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LOCUS XM_044394236 9036 bp mRNA linear INV 09-DEC-2024 calcium-activated potassium channel (SK), transcript variant X7, mRNA. ACCESSION XM_044394236 VERSION XM_044394236.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044394236.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9036 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..9036 /gene="SK" /note="small conductance calcium-activated potassium channel; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108058158" CDS 714..3641 /gene="SK" /codon_start=1 /product="small conductance calcium-activated potassium channel protein isoform X7" /protein_id="XP_044250171.1" /db_xref="GeneID:108058158" /translation="MSIQKLNDTTNSGYVSSEETDSLLVSSSNPSKGGGRTALLRQVK SSSTNGPTTGASTSSSGSVTGSGTGTGSGSGGGSGSVSASGSNSTAGGGTGASKPTLM RQDRTSTYLTSPQQSQHVRMGSEESMRGGGGGGGGGATAHDEDVEQGLQVRSSIVPDI EVHEEDQERGSTTTTTTITTNNQQPTISIMNLSLKPGESHSHSHSSSPGSHPNLGTSS YQNLASSIPPSVPSRCRACRNCSRRASTTPTTLIDRSASRDSVKSAFQQGNLSGSMAI CISNSALPQQQQQQQYHLQQQQHYQLQQQHLQHQQHLQQQQQQQVPPVLITSSPTNGS RIIRQSSQPESSSTAICCGPHSACVGHAHSHSHTVPNVSLKQLRESSGDGIAGIAADS LRINGGMRPFKQGVLLMPRTLSDSRKLRLRRAFTEATNETLQCSKMLRKPASTLSIPG SMKTPSIANREQISSGCNEEAAEALVGIHSDYPRYEMYMEERALTGGNTSRKPSTNSA KHKPNVGYRLGKRKALFEKRKRISDYALVMGMFGIIVMVIENELSSAGVYTKASFYST ALKTLISVSTVILLGLIVAYHALEVQVRLFMIDNCADDWRIAMTWQRISQIGLELFIC AIHPIPGEYYFQWTTKLANKNKTIGTEMVPYDVALSLPMFLRLYLICRVMLLHSKLFT DASSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTLRQCERFHDEE HANLLNAMWLIAITFLSVGFGDIVPNTYCGRGIAVSTGIMGAGCTALLVAVVSRKLEL TRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRVNPGRVRTHQRKFLL AIYALRKVKMDQRKLMDNANTITDMAKTQNTVYEIISDMSSRQDAIEERLTNLEDKMQ SIQEHMESLPDLLSRCLTQHQERIEQRRNFLHPDTAAVAPIQAPTPQSMFNAAPMLFP HSS" misc_feature 2265..2603 /gene="SK" /note="Calcium-activated SK potassium channel; Region: SK_channel; pfam03530" /db_xref="CDD:460958" misc_feature 2865..3104 /gene="SK" /note="Ion channel; Region: Ion_trans_2; pfam07885" /db_xref="CDD:462301" misc_feature 3144..3368 /gene="SK" /note="Calmodulin binding domain; Region: CaMBD; pfam02888" /db_xref="CDD:460739" polyA_site 9036 /gene="SK" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caaacaacac taacggaaac atcaacgtga aagcgagacg gacgccctcc gtcccgttat 61 atgctgtgtc tgtctgtctg tctgtgtgtt gagagttcta cgtcgcgcac tccaaaaaaa 121 aaaaaaacca aaaaaaaaaa tcaaaaactt taacactcgc atacacactg gcacacacaa 181 acatacacac acatacatta atatatatag ttaaaaaaaa attatataca aaaagaaaag 241 aagtgcaaga aaaataagcg cccactgcgg ccaatggaaa tgccaaagaa aatgcagcag 301 caacaaattc gacaacaaac gcaaattcta cagcaacaac aacaacaaca agcacagcca 361 cagcagcaac aactgcagtt ccccaataca taggtccacc gattttccgt ctttgtcgcg 421 cgcgttcaca cacacaaaca cagtcacaca ctgggacaca tgcatgtgca taaatggcaa 481 tatggacgaa gagcagcagc agcatttgcc ttgtattggt ataccagcac agtgacacgc 541 gcgtgccaaa tattgccgat tttatcacac gaacaacaac aacaacaaca actgcaacaa 601 cagcaacacc agcgggacca gctattaact aaaggagcca ttacaacaac aaagaccata 661 gcaacaacaa caagaacaac gaacattgct ggaaggcgtc gcaaaatatc aaaatgtcaa 721 ttcagaagct aaacgacacc accaactcgg gctacgtgag ttccgaggag acggactcgc 781 tgctggtgag cagctcgaat ccctccaagg ggggcggccg gacggctctg ctgcgccagg 841 tgaagagtag ctccacgaat ggcccgacga cgggggcatc cacctcgtcg tcgggctcgg 901 tgacgggatc gggaacagga actggttctg gttccggtgg aggatcagga tctgtatcgg 961 catcgggctc gaattcgaca gccggcggag gaactggggc ttccaagcca acattaatgc 1021 gccaggatcg cacttccaca tacctaacga gtccccagca atcgcagcat gtgcgaatgg 1081 gctccgagga gagtatgaga ggtggaggag gaggaggcgg aggaggagcc accgcccacg 1141 acgaggatgt ggagcaggga ctgcaggtcc gcagcagcat agtgcctgac attgaagtac 1201 acgaagagga ccaagaaagg ggatcgacaa cgaccacgac cacgatcacg accaataacc 1261 aacaaccgac catatcaatt atgaatttaa gcctgaagcc cggcgagagc catagccata 1321 gccacagctc cagcccgggc agtcatccca acttgggcac ctcatcatat cagaacctgg 1381 cctcgagcat accgcccagt gtgcccagtc gctgccgggc ctgtcgcaat tgcagccgac 1441 gtgcttccac cacgcccacc accctcatcg atcgctccgc ctcccgcgat agtgtgaaaa 1501 gtgccttcca gcagggcaat ctcagtggct cgatggccat ttgtatatcg aactccgcgc 1561 tgccgcaaca gcagcagcag cagcaatatc acctgcaaca gcagcaacac tatcaattgc 1621 agcagcaaca cctgcagcat cagcaacatc tgcagcagca gcagcagcaa caggtgccgc 1681 ccgttttgat cacctcatcg ccaacgaacg gatcccggat tatacggcag agctcacagc 1741 cggaatcgag cagcacggcg atctgctgcg gaccccattc cgcctgcgtc ggccacgccc 1801 actcgcactc gcacacggtg cccaatgtct cgctgaagca actgcgcgaa agttccggcg 1861 atggaatcgc gggcattgca gccgactccc tgcggatcaa tgggggcatg cggcccttca 1921 agcagggcgt tcttctaatg cctcgcacat tgtctgatag ccgaaagttg cgccttcgca 1981 gagccttcac cgaggccact aacgaaacgc tccaatgctc caaaatgctc cgcaaaccgg 2041 cgtcgacact ctcaattcct ggctcgatga aaacaccttc cattgcgaac cgggaacaga 2101 tctcatctgg atgcaacgaa gaagcggccg aggcactagt gggtatccac tcagactacc 2161 ctaggtatga aatgtatatg gaagaacgtg ctcttactgg cggcaatacg tccaggaagc 2221 catcaacaaa ctcggccaaa cacaaaccca atgtgggcta tcgcctgggc aagaggaaag 2281 ccctcttcga gaagcgcaaa cggatcagcg attacgccct ggtcatgggc atgttcggga 2341 tcatcgtgat ggtaatcgaa aacgagctga gcagtgccgg tgtctacaca aaggcatcgt 2401 tctactcgac agcgttaaaa accttaatat ctgtttcgac tgtgattctt ttaggactta 2461 tagtagctta ccatgctttg gaagtgcagg tgagattatt catgatagat aactgcgccg 2521 acgattggag gatcgcaatg acatggcaac gaattagtca aatagggtta gaacttttta 2581 tatgcgctat acatccaatt cctggcgaat actatttcca gtggacgacg aaattggcca 2641 ataagaataa aacaattggc accgaaatgg tgccatatga cgtagcttta tcattaccta 2701 tgttccttcg attatattta atctgccgcg taatgctgct gcattcaaag ctattcacag 2761 acgcatcatc acggagcatt ggcgctctca ataggattaa ttttaacaca agattcgttt 2821 taaaaactct aatgacaata tgcccgggaa cggttctatt ggtcttcatg gtctcgctgt 2881 ggatcatcgc atcctggacg ctgcgtcagt gcgaaagatt tcatgatgaa gaacatgcga 2941 atcttttgaa tgcaatgtgg ctgatagcga taacattttt gagtgttggt ttcggtgata 3001 ttgttccgaa tacgtactgt ggacgtggta tcgctgtcag tacaggaata atgggcgccg 3061 gctgtacggc tctactagtg gccgtagttt cccggaaact ggagctgacc cgtgccgaga 3121 agcatgtgca caacttcatg atggacacgc agttgaccaa acggctgaaa aatgctgcgg 3181 cgaatgttct gcgtgaaact tggctcattt acaaacatac aagactagta aaacgggtta 3241 atcccggccg tgtaagaacc caccaaagaa agttccttct agctatatat gcgttgcgaa 3301 aagttaaaat ggatcagcgc aaactaatgg ataatgcaaa cacaataact gacatggcca 3361 agacacaaaa cacggtctac gagataatat cggacatgtc tagccgtcag gatgccatcg 3421 aggagcgcct aaccaacctg gaggacaaaa tgcagagcat acaagagcac atggaaagcc 3481 ttccagacct attgtctcga tgtctgaccc agcaccagga gcggatcgag cagcggcgga 3541 actttttaca tcctgacaca gctgcagtgg cccccattca ggcgccaacg ccccaatcga 3601 tgttcaatgc ggcgcccatg ctgttccccc attctagctg aatatcagaa agagagcgct 3661 ccaactccgt gattaacatc gagatgctaa caataaggcc ggatcgatgc tggccaacat 3721 cctcatcaac atcaacatca aacgcacccc agaaatcagc attaccatca acatcaacat 3781 caatgtctac gtcaaaggca aagtctaaac ccgaattcga aatggccgag acagcgctca 3841 ggcaacgtgt gctatcgccg tcgttatcgt tattgaaatc atcgtcacaa gaccgcaatt 3901 tgcatcaaat aagtgggcgg caaatggaaa tggaaatggc aatggaaaga gagatagtac 3961 caatatcaat accaatacca gtgatacccg aagatgccga atcgaatacg aatagcaaca 4021 gttcgcccga tcagcaaaat gtgcagataa gtacagtacc gccatcgagt tcaacgcctg 4081 ctttcggaac tagcggtgca actagcgatg gcattgtcaa atcgataacg atgaacgaac 4141 cgatgacgac ggagagcggc aaaccgattg cctcgaataa gtttactagg aaaagagaac 4201 gtgtatgcaa taatagtagt taatagtgct aggctatagt gatagtaata atagaggtaa 4261 tagtaatatt agtaattcta caagtcgaat ttcgaactcg gccttttgta aataagcctc 4321 ttcgagatga gaaaaaaagt caaatgttag catatacata taatatacat aaaaccaccc 4381 acacacacac acttcctata tatctgtata actgtatgga tgtatagcac tccccgaaaa 4441 cggaaaaaga aaacccctta aaaatatccc aaaacaagaa aaccaaaaaa caataacaga 4501 aaaccaaaca gaatatatgt atacatatat atacaattgt gtaaattttt ttttctaagt 4561 tttaggctaa ttgtatttgt aatatttcac cttgggccaa ggcagcctgt acttgcatac 4621 taaaattcat ataccataac atagcataga gtgtgtgtgc atgtgtgaat gcgagtgtac 4681 agggcgagaa tggagagtag aaggtaaggt cataggacat acaaacatat atagatcgta 4741 ggacaccagc atgtacgagt agaatcgaag tatataaacg aattacgctc agcaaggcag 4801 aaatagcaat agtaaacctg gaaaatctgg caccgtcagt atatcccttg tagaaccgca 4861 atcctaactc aaatgggcca acgagatccc ctgctgcccg ttgcactttc ctttccgttg 4921 catatccaac aaccaaccag caatacatcc acaaacatgg caaattctag tgtccgtctg 4981 tctcaaattt gtgtgtaaat atatatgcat atatagcagt atatatatat gtatccgaag 5041 gatgtgtgtc tgacctgact gtgtgtaacc catgcgaccc atacaaacca ccacccccaa 5101 caattatatg aaaaacgaag aagaaaaaac aaaaacccca aacccagaac aatgaaaaac 5161 tatctaactg taaaatgtat gttacgagat ttagaaaaaa cagcgaaacc agaaaaccaa 5221 atactaagag atataaacta aagccgaata aaagaaaaac tgtggaaaaa acgcaaaaac 5281 cgaggataaa gaaaaactta cacacaaaaa tgagagttct tacttaacat ctactagctc 5341 tggctttaac taaacttacg aaacatgttt aaaggaaaca agtttgttgt tgtcttcttt 5401 ttctacgcat atattacaat atatatagta tatatacata tatattttcg ttgttgttgt 5461 ttttggccta ttcttttcta ccaagaatta tgaactcaat taagaacctg aatagctttc 5521 gaaggaaatt gaagatgaag acgatgatga tgatgatgat ataatgatat agtagcgtag 5581 acaaaaccaa gaaacaaatg atatgaaatc gaaaaacgaa ctatttagta tagtctacat 5641 actaaagtga acaattttaa ttgcaatttt gtaacatatt aaaagtaatt cgcattaatt 5701 tacaaaaact agctggtaaa tgtgtaacaa cggaacaaac tacaagctcc agatggaaaa 5761 taatagaacc gaaatgggga gaagcgaatt gaaattgaat tgaaattgaa gtggaggtgg 5821 aactggaaat ggaaatggaa atgagtagag cagattagtg tagacataat agcagaagtg 5881 gccgagctac gtaaagattt tctaaagatt ctaagaggaa cattatatat actatatact 5941 tactataaag tattaactga gagcatcgaa gttatttaaa accaaatgaa aaacgaatgc 6001 aaaaagaaaa agcaagcaat taggtaatat gcaaccttct aacgctttgt taggatccca 6061 tcccaaatgg aaggcaaaag agatatacaa ctgaattccc cgaatagtgc ccccacctcc 6121 ccagaatctc ccgttcccat caccccaacc aaaaatcccc caaagtcagc aagacagact 6181 ctgcatatta ttatacagaa ccagggccag aaaggatcaa aatatctgta aactatagat 6241 tatatagccg taggattcag tccacttaag ccaactaata aaagtataga agttttgcca 6301 cactgattta ccacatctcc aaaacccctg gcttcagttt gtttctatga aaattaaaac 6361 cccacaacca taaagtttcc caattgtctg atagatctta acttatatac atacaatgaa 6421 aatcccagac cagcaaagga gtcaaaggag aacaaacaac aaacaagaaa caaacaaacc 6481 aactaaatga acccttaaac aaatgtgtgt atacctattt ataatattga atatttaaat 6541 tgaaaagaac gttcaagact gctgtcaaaa tagctttatc acaataaata acaaagatct 6601 acacaagacg acacacacca aacagaacag aacagaacag atcagaacaa caatactaaa 6661 ctgatcgata agtatcgttt atcgaatcgg aacagacacc taaagataca cacaacacac 6721 agattctgat acgagatatg gaatgcgccc agctttaacg ttatgtattc gtgcatattt 6781 gggtttcaac tctacaacaa cttaaaacga atacgcaaaa gaatactgaa caaagatcga 6841 tatacgatta acgattaaca attaacgata tacgaatcaa atcaaatcga attgaattga 6901 ataattggta caagatcaaa ttcccgtttg aactggtttc ctaagcccca caaaatacct 6961 ttaaacacga gataaaaacc aaaaactttg atatgaggga ccgaatttcc aaagacaggt 7021 ctttattata caaaaaaccg aacaacctaa aaccaaaagc aaaagcaaac caactaacga 7081 agaattccta caaaaaaaaa caaaacccat aacagtaaca atttataata ccgaagattt 7141 ttagccgctt ttgagctgga ttatgaaaag aaaaaggaat agaaaaagga aaagagaaaa 7201 acacaaataa ggatcgtatt gcacaatgtc cttggttgac ttccgtaaca tcatatagac 7261 acaggtccga gtcccacgtc cagttttagt gtgtattgtg tatttccgtt caccttaatc 7321 agaattgaat cgaaaaatat atcaactttc ttttcttcag cgaatcatag agctcaaggg 7381 gtacttcgag aatcacgctt caaccgaaac tcttctagcc aaaccaggtc caatagaact 7441 tacatacata tagcccagcc aatgccaatg ctacaaacca aaaaaaaaaa tggattcgag 7501 ttttcgaaaa cgtatcgaac cggattatga cgaaaagggc agccattttg gtgaatttac 7561 acgctaggaa ctagaaaagg gtcctcccaa acaccaaata ccccccaaac tccataaccc 7621 ctccccctcc cccaccccct gtgcgcccaa ctagatcgag gtatgcaaaa tatataaggt 7681 tacatataca atatctagat atacaacaca catatactcg tatatacatg tacagacggt 7741 ctatgaggta tataccaaac ccaagaaagc ccaaaaacca aaaaccccac actaataaga 7801 tcatatttga ctttatatgt attatagtaa tgtattcagt agctaaatcg aaagccgaag 7861 caaagaccaa tttattaaca acaaactaat aagataaccc ccaaaatgga aaacaattat 7921 tatgttaaat taaaccatta aaatctaaga gggaggcaaa acaatttttt tattgaaaaa 7981 aaaaaacaag aaaaacaaaa caaaagaaaa caaagtaaac tagaatgcat tgcatgaatt 8041 aaataaagag aaaaaaacta atagaaaccc aaaacttaac taacgaaggt caactaaaac 8101 taaacttaaa cttaacctac tctaatgcta aaattgaagt aaaattaact taaaaccact 8161 aaaaggaaaa aagatttaat ttctaaaaga aataaagtaa gaaactaaaa caaagtaaac 8221 agaaaaaaat tcagtggcta atgaaatagt ttattttgaa tttactgtat tgtatattta 8281 aatttaaaca aaaaagggaa accccaaaca aaatatattg ttatatctta tcgaggaacc 8341 gtgttttgca aaagctttaa tatttagggt gcctacattt gctaaattag tattttacga 8401 tttaaaactt aaagaaaaaa caaaacaaat actaaaacca acacctacat acacgaaata 8461 gtataaagct tgattgaaaa acgaacccaa aaagttagga acgtgaattt ccaaaacgat 8521 tacactgaac aaaaagaaaa ccgaaaccaa aacaaattaa gaacaactaa cagctaaagc 8581 aaatattgta tttgtatttg agatatgaat tttaagaatg tttattagac ttacggttgg 8641 ttattttgta tacatatata tattatatgt attatgtatg tagtataaac tgatctgatc 8701 tgacgacgat tgtaattgtt tttttttttg ctcattaagc atttacctca taagaattcc 8761 cactatttat agcaaattta ccatattaca taaaatcaat tgctgtactg ttataatgta 8821 caaccccaag gaaacgatat gtaggacgag gaagaaccat aacaagagag agaaatcgat 8881 aaaagtcgag gggcaagagg aaaactcata aaactgtaaa ttattaatta atgaagaaaa 8941 aaccaaagag aataattgaa attttaacaa taataaaggg ctttgtatga aagaaaaaca 9001 aacaaaaact gaataaaaat gaaataaaag taacaa