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LOCUS XM_044394323 2064 bp mRNA linear INV 09-DEC-2024 7 (APC7), mRNA. ACCESSION XM_044394323 VERSION XM_044394323.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044394323.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2064 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2064 /gene="APC7" /note="anaphase-promoting complex subunit 7; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108054392" CDS 50..1942 /gene="APC7" /codon_start=1 /product="anaphase-promoting complex subunit 7" /protein_id="XP_044250258.2" /db_xref="GeneID:108054392" /translation="MENALFANVKRLYDHKLYECVIPLAKLLITVLKNDRNVATLELE YQVQLYLVNSQYKERHHRSASRHFVDLFHQRRLMNHRRHKSAGLLAIESAYPEFGEVE LRRRHAECYREIGDPDMALGTLLQVPVKSRTPRINLMLARLQHHCLGFGNTNKTKSLP AYKEVIRECPMALPVIQDLLELGEDGNEVNSLVMHAASVPGNFDWLRTWIKALAQMFD CKHQDAARTFQRLQDNTLLRCNEQLMMALGRCLYYDGSYAQAEQFFAATVSANSENIE AIGLLAVVRGQDSFNSNRTDMDRLYAQVTAEPKYTAEHWFVHAQSMYDAGKFERGLSF VGQCLNSEPRHQEALILRGRLLISLERFLEAVEAFRMAQKVAPYRFEVYRGLFHSYLA AKRFKEAHAMCNWALRIFPNSPRGLTMFGRTLFHSPDPQIKKSARKFAEKSLKIDPNY TPAVTLMADICQLEGAIQASIKLLEDHVLLFPQANLFTNLADMLRTQKEPLRALEYYY KALGKNPKCERTLRGISLLKSSNSLIGGGGGTTVLDESGPPPPIKVVVISQLTSNGPP LAATPCGTANLDNWMGVDGAENSREATSSPAARSGQDVDGDGDGDGSVWHDVDAEMVN LNYDGH" misc_feature 326..>409 /gene="APC7" /note="Family of unknown function (DUF6584); Region: DUF6584; pfam20225" /db_xref="CDD:466376" misc_feature 785..1591 /gene="APC7" /note="Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain [Cell wall/membrane/envelope biogenesis]; Region: LapB; COG2956" /db_xref="CDD:442196" misc_feature 983..1069 /gene="APC7" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature order(986..988,995..1000,1007..1012,1016..1018,1088..1090, 1097..1102,1109..1114,1118..1123,1190..1192,1199..1204, 1211..1216,1223..1225) /gene="APC7" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature 1082..1174 /gene="APC7" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 1187..1273 /gene="APC7" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 1289..1384 /gene="APC7" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 1400..1474 /gene="APC7" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature 1499..1582 /gene="APC7" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" polyA_site 2064 /gene="APC7" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tggggaacta gtggagcctg tccgacattt tcgagaagtc gtggaaaaaa tggaaaacgc 61 tctatttgcg aatgttaaga ggctttacga tcacaagctc tacgagtgcg tgattccatt 121 ggcaaagctg cttataacgg tgctcaagaa tgatcgcaat gtggccacct tggagctgga 181 gtaccaggtg cagctctatc tggttaattc gcagtacaag gagcgacatc atcgctcggc 241 atcgcggcac tttgtggacc tcttccacca gcgtcgtctg atgaaccaca ggcgccacaa 301 gagcgccggt ttgctggcca tcgaaagtgc ctatccggag ttcggggaag tggagctgcg 361 gcgccggcac gccgagtgct atcgcgagat cggggatccc gacatggccc tgggcaccct 421 gctccaggtg cccgtcaagt cgcgcactcc gcggatcaac ctcatgctgg ccaggctgca 481 gcatcactgc cttggcttcg gcaacaccaa caagaccaaa tccctgcccg cctacaagga 541 ggtcatacgc gaatgcccca tggccctgcc cgtgattcag gacctcttgg aactgggcga 601 ggacggcaac gaggtcaact cgctggttat gcacgctgcc tcggtgcccg ggaactttga 661 ctggctgaga acgtggatca aggctctggc ccagatgttc gactgcaagc accaggacgc 721 ggcgcgcacc ttccagaggc tgcaggacaa cactctgctg aggtgcaacg agcagctgat 781 gatggccctg ggcaggtgcc tctactacga cggcagctac gcccaggcgg agcagttctt 841 tgcggccacg gttagtgcca attcggagaa tatcgaggcc atcggtctgc tggccgtcgt 901 tcgtggtcag gactccttta acagcaacag gacggatatg gatcgcctgt atgcccaggt 961 caccgcggaa ccaaagtaca cggccgaaca ttggtttgtc catgcccagt ccatgtacga 1021 tgctgggaaa tttgagcgcg gcctgagttt cgtggggcag tgcttgaact cggagccccg 1081 tcaccaggag gccctcattt tgcgcggccg tctgctcatc tcactggagc gatttttgga 1141 ggccgtggag gcctttcgca tggcccaaaa ggtcgctccc tatcgattcg aggtctatcg 1201 cggcctgttc cacagctatt tggccgccaa gcgattcaag gaggcccatg ccatgtgcaa 1261 ctgggcactg cgtatttttc cgaattcgcc caggggactt acgatgtttg gtcgcacact 1321 tttccactcg ccagatccgc agatcaagaa gagcgctcgc aagtttgccg aaaagtcact 1381 gaaaatcgat cccaattata cgccggcggt gaccttaatg gccgatattt gccaactgga 1441 gggtgcgatt caggcgtcca ttaagctgct ggaggatcac gtcttgctct tcccgcaggc 1501 gaatctattc accaatctcg ccgacatgct gcgcacccaa aaggagccgc tcagggccct 1561 ggagtattac tacaaggcat tgggtaagaa tcccaaatgc gagcgaactt tgcggggcat 1621 tagcttattg aagagctcca actcgctcat cggaggagga ggaggaacta ctgtcttgga 1681 cgaaagtgga ccaccaccac ccatcaaggt ggtggtgatt agccagctga cctccaatgg 1741 accaccactg gccgccaccc cctgcggaac agcaaatctg gataattgga tgggtgtcga 1801 tggtgcggag aactcccggg aggcaacctc ctcgccggcc gcaagatctg gccaggatgt 1861 cgatggcgat ggggatgggg atggctccgt ttggcacgat gtcgatgcgg aaatggtcaa 1921 cctgaattat gacggccatt aggcgaggtt cagatttgtt atttcaagaa atttagaatg 1981 attatgatat ttatacacaa cctcaagttg gatttaagat tctatgaaga gtgccatcta 2041 gagtatatta ttatttttcc ttaa