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LOCUS XM_044395234 4257 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_044395234 VERSION XM_044395234.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044395234.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4257 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4257 /gene="Klp3A" /note="kinesin-like protein 3A; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108055808" CDS 406..4077 /gene="Klp3A" /codon_start=1 /product="chromosome-associated kinesin KIF4 isoform X1" /protein_id="XP_044251169.1" /db_xref="GeneID:108055808" /translation="MSGEDPSSVAVALRVRPLVQSELDRGCRIAVERSADGAPQVTVN RTEAYTYNNVFDIGDTQKDIFESCVQGKVQKLLHGYNVTILAYGQTGSGKTYTMGTAF NGVLDDHAGVIPRAVHDIFLAIEDMREEFRFAVTCSFVELYQEQFFDLFSSQKREKAT VDIREVKNRVVMPGLTELEVKSAQEVTDHLMRGSAGRAVAATAMNETSSRSHAIFTLT LVATKLDGKQSVTTSRFNLVDLAGSERCSKTLASGDRFKEGVNINKGLLALGNVINAL GSGQAAGYIPYRQSKLTRLLQDSLGGNSITLMIACVSPADYNVAETLSTLRYADRALQ IKNKPVVNLDPHAAEVNMLKDIIQKLRVELLAGGKMSSSITSAVGAAGLGSLSGEESL AGSMANAAENQRLKEQVRSLLDRNRKLQQELHHSLVDLTEKEMRAHIAEQAHDKLRVH VVQLKKQLNLKEGDAELREISQLVDLVDDELQRTQEELESQGQETRQQLSSRSQSERD GDSGSCSSSGGDEAHSEEFTNKQLNFAGELRNINRQLDLKQELHERIIRNFSKLESED EDAKLRACNQKIDGLEAERRDLMDQLRNIKNKDTSAKIAEERRKRLQLLEQEISELRR KLVTQANMLKMREKEREKIQNLSGEIRAMKESKVKLIRAMRGESEKFRQWKMVREKEL TQLKSKDRKMQSEIVRQQTLHSKQRQVLKRKCEEALAANKRLKDALERQASAQAQRQK YAKDHGSSSNSHSKSDSWVDRELEIILSLIDAEHSLEQLMEDRAVINNHYHLLQQEKT NDPAEAKEQARLLANLEEELEMRNAQIADLQQKICPTDLDTRIRSLAEGVQSIGESRA VSKQLLKTLVQQRRQQAASLNEQRTALDEQRTQLLEAQQQGEAASRRLRSVETEHQEQ MLALQRAYEEKVAVLIRTANQRSAEIQPPAEQEKQRQQVLEEILSSREALQQELDALK ARTKSKIKAVKAEPQNLDESCQLVEVNETIELSDLSDDPDWLPETSKAKKLQANSSRN ATLAENVTTTGNASIQSLNSTAATEDGKRGKGCKCRTKCNTKRCGCFVANHGCCDGCV CKSNCLNPANAKEQAPQNGEGDGGGGQQPASTDGNGDSAEGEEVDDDEEHQATKENPV NFSTPQTPGKAKRPLMEPPPAAPSTPLGDLNGLEDLNGPKLARLARLHDALRTQCRCL LIIFRMSGLAFATPKRKFF" misc_feature 424..1413 /gene="Klp3A" /note="Kinesin motor domain, KIF4-like subfamily; Region: KISc_KIF4; cd01372" /db_xref="CDD:276823" misc_feature order(451..453,667..669,676..678,682..693,1120..1122) /gene="Klp3A" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:276823" misc_feature order(1267..1269,1276..1278,1285..1287) /gene="Klp3A" /note="microtubule interaction site [polypeptide binding]; other site" /db_xref="CDD:276823" misc_feature <1612..>3327 /gene="Klp3A" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" misc_feature 3574..3693 /gene="Klp3A" /note="DNA-binding cysteine-rich domain of male-specific lethal 2 and related proteins; Region: MSL2_CXC; cl25608" /db_xref="CDD:452415" polyA_site 4257 /gene="Klp3A" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cttcagttgt gttcgaggtt ggaacagaca aattacaacg ttttatttta attccattaa 61 attttaccta aaataagtag ccataaacta gccacaacga cacacccgct ggccaatcga 121 cctatcgaag ggcggacgga ccaatcgata actccgccat ttttgaaaat actggcagca 181 acaatgtatt cgtttgctgg cgtcgcattc ctttagctta aattgctggg ccccaaaaat 241 tgccgaaagt aacgtaaccg ctctagatag ctctagataa aaccaaaatt gcctgttgtc 301 cggggccacc gcggtgccta gttgctagtt cctagttctt ccctgtgttc cttggctgaa 361 aaaaaacggt tatccctatt tggcagatta atccccccct cgcagatgtc cggcgaggat 421 cccagttccg tggccgtggc cctgcgcgtg cgccccctgg tgcagtcgga gttggaccgc 481 ggctgccgga tcgccgtgga gcgttcggcg gacggagctc cccaggtgac ggtcaaccgg 541 acggaggcgt acacgtacaa caatgtcttc gacatcgggg acacccagaa ggacatcttc 601 gagagctgtg tgcagggcaa ggtgcagaag ctgctgcacg gctacaatgt caccatcctc 661 gcgtatggac aaacgggctc cggcaagacc tacaccatgg gcacggcctt caatggtgtg 721 ctggacgatc atgccggtgt cattccacgt gccgttcatg atatattcct ggccatcgag 781 gatatgcgcg aggaattccg ctttgcggtc acctgctcct tcgtggagct ctaccaggag 841 cagttctttg accttttctc cagccagaag cgcgagaagg ccaccgtgga cattagggag 901 gtgaagaacc gggttgtcat gccgggtctc accgaactgg aggttaaatc cgcccaggag 961 gtcaccgatc acctgatgcg cggctccgcc ggacgagctg tggccgccac ggccatgaac 1021 gagacctcct cgagatcgca tgccatcttc acgctcaccc tggtggccac caagctggac 1081 ggcaagcaat ccgtcaccac atcccgcttc aatctggtgg atctggctgg ctcggaacgc 1141 tgctccaaga ccctggccag cggggatcgc ttcaaggagg gcgtgaacat caacaagggc 1201 ctgctggccc tgggcaatgt gatcaatgcc ttgggatctg gccaggccgc cggctacata 1261 ccctaccggc agtccaagct gacgcgcctg ctgcaggact ccctgggcgg caactccatc 1321 accctgatga tcgcctgcgt cagcccggcc gactacaatg tggccgagac gctgagcact 1381 ctgcgctacg cggatcgcgc cctgcagatc aagaacaagc cggtggtcaa tctcgatccg 1441 catgcggcgg aggtcaacat gctgaaggac attatccaga agctgcgtgt ggaactcctg 1501 gcgggcggca agatgagcag ctccatcacc agcgccgttg gagctgctgg cttgggctct 1561 ctttccggcg aggagtcgct ggccgggtcc atggccaatg cggccgagaa tcagcggctc 1621 aaggagcaag tgcgcagcct gctggacagg aacaggaagc tgcagcagga gctgcatcac 1681 tccctggtcg atctcaccga gaaggagatg cgcgcgcaca ttgccgagca ggctcacgac 1741 aaactgcgcg tgcatgtggt gcagctgaag aagcaactga atctgaagga aggagacgct 1801 gaactgcgcg aaatctcaca gctggtggac ctggtggacg atgagctgca gcgcacgcag 1861 gaggagctgg agtcgcaggg ccaggagacc cgccagcagc tcagcagtcg ctcccaatcc 1921 gagagggacg gcgactcagg tagctgttcg tcgagcggcg gcgatgaagc ccactccgag 1981 gagtttacca acaagcagct gaacttcgcc ggcgagctgc gcaacatcaa tcgccagctg 2041 gacctcaagc aggagctgca cgagcgcatc attcgcaact tcagcaagct ggagtccgag 2101 gacgaggacg ccaagctgcg ggcgtgcaac cagaagatcg atggcctgga ggctgagcga 2161 cgcgacctca tggaccagct gcgcaacatt aaaaacaagg acacctcggc caagatagcc 2221 gaggagcgac gcaagcggct gcagctgctc gagcaggaga tctccgagct gcgccgcaag 2281 ctggtcaccc aggccaacat gctgaagatg cgcgagaagg agcgcgagaa gatccagaat 2341 ctgagcggcg agatccgggc catgaaggag tccaaggtga agctcatacg cgccatgcgc 2401 ggcgagtcgg agaagttccg ccagtggaag atggtgcgcg aaaaggagct cacccagctg 2461 aagagcaagg accgcaagat gcagtcggag attgtccgcc agcagacgtt gcactccaag 2521 caaaggcagg tgctgaagcg caagtgcgag gaggccttgg cggccaacaa gcggctgaag 2581 gatgccctcg agcggcaggc ctcggcgcag gcgcagcgcc agaagtacgc caaggatcat 2641 ggctcctcct ctaactcgca ctcgaagtcc gatagctggg tggaccgtga actggagatc 2701 atactctcgc tcatcgatgc ggagcacagt ttggagcagc tcatggagga ccgggcggtg 2761 atcaacaatc actatcacct gctgcagcag gagaagacca acgatccggc cgaggccaag 2821 gagcaggctc gcctgctggc caatctcgag gaggagctgg agatgcgcaa tgcccagatc 2881 gccgacctgc agcagaagat ctgccccacc gacctggaca ctcggattcg ctccctggcc 2941 gagggtgtcc agagcattgg cgaatcgcgc gctgttagca agcagctgct caagactctg 3001 gtgcagcagc gacgccagca ggcggccagc ctgaatgaac agcgcacggc gttggatgag 3061 cagcgcacgc agctcctgga ggcccagcag cagggcgagg cggccagcag gcgccttcgt 3121 tcggtggaga ccgagcatca ggagcaaatg ctcgccttgc aacgagccta cgaggagaag 3181 gtggccgttt tgatacggac agccaaccag agatcggctg agattcaacc gccggcggag 3241 caggagaagc agcgccagca ggtgctcgag gagatcctca gcagccgcga ggcactgcag 3301 caggagctgg acgcactgaa ggcccgcacg aagtcgaaga tcaaggctgt gaaggccgag 3361 ccacagaatc tcgatgaaag ttgccagctg gtggaggtca acgagaccat cgaactgagc 3421 gatctcagcg acgatcccga ctggttgccg gaaacatcga aggccaagaa acttcaggcg 3481 aactccagcc gcaatgcgac tttagccgag aatgtgacca ctaccggcaa tgcttccatc 3541 cagtccctga actccacagc cgccacggag gatggcaagc ggggcaaggg atgcaagtgc 3601 cggaccaaat gcaacaccaa gcgatgcggc tgctttgtgg ccaaccacgg ttgctgcgac 3661 ggctgcgttt gcaagagcaa ctgcctcaat cccgcgaacg ccaaggagca ggcgccgcaa 3721 aacggcgagg gtgacggtgg tggtggtcag caaccagcga gcacggatgg caatggggat 3781 tcggcggagg gcgaggaggt cgacgacgat gaggagcacc aggccaccaa ggagaatccc 3841 gtgaacttct ccacgccgca aacgcccggc aaggcgaagc gaccgctgat ggaaccaccg 3901 ccagcggcac catccacgcc gctgggcgac ctgaacggac tggaggacct caatggaccc 3961 aagttagcaa ggttagcaag attacatgat gccctaagaa cacaatgcag atgtctgctt 4021 ataattttca gaatgtcggg attggccttt gccacgccga agaggaaatt cttttgaagc 4081 ttcaaggaaa tcgggaaacg gaaacggaag tggaagtgga aaggaaagag aggagcagcg 4141 aagtcagctt gtttccaaga gccagattga acttctttca atatgtttat gttatcgttt 4201 atcatccaag actgtatgaa tcatccactt tttataatat agttccaata gctcatt