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LOCUS XM_044394544 2519 bp mRNA linear INV 09-DEC-2024 (LOC108056420), transcript variant X2, mRNA. ACCESSION XM_044394544 VERSION XM_044394544.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044394544.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2519 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2519 /gene="LOC108056420" /note="apoptosis-inducing factor 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108056420" CDS 395..2203 /gene="LOC108056420" /codon_start=1 /product="apoptosis-inducing factor 3 isoform X2" /protein_id="XP_044250479.1" /db_xref="GeneID:108056420" /translation="MGSINCKEYKTTGSTPKKEKSTGNTGGAVGSYQSKCSNQSNQSN QSPSTTMSTEASSPDAEYTGAVNVELNVADLKENEMRQVDFDEDTRVLVVKQNDRLLA VGAKCTHYGAPLQTGALGLGRVRCPWHGACFNLENGDIEDFPGLDSLPCYRVEVGNQG QVLLRAKRSDLANNKRLKNMVKRKPDDQRVFIVVGGGPSGAVAVETLRQEGFTGRLIF VCREEYLPYDRVKISKAMSLEIEQLRFRDEDFYREYDIELWQGVAAERLDTAQKELHC SNGYVVKYDKIYLATGCSAFRPPIPGVNLQNVRTVRELADTKAILASISAESRVVCLG SSFIALEAAAGLVAKVQSVTVVGRENVPLKAAFGAEIGQRVLQLFEDNKVVMRMQSGI SEILGDDEGRVREVVLLDGSRLPCDLLILGTGSKLNTQFLAKSGVKVNRNGSVDVTDF LESNVPDVYVGGDIANAHIHGLAHDRVNIGHYQLAQYHGRVAAINMCGGVKKLEAVPF FFTLIFGKGIRYAGHGSYKEVIVDGSLEEFKFVAYFVNEADTVTAVASCGRDPVVAQF AELISQGKCLGRGQIEDPATRQDWTRKLGEPLPQVR" misc_feature 605..883 /gene="LOC108056420" /note="AIFL (apoptosis-inducing factor like) family, N-terminal Rieske domain; members of this family show similarity to human AIFL, containing an N-terminal Rieske domain and a C-terminal pyridine nucleotide-disulfide oxidoreductase domain (Pyr_redox). The...; Region: Rieske_AIFL_N; cd03478" /db_xref="CDD:239560" misc_feature order(713..715,719..724,770..772,779..781,785..787) /gene="LOC108056420" /note="[2Fe-2S] cluster binding site [ion binding]; other site" /db_xref="CDD:239560" misc_feature 965..2155 /gene="LOC108056420" /note="NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; Region: NirB; COG1251" /db_xref="CDD:440863" polyA_site 2519 /gene="LOC108056420" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgaagttgag cgccatacgc ggttcgcagt tcacgcgcgc cagacgtgcc tcgctcctgc 61 tctctctcct gccttgctct ctccccgcgc agcgttcctg gtccattcca atcccatctc 121 cattccagtt ccgtcaatct cgtctcctcg gaacagacct gttgcacgct ctcgcgtcct 181 ctccttccac gcgattccag ttgttttgtt tttgttatag ttattgttat tgcaactccg 241 gcgagagtgg tggcaaccct atcgagcagc tcttaacttg gccaaaacgc gcggaggcgt 301 cgaaaacctt ctgaggatat ttgagcgtaa accaagaacc catctgagaa tactcaacgc 361 acagccgttt ttgaacaacc gccgcctact cacaatgggt tccatcaact gcaaggaata 421 caaaactacg gggagtaccc ccaaaaagga aaagtcgacg ggtaacacag gtggtgccgt 481 gggttcgtac cagtccaagt gcagcaacca aagcaaccag agcaaccaga gtcccagcac 541 aaccatgtcg acggaggcct cctcgccgga cgcggagtac acgggtgcgg tgaacgtgga 601 gctgaatgtg gcggacctca aggagaacga gatgaggcag gtggacttcg atgaggacac 661 ccgcgtgctg gtggtgaagc agaacgaccg cctgctggcg gtgggcgcca agtgcaccca 721 ctacggggct ccgctgcaga cgggcgcctt gggtttgggt cgcgtccgct gtccctggca 781 cggcgcctgc ttcaacctgg agaacggcga catcgaggac tttcccgggc tcgactccct 841 gccctgctac cgcgtggagg tgggcaacca ggggcaggtg ctgctccggg ccaagcgctc 901 cgatctggcc aacaacaagc ggctgaagaa catggtcaag cggaagcccg acgaccagcg 961 ggtcttcatt gtcgtgggcg gcggtccctc gggcgccgtg gccgtggaga cgctgcgcca 1021 ggagggcttc accggccgcc tgatcttcgt gtgccgcgag gagtacctgc cctacgaccg 1081 cgtcaagatc tccaaggcca tgagcctgga gatcgagcag ctgcgcttcc gcgacgagga 1141 cttctaccgc gagtacgaca tcgagctgtg gcagggcgtg gccgccgagc ggctggacac 1201 cgcgcagaag gagctgcact gcagcaacgg ctatgtggtg aagtacgaca agatctacct 1261 ggccaccggc tgctcggcct tccggccgcc cattccgggc gtcaatctgc agaacgttcg 1321 cacggtccgc gagctggccg acaccaaggc catcctggcc tccatctccg ccgagtcgcg 1381 cgtcgtctgt ctgggctcca gcttcatcgc cctggaggcc gccgccggcc tggtcgccaa 1441 ggtgcagagc gtcaccgtcg tgggccgcga gaacgtgccg ctgaaggccg ccttcggggc 1501 ggagatcggc cagcgggtgc tgcagctgtt cgaggacaac aaggtggtca tgcgcatgca 1561 gagcggcatc tcggagatcc tgggcgacga cgagggcaga gtgagggaag tggtgctgct 1621 ggacggctcg cggctgccct gcgacctgct catcctgggc acgggctcca agctgaacac 1681 ccagttcctg gccaagtcgg gcgtgaaggt gaatcggaat gggtccgtgg acgtcaccga 1741 cttcctggag tccaatgtgc cggatgtgta tgtgggcggc gacatagcca acgcccacat 1801 ccatgggttg gcccacgacc gcgtgaacat cgggcactac cagctggccc agtaccacgg 1861 acgcgtggcg gccatcaaca tgtgcggcgg cgtcaagaag ctggaggccg tgcccttctt 1921 cttcaccctg atcttcggca agggcatccg ctacgcgggc cacggctcct acaaggaggt 1981 catcgtcgac ggcagcctgg aggagttcaa gttcgtggcc tacttcgtca acgaggcgga 2041 cacggtgacg gcggtggcct cgtgcggccg cgatcccgtc gtggcccagt tcgccgagct 2101 catctcgcag ggcaagtgcc tcggaagggg ccagatcgag gaccccgcca cgcggcagga 2161 ctggaccagg aagctgggcg agccgctgcc ccaagttcgc taggaaaaat gaagaaacac 2221 ctgtgtatta tcgctgagat tcgttgttag atgtatgcat attcatgcta tcgttgggta 2281 ttcattatat actccttatg caaggcacct gcaaggtgtc caaccccatc tgtgtatatt 2341 tataatcgta gttggctagt gactccctgg agttcctgcc gcggcggccg cttttgggcc 2401 cccgagaaga tcaaagattt aagcttttta tccccttgcc acacaatgta tttcttgagt 2461 catattcgtt tatttttgct aaataaagtg ttttaacgat gtcgtaattc cagttaaaa