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LOCUS XM_044394512 3507 bp mRNA linear INV 09-DEC-2024 X3, mRNA. ACCESSION XM_044394512 VERSION XM_044394512.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044394512.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3507 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3507 /gene="rsh" /note="radish; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108068229" CDS 617..3394 /gene="rsh" /codon_start=1 /product="uncharacterized protein rsh isoform X3" /protein_id="XP_044250447.1" /db_xref="GeneID:108068229" /translation="MECSDFMQQLRSFKPQSLGCAVARRKSSTTLIFPLPPQACSDEF CEEYPHNLMPTPGYWIECSRQKITMPTPHTIWDESDSEHEDIRAGSASDAYLERECSD LYEDDEDSEATPSPRKKTTIEEQWDQQGAFELISVEQETYEKYFYGTEHWNYFTSDED LGPVILSIKQETLNGRDQFRILVRAGSYTVHGLIPASCVFADRYNREEVVRSLGKEVN LNPPLTLGQLPDTPEELLKLDQVFIKSELKVGVIFVKEDQYTEEQILDNNENSPLFDE FLTLLGDRVRLRGFDKYKGGLDTVHDLTGLFSVYTNWRNIEIMFHVSTLLPYEKHDPQ KLQRKRHIGNDIVCVVFLEADNTRFSPACIKSHFLHTFILVRVSARIKHKPTRYEVSV VTRDEVGAYKPYLWEQSVFEKGPMFREWLLTKIVNGERASYSAPKFARMQERTRSQML EDLVMNLSNHAETGQIPKPYRRGSWRPIGHMRPSSPLLDSVRDQFEDYDQLAKDFTRV FLNEEPSCLTNAHLFDVVFLVGQSKQKARFIGVRAILGVRSRVFQEMLYGIQTGFGSP QIPVAEIFARPAPSLVSPQNQKPKSNNYLTVPDSDSIRPKSVPSSPMVKRAFSRLGTI TAGWGRSIRNKNTNQLNPDDKKKWISSTDCSNRDSKDKDKDKPGNNQLAVPRLSVCAD AQKVDRAKLAQTEFNIIEFDPDTFRVLLDYLHTGTCPLTCVSIPGLLCAAEHYDLPEL LQACFHHCKQFLRIEVVCPMLISLENYYWRYTSASELVNMILSFVESKAHSLFKCPEF LHLSESMVQMIMCRELQTPEIRKFEAMLAWAQHKVGKLKNHPNKDTQFEFECIMERLT RDLNLCRISPSELLTVVLPSKSMKNERIMETLMVQVNLGTYRMPELDAYRQQLRQQES AEATVQVHRGG" misc_feature 1409..1954 /gene="rsh" /note="Rap/ran-GAP; Region: Rap_GAP; pfam02145" /db_xref="CDD:460463" misc_feature 2159..>2326 /gene="rsh" /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily; Region: BTB_POZ; cl38908" /db_xref="CDD:453885" misc_feature <2693..2872 /gene="rsh" /note="Broad-Complex, Tramtrack and Bric a brac; Region: BTB; smart00225" /db_xref="CDD:197585" misc_feature 2885..3103 /gene="rsh" /note="BACK (BTB and C-terminal Kelch) domain; Region: BACK; cl28903" /db_xref="CDD:475122" ORIGIN 1 atagtagagg agccagggac ccagaagcgc ggaaaactat gcaacgattt ttggccaact 61 atcgctgaag tcctgaagtc ctcgccattg cgcctgcgag tgtgtgcgtg tgcgtgtgcc 121 tctgtgtatg tgtgcgtgta cttttcacat cctgccttgt attttatatt ccacattttt 181 ttttgctgtg cgtgcgtgcg gtgtgtgaac acttttcatt gttgtcattg caacatcatc 241 ccgaaagtaa atccaaagaa atccgaataa acagctgaag gcaaaaaaca agaacagcag 301 cgacgtggcc gagtacgtcg atgtcgtcgg cggcagcagc ggcgcaggca gcggcggcgg 361 cagcggcagc ggcggtaccg ccagcgtccc cgccccgctg cgcagtggcc gtcggcagcc 421 gtcgagcagc agcgccagca gcagcagcaa tcgcagtcgc agcgaaccat cgccgctcta 481 tgacaacaat cactatcatg aggagtgcct gcggtgcaat tcctgcggcc tgaacttgac 541 tgggcccaac caaaagaggg ccaggagatt caagaaccag atcctgtgcg acctgcattt 601 cgcggacgtg gccctaatgg agtgctccga tttcatgcag cagctgcgga gcttcaagcc 661 gcaatccttg ggctgcgcgg tggccaggcg caagagctcc acgacgctga tattcccgct 721 gccaccgcaa gcttgctcag atgagttctg cgaggagtat ccgcacaacc tgatgcccac 781 acctggctac tggatcgagt gctcccgcca gaagatcacc atgcccaccc cgcacaccat 841 ttgggatgag agcgactcgg agcacgagga catccgggcg ggcagtgcca gcgatgccta 901 tctggagcgc gagtgcagcg atctctacga ggatgacgag gactccgagg ccacgcccag 961 tccgcgcaag aagaccacca tcgaggagca gtgggaccaa cagggcgcct tcgagctgat 1021 ctccgtggag caggagacgt acgaaaagta cttctacggc accgagcact ggaactactt 1081 taccagcgac gaggacctag gtccggtcat cctgtccatc aagcaggaga cgctcaacgg 1141 acgggatcag ttccgcatcc tggtgcgggc tggatcctac acagtgcatg gactgatacc 1201 ggcgtcctgt gtgtttgccg atagatataa tcgcgaggag gtagttagat ctttaggtaa 1261 agaagttaat ttaaatccac ctttaacgtt aggacaatta cccgatacgc cagaggaatt 1321 attaaagtta gatcaggttt ttataaaatc agagttaaaa gttggcgtca tatttgtcaa 1381 agaggatcag tataccgaag agcaaattct ggacaataat gaaaattcac cgctcttcga 1441 cgaattcctc actctgctgg gcgatcgagt ccggctgcgg ggatttgata aatacaaagg 1501 tggccttgat acggtgcacg acctgacagg tctcttctcc gtctatacga actggcgcaa 1561 catcgagatc atgttccatg tgtccactct gctgccgtac gagaagcacg atccgcagaa 1621 gctccagagg aagcgccaca tcggcaacga tatcgtctgc gtggtcttcc tggaggccga 1681 taacacccgc ttcagtcccg cctgcatcaa gagccatttc ctgcacacct tcatcctggt 1741 tcgtgtttcg gctaggatca agcacaagcc gacgagatac gaggtgtccg tggtgacgcg 1801 cgacgaggtg ggcgcctaca agccctacct gtgggagcag tccgtcttcg agaaggggcc 1861 gatgttccgg gaatggctgc tgacgaagat cgtcaacggg gagagggcct cgtattcggc 1921 accgaaattc gcacgaatgc aggagcggac gcgatcgcag atgctcgagg atctggtgat 1981 gaatctatcg aatcacgcgg aaaccggaca gatacccaag ccatatcgac ggggcagctg 2041 gcggccgatc ggtcacatgc gaccctcgtc gccacttctg gactccgttc gcgatcaatt 2101 cgaggactac gatcagctgg ccaaggactt tacccgcgta ttcctaaacg aagaaccatc 2161 gtgcctgacc aacgcccatc tgttcgatgt cgtcttcctg gtgggtcagt ccaagcagaa 2221 ggctcgattt atcggagtcc gagccattct tggtgtgcgg agtcgagtat ttcaggaaat 2281 gctatacggc atccagacgg gcttcggatc gccgcagatt cccgtggcgg agatcttcgc 2341 ccggccggct ccctcgctgg tctccccgca gaaccagaag cccaagagca acaactacct 2401 gaccgttccc gactccgatt ccattcggcc gaagagcgtg ccctcgtcgc cgatggtgaa 2461 gagggccttc tcccggctgg ggaccattac ggccggatgg ggacgatcga tacggaacaa 2521 gaacaccaac cagctgaatc ccgacgacaa gaagaagtgg atttcgtcga cagattgttc 2581 gaacagggac agcaaggaca aggacaagga caagccgggc aacaaccagc tggccgtgcc 2641 acgcctctcc gtctgcgccg acgcccagaa ggtcgatcgc gccaagctgg cccaaacgga 2701 gttcaacatc atcgagttcg atccggacac gttccgggtt ctgctcgact acctgcacac 2761 gggcacctgt ccgctgacct gcgtctccat accaggcctg ctgtgcgccg ccgagcacta 2821 cgacctgccg gagctgctgc aggcgtgctt ccaccactgc aagcagttcc tgcgcatcga 2881 ggtggtctgc ccgatgctca tctcgctgga gaactactac tggcgctaca catccgcctc 2941 cgagctggtc aacatgatcc tgtcgttcgt ggagagcaag gcgcactcgc tgttcaagtg 3001 cccggaattc ctgcatctct ccgaatcgat ggtccagatg atcatgtgcc gggagctgca 3061 gacgccggag atccgcaaat tcgaggcgat gctggcgtgg gcgcagcaca aggtgggcaa 3121 gctgaagaac catccgaaca aggacaccca gttcgagttc gagtgcatca tggagcggct 3181 gacgcgggat ctgaacctgt gccgcatttc gcccagcgag ctgctcaccg tcgtcctgcc 3241 ctccaagtcg atgaagaacg aacgcatcat ggagacgctc atggtgcagg tgaatctggg 3301 cacctaccgg atgcccgagt tggatgcgta ccgtcagcag ttgcgccagc aggagtccgc 3361 cgaggccacc gtccaggtcc accggggtgg atgagacagt aagaatgtga gtttcgattt 3421 ggagcagcag cagcagcagg agcagcaatc ggattcggat gccacagtag ccagtagcca 3481 tcaccatcta aatcagaatc agaacca