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PREDICTED: Drosophila takahashii unc-119 lipid binding chaperone


LOCUS       XM_044394496            2434 bp    mRNA    linear   INV 09-DEC-2024
            (unc-119), mRNA.
ACCESSION   XM_044394496
VERSION     XM_044394496.2
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_044394496.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2434
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2434
                     /gene="unc-119"
                     /note="unc-119 lipid binding chaperone; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:108060327"
     CDS             780..1595
                     /gene="unc-119"
                     /codon_start=1
                     /product="protein unc-119 homolog"
                     /protein_id="XP_044250431.1"
                     /db_xref="GeneID:108060327"
                     /translation="MSVVGKQLNPVQSSSAAAVAASSSAAAGSSSSSAGSGAEANGGS
                     GGAAGAAASGGGGGGGASNDSKRSAEPSSVSPDEVLHLTKITDDYLCSANANVFEIDF
                     TRFKIRDLESGAVLFEIAKPPSEQYPDGLSVEETMLAAAEELSLEDTADPNAGRYVRY
                     QFTPAFLNLKTVGATVEFTVGSQPVNNFRMIERHFFRDRLLKTFDFEFGYCIPYSKNT
                     CEHIYEFPNLPPDLVAEMISSPFETRSDSFYFVENRLVMHNKADYAYDGGIIV"
     misc_feature    1062..1574
                     /gene="unc-119"
                     /note="GMP-PDE, delta subunit; Region: GMP_PDE_delta;
                     pfam05351"
                     /db_xref="CDD:428436"
     polyA_site      2434
                     /gene="unc-119"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gccaaaacgg tcacacctcg gggaggaaaa aaaggtgcaa tgtttaacgt tatttaaatg
       61 tgctaagtgg agttgcattg cagacgacaa caacagaaac aagagcagtg tgaaatgccg
      121 gcacaattga tttaattgat tcaatcgggc agcgcagcgg cagagcagca acaacaagaa
      181 caacaaacat aaactaagct ccacatatac agacacacat acacacggat acaaggccct
      241 aatacaaagg acgaaaaaca aacggaaaag ggaaaaataa acacaaagga aaaaaggaga
      301 ggaggaggaa aaaggaaaag cagcttttcc tgaaattggg tcgcgccttg caagcttcat
      361 ttgttgtcgt tgctggtgat tttcattccc tttgttgttg ttgtgtgtgt gtgcatttgt
      421 tgttgttttt gttgttgctg ttgctggcag ctaaatgtta tggcaacact tgcaacttgc
      481 atttgtgtgg agtgaggagt ggaaagcgaa aggataatac caagagaatc ggggaagtcg
      541 gacggaagcc ttatatttcc accagaaaat cctggcacac tttatggcat ttctacgctt
      601 gtgtgtgtgt gtggagtgag ccagcggagt agcttgaaag ctagacgata cagtcactgc
      661 tacagccagc cagtcaggag ccttaatctc caccagaaac tgttcagctc cccggaaacc
      721 cgagtccgga aaacccagat acccgtatac acaataaata ccaccaatcc gcgtgcaaaa
      781 tgagtgtggt gggcaagcaa ctgaatcccg tgcaatcctc cagtgcagct gccgttgccg
      841 catcgtcctc cgcggccgca ggatcctcgt cgtcgtcggc gggcagcgga gcggaggcca
      901 acggaggcag cggaggagcc gcgggagctg ccgcctcggg tggcggcggc ggcggaggcg
      961 cctccaatga ctccaaacgc agcgcggagc catcgagcgt cagtcccgac gaggtgctcc
     1021 acctgaccaa gatcacggac gactatctct gctccgccaa tgcaaatgtg ttcgagatcg
     1081 actttacgcg gttcaagatc cgcgacctgg agagcggagc cgtgctcttc gagatcgcca
     1141 agccgccgag cgagcaatat cccgatggac tgtccgtgga ggagaccatg ctggcggcag
     1201 ccgaggaact gtcgctggag gacactgccg atccgaatgc cggacgctat gtgcgctatc
     1261 agttcacgcc ggcatttctc aacctcaaaa cagtgggagc cactgtggaa ttcactgtgg
     1321 gcagccagcc tgtgaacaat ttccgcatga tcgaacgcca cttcttccgc gatcgcctgc
     1381 taaagacctt cgactttgag ttcggctact gcattccata ttcgaagaac acgtgcgagc
     1441 acatctacga gtttcctaac cttccacccg acctagtggc tgagatgata tcgagcccct
     1501 ttgagacgcg ctcggacagc ttttactttg tggaaaaccg actcgtcatg cacaacaaag
     1561 ccgactacgc ctacgatggc ggcattatag tctaaatacc caactaaagt ggaactaaaa
     1621 ctagagcaaa actaataact aaagaactaa aaactacaaa tgctgtgaga caaaatcaat
     1681 gacttgtcac acacacaaaa caaaacacac acacgaaaca cttgaaaaca cccactaaaa
     1741 actcaaattg aaaatggaaa aatgaaaaaa tgattaatga aaatcaagaa tcacactcac
     1801 aacacatcga atcgaatcga ggaatattgt cacagccatt ttagccttag cacaagagtt
     1861 ttacccacca ttcctgtttg atgtatttag caaggataat gactcctgta cacacacacc
     1921 aacacaacaa caacaacaaa caaacaaaca cacactgaag cacgcggact gtgttcattt
     1981 atcaatgatt tcaactttga ctatataatt ttaagtgcaa tgtgatttcc cctgatttat
     2041 atctgtattt atacacattt atttattcct aataattaag tacactcaca cactcccaac
     2101 aagaaacata catatatata tatatatatt atatataaat acatacgtat acacacacga
     2161 aaccaaagaa aatttcggaa aaattgagaa aaacacttgc cgtcaatttt tgtatgcagc
     2221 atacgatgat caggcgagat ctatcagctt cttcatggca tttttttttt cgtgtctgtg
     2281 tatgtatatt tttaaagaaa tgaaaagaaa agaaaaaaac cagatgagag aacaaaaaat
     2341 ggaattctga aaaatctaaa gaatctaacg atcacacgcc gaacaagaat gataaattaa
     2401 attacatttt aaatgtacat acaccactac aaaa