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LOCUS XM_044395104 7068 bp mRNA linear INV 09-DEC-2024 (LOC108056049), transcript variant X1, mRNA. ACCESSION XM_044395104 VERSION XM_044395104.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044395104.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7068 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7068 /gene="LOC108056049" /note="uncharacterized LOC108056049; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108056049" CDS 750..6296 /gene="LOC108056049" /codon_start=1 /product="uncharacterized protein isoform X1" /protein_id="XP_044251039.1" /db_xref="GeneID:108056049" /translation="MPRFRNEEPEQSHYSDGDVVWVKIHNTEIWWPGEVTLSQDFRFV NSSRPPFAVVAFFNEKTFEQVKSPKLIYPFQCDHKEEFIKRGTKKADGMHMGDKFSDD VAIAESRYRRHQVLGLHADRSSVIGDGGTGSGSGSGNGGAGGSAPRPDSLIKAFLSSS SSISGGSSMGHNNSGRSSSGVPSPAGIRQQQAPTFRIMDIGGGGGSSASDPPRDRTFD EASYECNMCTFRTNSMSVLLIHRRAHLESSSSFSSSNSNSTSTTASTSHQSSMLLNVG TRKTRAARARAHTTTSSQQPFHRSSVRCHSRHVSIVVDAPLTNEEQKMVKSIAKQTLA SIEMVVRPGEDSSSAASNRNSSSSSSVTPPANPRDPRGQQRSSNQLRATMPAPQSPPA KQRRLTRSMSRRQRGGGEAISPPAATPELLLPPPPAMQTPRRGANRRCTLAATEQLPS ITRRGNPLRKTLTTAPVESKEKLEKLEKEKPPRSAGRRKRTFSRSRTAMTERDRPLII HSSPPPTKREMETAKEKAKVVEMEMEAEPELPSTASLEADLQEKQQKEKENLPQSSID ASKQLQLSLMAEWGDDETDESLEEPPVNKETVLEAPPPAEQKAEENEELEEEELEEQL EKTDDLEGMKKKRSIRNIPKKDRRDVVVQEFQPELPEDEPQMDVEEEQEEPIVIPDSD ASSNGSVVFVEDEPRQRGGRAGIHAHPNGNGNDKAATSSSSVKAVVPSCFDFEEEEEE LLLQPEQPDGHGNGLSYRRRTNTNRCLIDVNGKSHAEEEEEERPAEVETAGGAAQELD GGLFKGFEDLQEPIAAVETEKVPEPEPKSPEKQEELPVEPEEAAPSEEPATEGDHLSL PIKERQKRIFKSRNKSIAVATQEEEEEEEVTPPLQEEQEEQEEKQEQQEEVDTSLLFN GAKSRSSSGDAMESLGSRSRNKRRNKSKTESNRRPAKLTNLQNLQKELLHEELSNNSS SSSGSSSNQASSSSSSSDSHCRLSPEPSSSNSCSIASNIAVISAEEARELQRSASGAG LIHAAIVDATQPVQRGGVLILEDIRLPNLYEPFGSLQSSSTDSNGSRQTNSQQPEDND EQSQDTTTEEQLEKNEEQEQVVEEIEEVEEVEEAEEDEEEEQMPDDEPAEQPEQHLNQ DQEEEQKEPPDNWSPERQSPAEEEVRLLPQAREVLLKKREQELLRQYEADLVSGRSAE KCRQARARWSRTMPRSPEEEEEEAAAAEELELMEVEEEEGPVKEDEELPEEEELQLQP MEEEEPLEDTETSLDEQLAAVELVLPATLFSSSSSRRPASHPPVTPVQSLPPSTQPAR HLSCARTLSDADVAKAHQQLVDLREQQRLRSTSTSPTAAAVLTPPETLLQQTSGQRRT RRRSRNAGSSSGGDHVMTMESGTRSDVAEESSCETKDGQESPENPPQLCAGRICAVMT RPIPGYSHTFMLCSLNNNNFTPLNNVALYLDNEKNHLVPVPREALLEPPRLADGHPLS AVFADIDFLGGEAVAQVVEPSEAEDLGQSQDLSPRHLSPQMLLSEAAAAAGGEQDVDA MGIMTPLSQVGGNITGAAGGSSSYVNEEEELSLHEEQLQANVLQLNVNGHRLDLDPSM LFSIAEQPDSCIEVSVTETTGGSGGSGGSQLTGGMRAVLQARDILQAAEVYLQERDLQ LVTLGDEDEATDGGLPVTAGTDLLSQALASADDDDEDDDTAVDFVNAANAGVGLLHID TRTGGASLLHVGGSEVFISHPMAHPQNVHLTPPITARTNETNALLDQTPIMSTLENPS SSMQLRRVSPLVEGNLEDSLAVIGVTNGSGVPTSLELPITVTNPAIASRMAAPVADML QFAPFQ" misc_feature 798..1070 /gene="LOC108056049" /note="PWWP (Pro-Trp-Trp-Pro) domain; Region: PWWP; cd05162" /db_xref="CDD:438958" misc_feature order(828..830,840..842,915..917) /gene="LOC108056049" /note="putative methyl-histone binding site [polypeptide binding]; other site" /db_xref="CDD:438958" misc_feature 834..845 /gene="LOC108056049" /note="PWWP sequence motif; other site" /db_xref="CDD:438958" polyA_site 7068 /gene="LOC108056049" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtttctccac ctctaacggg aacttctaat tcgctgcggg tatttttttt gtgtttgttg 61 ttacatataa tccgatcaat ttcgatcgtt cgtttcgcaa atcagtgtcc gctgctcccg 121 accgtcgaca ttttggccaa tttcgggcgg gcgtcatcga aacgttcagt ttgcctcgct 181 ctcgctccgt ttcggttttt ccgtgcctct tttttttggt ccgttttcgt ttcgttttcg 241 ttttccactt ggaatcgcga ggggatgacg gcaggggagg tggaggtgca tccccaatcc 301 aatgcaattg tagctgagcg cgctcataaa aatcaaaagt atatttagat atacatgtat 361 atataataat cggatacgtt ttctcatcgc cctcgcgcgc gtgtgtgtgt gtgtgtattt 421 aaatcagtaa tattgtgtgc gtgtgccgag cgcgcagcgt tttgttgttg agtgcgagcg 481 agacggcggc cggggaaaca gagagagaaa caggaactgc aacaaaaaca ttcagctgca 541 acaacaacaa gaaccacatt cagcagcagc tgcagcagcg atgacttcca gtcgctgcac 601 tggcatagcg ctgcctggaa gcgtattggg atgccgatgc ctcctcgtcc tcgtctgcta 661 ggattacgtt tattaccgcg caacaacgaa ccatcccaga gacagcaagg atccaggaga 721 aagaccagga ctcctctaga accggcacaa tgccacgctt tcgcaacgag gagccggagc 781 agtcgcacta cagcgatggc gacgtcgtct gggtgaagat ccacaacacg gagatctggt 841 ggcccggcga agtgaccctt tcgcaggact ttcgcttcgt caactccagc cgaccgccat 901 tcgcagttgt ggcgtttttc aatgaaaaaa ccttcgagca agtgaaatca ccgaaattga 961 tatacccctt tcaatgcgat cacaaggagg agttcattaa acgaggcacc aaaaaggccg 1021 atgggatgca catgggcgac aagttcagtg acgatgtggc gatcgcggag tcgcggtatc 1081 gccgtcacca ggtcctcggc ctgcatgccg atcgatcgtc ggtgatcggt gacgggggaa 1141 ccggaagcgg cagcggaagc ggaaacggag gagcaggcgg aagtgccccc cgaccggaca 1201 gcctcatcaa ggccttcctc tcgagcagca gcagcatcag cggaggcagc agcatgggac 1261 acaacaacag tggccgcagc agcagcggag tgccttcacc agcggggatt cgacaacagc 1321 aggcgcccac tttccgcatc atggacatcg gaggaggcgg cggctcctcc gccagcgatc 1381 cacctcgcga tcgcaccttc gacgaggcca gctacgagtg caacatgtgc acctttcgca 1441 ccaacagcat gagcgtcctg ctcatccatc ggcgtgccca cttggagtcg agcagcagct 1501 tcagcagcag caacagcaat agcaccagta ccaccgccag caccagtcac caatcctcga 1561 tgctcttgaa tgtgggaacc cgcaagacgc gtgcggcacg cgccagggct cacaccacca 1621 ccagcagcca gcagcccttc catcgcagct cggtgcgctg ccattcgcgg cacgtctcca 1681 ttgtggtgga tgcaccgctg accaacgagg agcagaagat ggtgaagagc attgccaagc 1741 agacgctggc cagcatcgaa atggtggtcc gtcccggcga ggatagctcc tccgccgcct 1801 cgaatcgtaa tagtagcagc tcatcgtcgg taacgccgcc cgcgaatccc cgggatccgc 1861 gtggccagca gcgcagctcc aatcaactgc gtgccaccat gcccgcccca caatcgccgc 1921 cggcgaagca gcgtcgactt acccgctcca tgagcaggcg gcagcgggga ggaggagaag 1981 ctatctcccc accagccgcc actccagagc tcctactgcc tcctccgcca gcgatgcaga 2041 cgccacgcag aggagctaac agaagatgca ctttggctgc cacagagcag ctgccttcga 2101 tcaccaggcg gggtaatcct ctccgcaaaa cgctgaccac ggcgccagtg gagagcaagg 2161 agaagttgga aaagctggag aaggagaagc cacctcgaag cgctggtcgg cgcaagagaa 2221 ccttctccag gagtagaaca gcgatgactg agcgagatcg tccgctaatc atccattcat 2281 cgccgccgcc aacgaaaagg gaaatggaaa cggctaagga aaaggctaag gtagtggaaa 2341 tggaaatgga agcggagcct gaactgccct ccactgcctc gctagaggct gatcttcaag 2401 agaagcagca gaaagagaaa gagaatctcc cgcagagcag catcgatgcc tccaagcagc 2461 tgcagttaag tttgatggcc gaatggggcg acgatgagac ggatgagtcg ctggaggagc 2521 caccggttaa taaggagacg gtattggaag ctcctcctcc agcagagcag aaagcagagg 2581 agaatgagga gctagaggag gaggaactgg aggagcagct agagaagact gatgacttgg 2641 agggcatgaa aaagaagcgc agcattcgca atataccaaa gaaggatcgc cgcgatgtgg 2701 ttgtgcagga gtttcagcca gagctgccgg aggatgagcc ccaaatggat gtggaggaag 2761 agcaagagga gccgattgtc atccccgaca gcgatgccag ctccaatggt agcgtcgtgt 2821 tcgtggagga cgagccaagg cagcgaggag gcagggcagg aatacatgcg catcccaatg 2881 gcaatggcaa cgacaaggcg gccacatcct catcctcagt taaggcggtc gtgccctctt 2941 gctttgattt cgaggaggag gaagaggaac tgctgctgca gccggagcag ccggatggtc 3001 atgggaatgg cttgagctac aggcgtcgca ccaatacaaa tcgatgcctc atcgatgtga 3061 atggaaaatc gcatgcggag gaggaggagg aggagcgacc agcggaggtg gagactgctg 3121 gaggagctgc ccaggaactg gacggtggcc tcttcaaggg ctttgaagat ttacaggaac 3181 caatcgcagc cgttgagacg gagaaagtgc ctgaaccgga gcccaaatcc cctgagaagc 3241 aggaagagct gccggtggag cccgaggagg ctgctccaag cgaggaaccg gccaccgagg 3301 gcgatcactt gagcctgccc atcaaggagc gtcagaagcg catctttaag tcgcgcaaca 3361 agtcgattgc ggttgcaact caggaggagg aggaggagga ggaggttaca ccgccactgc 3421 aggaggagca ggaagagcag gaagagaagc aggagcagca ggaggaggta gatacctcgc 3481 ttctcttcaa cggcgccaag agccgcagca gcagtggtga tgccatggag agcctgggca 3541 gccggagcag aaataagcgg cgcaacaaat ccaagactga atcaaaccgt cgaccggcga 3601 agcttacgaa cctccagaac ctccagaagg agctcctcca cgaggagctg agcaacaaca 3661 gcagcagcag cagcggcagt agcagcaacc aagccagctc cagctcctcc agctcggact 3721 cccactgcag gctttccccg gagccgagct ccagcaacag ctgttcgata gcctcgaaca 3781 ttgcggtcat ttcggcggag gaggcacgcg aactgcagcg ctcggcctcg ggcgctggat 3841 tgatacatgc ggccattgtg gatgccacac agccggtgca gcgaggcggt gtgctcatcc 3901 tggaggacat acgactgccc aatttgtacg agccctttgg cagcctgcag tcgtcctcca 3961 cggacagcaa tggcagcagg cagacgaact cacagcagcc ggaggataat gatgaacagt 4021 cgcaggacac gacgaccgag gagcagctgg agaagaatga agagcaggag caggtggttg 4081 aagagattga ggaagttgag gaggttgagg aggctgaaga agatgaggag gaggagcaaa 4141 tgcctgatga tgaaccagcc gagcagccag agcagcatct aaatcaagat caggaggagg 4201 aacagaagga gccaccggat aactggtcac cggagcgcca atcgcccgcc gaggaggagg 4261 tgcgcctcct gccgcaggct cgcgaggtgc tgctcaagaa gcgcgagcag gagctgctgc 4321 gtcagtacga ggctgacttg gtcagcggtc ggagtgcgga gaagtgtcgc caggcacgcg 4381 cccgctggag ccgaacgatg ccgcgatccc ccgaagagga ggaggaagag gcggcggctg 4441 cggaggagct ggagctaatg gaggtggagg aggaggaggg tcctgtcaag gaggatgagg 4501 agctgccaga ggaggaggag ctgcagctgc agccaatgga ggaggaggaa ccgctagagg 4561 acaccgagac ctccctggac gagcagctgg ccgccgtgga gctggttctg ccggccaccc 4621 tgttctcctc gtcctcgtcc cgtcgccccg ccagccaccc gccagtcact cctgtccagt 4681 cgcttccccc ctcgacgcag cccgcccggc atctcagctg cgcccgcact ttgagcgatg 4741 cggacgtggc caaggcccac cagcagctgg tggatctgcg ggagcagcag cgcctccgtt 4801 ccacctccac atcgccgacg gcggcggctg tgctgacgcc gccggaaacc ctgctgcagc 4861 agaccagcgg gcaacggagg acgcgtcgcc gctcgaggaa tgcgggcagc agcagtggtg 4921 gtgaccatgt gatgaccatg gagagtggaa cccgcagcga cgtggccgag gagtcgtcgt 4981 gcgagaccaa ggatggtcag gagagccccg agaacccgcc tcagctgtgc gctggacgca 5041 tctgcgcggt gatgactcgc ccgatccccg gctacagcca caccttcatg ctctgctcgc 5101 tgaacaacaa caacttcacg ccgctgaaca acgtggcttt gtacctggac aacgagaaga 5161 accacttggt gccggtgccg cgagaggcgc tcctggagcc tccccgcctg gccgatggcc 5221 atccgctgtc cgccgtcttt gcggacattg attttctggg cggcgaggcg gtggcccagg 5281 tggtggagcc ctcggaggcg gaggatcttg gccagagcca ggatctctcg ccgcgccatc 5341 tatccccgca aatgctgctc agcgaggcag cggcggcggc gggcggcgag caggatgtcg 5401 acgccatggg cattatgacg cccctcagcc aggtgggagg caacataacg ggagccgccg 5461 gcggtagcag cagctatgtc aacgaggagg aggagctgtc gctgcacgaa gagcagctgc 5521 aggccaatgt gctgcagctg aatgtgaacg gccatcggct ggatttggat ccctcgatgc 5581 tgttcagcat tgccgagcag ccggactcgt gcatcgaggt gagcgtcacc gagacgacgg 5641 gtggatcagg tggctccggt ggctcccagt tgactggagg aatgagagcc gtgctgcagg 5701 ctcgcgacat tctgcaggcg gcggaggttt acctgcagga gcgcgatctc cagctggtca 5761 cgctgggcga tgaagatgaa gccaccgatg gcgggctgcc tgtaaccgcc ggcacggatc 5821 tgctctcgca ggctttggcc agcgctgacg acgacgacga ggatgatgac acggcggtgg 5881 actttgtgaa cgcagccaac gctggcgttg gcctgctcca catagacacc cggaccggcg 5941 gcgccagttt gctgcatgtg ggtggcagcg aggtgttcat ctcccatccg atggctcatc 6001 cgcagaatgt ccatttgacg ccgccgataa cggcccgcac caatgagaca aacgccctgc 6061 tcgaccagac gcccatcatg tccacgctgg agaatcccag cagcagcatg cagctgcgtc 6121 gcgtttcgcc gctggtggag ggcaatttgg aggacagcct ggccgtgatt ggggtgacga 6181 atggcagcgg agtgcccacc tcgctggagc tgcccattac ggtgaccaat ccggcgattg 6241 cctcgcggat ggcggccccc gttgccgaca tgctgcagtt tgctccgttt cagtaggatg 6301 agtaggagca gcacacagtc caagagcaga tgaacttgct ttatttttcc taagattaag 6361 aaaccttttg ttagaataag tagaaatgca gctaatgcat tttatgttga gttagttaaa 6421 ttgacaagat aacaagagga tatttagtgg cctagattcc tcgacttgac cttatccaca 6481 ttgcaaatgt aggatagaaa aggaatccca tttgcacgta aaagatttaa taactattgg 6541 ttagaagcga ataagtagag caagtgcaat ggaagctgtt cggcaccaaa ggaaaaacct 6601 acgaagagtt cacaggaagc acatttatat ttatatttaa cgaccataaa tgactatacc 6661 aatgtgtgta agatatgtca gtctctaagc taacagataa aagataacag atgatgtaaa 6721 gtgagagagt gtcctcgccc agaagaataa aaaaaggcaa atgtgcaaca aagatatatt 6781 ttttttattg ccacggatcg tatttaagca accttcttct agtaagcgtc aagacaaagc 6841 ctaattttaa ttgacaccag tgacttattt tggttggttc ggttctgaca agttgaatta 6901 attaaatacg ctgtatttaa cttttttttt ttttcgtttc tccaaaaagc aaaacgtttt 6961 gtgtcaaaat tatatgcatt ttcaacgaac gagaatctac gcatgtacag tttatttttt 7021 gaaaatacaa ccaaatataa ataaataaat aaatgtatgg aaaaataa