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LOCUS XM_044395233 4239 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_044395233 VERSION XM_044395233.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044395233.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4239 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4239 /gene="Klp3A" /note="kinesin-like protein 3A; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108055808" CDS 388..4059 /gene="Klp3A" /codon_start=1 /product="chromosome-associated kinesin KIF4 isoform X1" /protein_id="XP_044251168.1" /db_xref="GeneID:108055808" /translation="MSGEDPSSVAVALRVRPLVQSELDRGCRIAVERSADGAPQVTVN RTEAYTYNNVFDIGDTQKDIFESCVQGKVQKLLHGYNVTILAYGQTGSGKTYTMGTAF NGVLDDHAGVIPRAVHDIFLAIEDMREEFRFAVTCSFVELYQEQFFDLFSSQKREKAT VDIREVKNRVVMPGLTELEVKSAQEVTDHLMRGSAGRAVAATAMNETSSRSHAIFTLT LVATKLDGKQSVTTSRFNLVDLAGSERCSKTLASGDRFKEGVNINKGLLALGNVINAL GSGQAAGYIPYRQSKLTRLLQDSLGGNSITLMIACVSPADYNVAETLSTLRYADRALQ IKNKPVVNLDPHAAEVNMLKDIIQKLRVELLAGGKMSSSITSAVGAAGLGSLSGEESL AGSMANAAENQRLKEQVRSLLDRNRKLQQELHHSLVDLTEKEMRAHIAEQAHDKLRVH VVQLKKQLNLKEGDAELREISQLVDLVDDELQRTQEELESQGQETRQQLSSRSQSERD GDSGSCSSSGGDEAHSEEFTNKQLNFAGELRNINRQLDLKQELHERIIRNFSKLESED EDAKLRACNQKIDGLEAERRDLMDQLRNIKNKDTSAKIAEERRKRLQLLEQEISELRR KLVTQANMLKMREKEREKIQNLSGEIRAMKESKVKLIRAMRGESEKFRQWKMVREKEL TQLKSKDRKMQSEIVRQQTLHSKQRQVLKRKCEEALAANKRLKDALERQASAQAQRQK YAKDHGSSSNSHSKSDSWVDRELEIILSLIDAEHSLEQLMEDRAVINNHYHLLQQEKT NDPAEAKEQARLLANLEEELEMRNAQIADLQQKICPTDLDTRIRSLAEGVQSIGESRA VSKQLLKTLVQQRRQQAASLNEQRTALDEQRTQLLEAQQQGEAASRRLRSVETEHQEQ MLALQRAYEEKVAVLIRTANQRSAEIQPPAEQEKQRQQVLEEILSSREALQQELDALK ARTKSKIKAVKAEPQNLDESCQLVEVNETIELSDLSDDPDWLPETSKAKKLQANSSRN ATLAENVTTTGNASIQSLNSTAATEDGKRGKGCKCRTKCNTKRCGCFVANHGCCDGCV CKSNCLNPANAKEQAPQNGEGDGGGGQQPASTDGNGDSAEGEEVDDDEEHQATKENPV NFSTPQTPGKAKRPLMEPPPAAPSTPLGDLNGLEDLNGPKLARLARLHDALRTQCRCL LIIFRMSGLAFATPKRKFF" misc_feature 406..1395 /gene="Klp3A" /note="Kinesin motor domain, KIF4-like subfamily; Region: KISc_KIF4; cd01372" /db_xref="CDD:276823" misc_feature order(433..435,649..651,658..660,664..675,1102..1104) /gene="Klp3A" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:276823" misc_feature order(1249..1251,1258..1260,1267..1269) /gene="Klp3A" /note="microtubule interaction site [polypeptide binding]; other site" /db_xref="CDD:276823" misc_feature <1594..>3309 /gene="Klp3A" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" misc_feature 3556..3675 /gene="Klp3A" /note="DNA-binding cysteine-rich domain of male-specific lethal 2 and related proteins; Region: MSL2_CXC; cl25608" /db_xref="CDD:452415" polyA_site 4239 /gene="Klp3A" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cttcagttgt gttcgaggtt ggaacagaca aattacaacg ttttatttta attccattaa 61 attttaccta aaataagtag ccataaacta gccacaacga cacacccgct ggccaatcga 121 cctatcgaag ggcggacgga ccaatcgata actccgccat ttttgaaaat actggcagca 181 acaatgtatt cgtttgctgg cgtcgcattc ctttagctta aattgctggg ccccaaaaat 241 tgccgaaagt aacgtaaccg ctctagatag ctctagataa aaccaaaatt gcctgttgtc 301 cggggccacc gcggtgccta gttgctagtt cctagttctt ccctgtgttc cttggctgaa 361 aaaaaacgat taatcccccc ctcgcagatg tccggcgagg atcccagttc cgtggccgtg 421 gccctgcgcg tgcgccccct ggtgcagtcg gagttggacc gcggctgccg gatcgccgtg 481 gagcgttcgg cggacggagc tccccaggtg acggtcaacc ggacggaggc gtacacgtac 541 aacaatgtct tcgacatcgg ggacacccag aaggacatct tcgagagctg tgtgcagggc 601 aaggtgcaga agctgctgca cggctacaat gtcaccatcc tcgcgtatgg acaaacgggc 661 tccggcaaga cctacaccat gggcacggcc ttcaatggtg tgctggacga tcatgccggt 721 gtcattccac gtgccgttca tgatatattc ctggccatcg aggatatgcg cgaggaattc 781 cgctttgcgg tcacctgctc cttcgtggag ctctaccagg agcagttctt tgaccttttc 841 tccagccaga agcgcgagaa ggccaccgtg gacattaggg aggtgaagaa ccgggttgtc 901 atgccgggtc tcaccgaact ggaggttaaa tccgcccagg aggtcaccga tcacctgatg 961 cgcggctccg ccggacgagc tgtggccgcc acggccatga acgagacctc ctcgagatcg 1021 catgccatct tcacgctcac cctggtggcc accaagctgg acggcaagca atccgtcacc 1081 acatcccgct tcaatctggt ggatctggct ggctcggaac gctgctccaa gaccctggcc 1141 agcggggatc gcttcaagga gggcgtgaac atcaacaagg gcctgctggc cctgggcaat 1201 gtgatcaatg ccttgggatc tggccaggcc gccggctaca taccctaccg gcagtccaag 1261 ctgacgcgcc tgctgcagga ctccctgggc ggcaactcca tcaccctgat gatcgcctgc 1321 gtcagcccgg ccgactacaa tgtggccgag acgctgagca ctctgcgcta cgcggatcgc 1381 gccctgcaga tcaagaacaa gccggtggtc aatctcgatc cgcatgcggc ggaggtcaac 1441 atgctgaagg acattatcca gaagctgcgt gtggaactcc tggcgggcgg caagatgagc 1501 agctccatca ccagcgccgt tggagctgct ggcttgggct ctctttccgg cgaggagtcg 1561 ctggccgggt ccatggccaa tgcggccgag aatcagcggc tcaaggagca agtgcgcagc 1621 ctgctggaca ggaacaggaa gctgcagcag gagctgcatc actccctggt cgatctcacc 1681 gagaaggaga tgcgcgcgca cattgccgag caggctcacg acaaactgcg cgtgcatgtg 1741 gtgcagctga agaagcaact gaatctgaag gaaggagacg ctgaactgcg cgaaatctca 1801 cagctggtgg acctggtgga cgatgagctg cagcgcacgc aggaggagct ggagtcgcag 1861 ggccaggaga cccgccagca gctcagcagt cgctcccaat ccgagaggga cggcgactca 1921 ggtagctgtt cgtcgagcgg cggcgatgaa gcccactccg aggagtttac caacaagcag 1981 ctgaacttcg ccggcgagct gcgcaacatc aatcgccagc tggacctcaa gcaggagctg 2041 cacgagcgca tcattcgcaa cttcagcaag ctggagtccg aggacgagga cgccaagctg 2101 cgggcgtgca accagaagat cgatggcctg gaggctgagc gacgcgacct catggaccag 2161 ctgcgcaaca ttaaaaacaa ggacacctcg gccaagatag ccgaggagcg acgcaagcgg 2221 ctgcagctgc tcgagcagga gatctccgag ctgcgccgca agctggtcac ccaggccaac 2281 atgctgaaga tgcgcgagaa ggagcgcgag aagatccaga atctgagcgg cgagatccgg 2341 gccatgaagg agtccaaggt gaagctcata cgcgccatgc gcggcgagtc ggagaagttc 2401 cgccagtgga agatggtgcg cgaaaaggag ctcacccagc tgaagagcaa ggaccgcaag 2461 atgcagtcgg agattgtccg ccagcagacg ttgcactcca agcaaaggca ggtgctgaag 2521 cgcaagtgcg aggaggcctt ggcggccaac aagcggctga aggatgccct cgagcggcag 2581 gcctcggcgc aggcgcagcg ccagaagtac gccaaggatc atggctcctc ctctaactcg 2641 cactcgaagt ccgatagctg ggtggaccgt gaactggaga tcatactctc gctcatcgat 2701 gcggagcaca gtttggagca gctcatggag gaccgggcgg tgatcaacaa tcactatcac 2761 ctgctgcagc aggagaagac caacgatccg gccgaggcca aggagcaggc tcgcctgctg 2821 gccaatctcg aggaggagct ggagatgcgc aatgcccaga tcgccgacct gcagcagaag 2881 atctgcccca ccgacctgga cactcggatt cgctccctgg ccgagggtgt ccagagcatt 2941 ggcgaatcgc gcgctgttag caagcagctg ctcaagactc tggtgcagca gcgacgccag 3001 caggcggcca gcctgaatga acagcgcacg gcgttggatg agcagcgcac gcagctcctg 3061 gaggcccagc agcagggcga ggcggccagc aggcgccttc gttcggtgga gaccgagcat 3121 caggagcaaa tgctcgcctt gcaacgagcc tacgaggaga aggtggccgt tttgatacgg 3181 acagccaacc agagatcggc tgagattcaa ccgccggcgg agcaggagaa gcagcgccag 3241 caggtgctcg aggagatcct cagcagccgc gaggcactgc agcaggagct ggacgcactg 3301 aaggcccgca cgaagtcgaa gatcaaggct gtgaaggccg agccacagaa tctcgatgaa 3361 agttgccagc tggtggaggt caacgagacc atcgaactga gcgatctcag cgacgatccc 3421 gactggttgc cggaaacatc gaaggccaag aaacttcagg cgaactccag ccgcaatgcg 3481 actttagccg agaatgtgac cactaccggc aatgcttcca tccagtccct gaactccaca 3541 gccgccacgg aggatggcaa gcggggcaag ggatgcaagt gccggaccaa atgcaacacc 3601 aagcgatgcg gctgctttgt ggccaaccac ggttgctgcg acggctgcgt ttgcaagagc 3661 aactgcctca atcccgcgaa cgccaaggag caggcgccgc aaaacggcga gggtgacggt 3721 ggtggtggtc agcaaccagc gagcacggat ggcaatgggg attcggcgga gggcgaggag 3781 gtcgacgacg atgaggagca ccaggccacc aaggagaatc ccgtgaactt ctccacgccg 3841 caaacgcccg gcaaggcgaa gcgaccgctg atggaaccac cgccagcggc accatccacg 3901 ccgctgggcg acctgaacgg actggaggac ctcaatggac ccaagttagc aaggttagca 3961 agattacatg atgccctaag aacacaatgc agatgtctgc ttataatttt cagaatgtcg 4021 ggattggcct ttgccacgcc gaagaggaaa ttcttttgaa gcttcaagga aatcgggaaa 4081 cggaaacgga agtggaagtg gaaaggaaag agaggagcag cgaagtcagc ttgtttccaa 4141 gagccagatt gaacttcttt caatatgttt atgttatcgt ttatcatcca agactgtatg 4201 aatcatccac tttttataat atagttccaa tagctcatt