagg 7441 ctttagttct gtaacttcta ccgtactttc tcactcattt gttctttcgt gcaataaaaa 7501 cgagacttgt atacatatca