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LOCUS XM_044394227 4042 bp mRNA linear INV 09-DEC-2024 (LOC108060281), transcript variant X1, mRNA. ACCESSION XM_044394227 VERSION XM_044394227.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044394227.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4042 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4042 /gene="LOC108060281" /note="uncharacterized LOC108060281; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108060281" CDS 28..3897 /gene="LOC108060281" /codon_start=1 /product="uncharacterized protein isoform X1" /protein_id="XP_044250162.2" /db_xref="GeneID:108060281" /translation="MSQRQRRLSFNHHPSENTGVAHEMPNTERPRARPKLRNRNRIRA RPATPEDVLENHLQKLFEEQELLHNLLISHRPGIKAQLEDLGGESNYEFDTQDEEADE EKQLNFKPVDENPKDFSGQPDNVILAEDVEEDYSDPPKFEDLPILPPRIYPHCKNHIT SAIPLPILVGKCTAPKVDGQGYDPPFLYPDFIAKNEKSRVKYIFTLVDSLVQQMERFL KLNEHSVGEGAKKKRPTGTVPKSKSQNQFKIDQVGHAKYTIIVKPRLREPKQHNQSKN HRLAKSKMPKSKPETNPELDLDLDLDCEFGMEHIEKFRANTVRDEKPGKSGTKKKVQE KPAENAEGAEKEEEEEDEDTEVEEEREEKVMLVKLKKQEPIFETILSRPPSKKDEYSY MSILEAGLAKARRKQLRREKKYGNVTPRPSTPSTRPCTPIEEPPAAPKTSKHSTFYEL FAAQLDAGQLERSTLTPWRLLQARGPPPLKSWQREIVRFVREYKKETKRRQRMKERVR MGKKPMAKRKPKTLLEEVLGKKGSRRELLHRKYHYVPIKLKKKRHRHYKAYKRQKEWF RAERQYKRILYLRIFRPDDLFKTKLTKREKWAQGRQFFNIRILDPVKPRKFPKTEVPE MPAEEEWSEDEEDPDASPRPMDKGQRLKNLLMESARLKRQEKLHHLVLPEDPLRAVYL PLLERRKSLVDNATEKIPEKEEPEKVEENQPEAVLETLDSARTFYSTSTTIELSNVPL SIATVSTLFYESKPPPIEAIEAKEAIENKAPEPIKKEKKAERKREKKERHHHRVGPKI RLPDDKAEFRRYFDLDGISLYILKRMSKMKPKKSRPRIEGRVRISNYLTHFYWQRLRR DDPYFHWFVNEGFYPAHYLTKLKELKDLQVQTNDQLDEEILQYIERMNKAVSEGEEKP LTLTWQMAHLMVTSYFCVLYHRATSKRRPVEERSLVRCRIAVSVVELYQQELSRGWGK DIRVNCRRLMSWARWHETRVRLIYEEALVNAEERSSIETCLVMRTPNLECLDEFYERR VMPRPDALAINPLAHKIRRYPQNKKIKKKNKRSVGKRHRKFPCPIQGCKMTLRSSVVM SHFLSDHCRRLQELWLTDRMVLMFYPSSYPPEQIYCICVLALLVRMPAKKAPIPRTII NDQLPSQYLYFAEHAPCFLMFAQVERSTIEEKPSADPKPNNRDSLYIFWLTSADFHLK NVVCRVYIYCQDRSLKGNSLLNFVSMSEFKSVAHLVKNQPGSYLAIDYKTMASLTKDF KELLFIEVRYLNKMVEHEDSNDETFDV" misc_feature 3238..3834 /gene="LOC108060281" /note="Domain of unknown function (DUF4729); Region: DUF4729; pfam15866" /db_xref="CDD:434981" ORIGIN 1 ccccatcatg tgagtaaaaa tttgcgtatg agtcaacggc aacgacgttt atctttcaac 61 caccacccat cagaaaatac aggcgtggca cacgaaatgc cgaataccga gagaccccga 121 gccaggccaa agctccggaa cagaaaccgg attcgggcca ggcccgccac gcccgaggat 181 gtgctggaga atcaccttca gaagctcttc gaggagcagg agctactgca caacctgctg 241 attagccatc gtccggggat caaggcccag ctggaggatc tcgggggcga gagcaactac 301 gagttcgaca cccaggacga ggaggcggat gaagaaaagc agctaaactt caagccggtt 361 gacgagaatc caaaggattt tagtggccaa ccagataacg taatcctggc cgaggatgtg 421 gaggaggact actcggatcc tccgaaattc gaagaccttc cgatccttcc gcctcgaatt 481 tatccgcatt gcaagaacca catcactagt gctattccac tgcccatttt ggtgggcaaa 541 tgcaccgcac cgaaggtcga cggacagggc tacgatccgc ccttccttta tcccgatttc 601 attgccaaaa acgagaagag tcgcgtgaag tacatcttca ctttggtgga tagtttggtc 661 cagcaaatgg agcgttttct taaactcaac gaacattcgg tgggcgaggg agccaaaaaa 721 aagcgaccca ccggaactgt tcccaaatcg aagtcccaga accaattcaa aatcgatcaa 781 gtgggtcatg cgaaatatac gattattgtc aagcctcgtt taagggagcc aaagcaacac 841 aaccagtcga agaatcatcg tttggccaaa agtaagatgc cgaaatccaa accggaaact 901 aatcccgaac tggatttgga tttggatttg gattgtgaat tcggcatgga gcacattgag 961 aagtttcgag ccaatacggt tcgcgatgaa aagcctggga aatccggaac caaaaagaaa 1021 gttcaggaga aacccgctga aaatgctgaa ggtgctgaaa aggaggaaga agaagaagat 1081 gaagatacag aggtggagga ggaaagagag gagaaagtaa tgttggtaaa gttgaaaaaa 1141 caggaaccga tattcgaaac aattctgagt agaccaccat caaagaagga tgaatactcg 1201 tatatgtcga ttcttgaagc tggcctggcc aaagcccgta gaaagcagtt gagacgggag 1261 aaaaagtatg gcaatgtcac tccgcgacct tcgacgccct ccacgcgacc ttgcacgccc 1321 atcgaagagc cgcctgctgc cccgaaaacc tcgaaacact ccacgttcta tgagctattt 1381 gcggcccaat tggatgccgg tcaacttgaa aggagcaccc taacgccatg gcgtctgtta 1441 caagccagag gacccccgcc attaaagagc tggcaacggg aaatcgttag gtttgtgcga 1501 gagtataaga aggaaacaaa acgaagacaa agaatgaaag agagggtcag aatgggaaag 1561 aagcccatgg cgaaaagaaa gcccaaaact ttgctagaag aagtattggg taaaaaggga 1621 tcgcgaaggg agctgctgca ccggaagtac cattatgtgc ccatcaagtt gaagaagaag 1681 cgccaccggc actacaaggc ctacaaaagg cagaaggaat ggttcagggc ggaacgtcaa 1741 tacaagcgaa tcctgtacct aaggattttc cgacccgacg atctcttcaa gaccaaattg 1801 accaagaggg aaaaatgggc ccaggggcgt caattcttca acatacgaat cctggatccg 1861 gtgaagccca ggaaatttcc caaaacagaa gtacccgaaa tgccagccga ggaagagtgg 1921 tcagaggatg aggaggatcc cgacgccagt cccaggccca tggacaaggg tcagaggttg 1981 aagaacctgc tcatggaaag cgctcgcctg aagcggcagg agaaactcca tcatttggta 2041 ctgcccgagg atcccctgag ggcagtctac ctgccccttc tagagcgacg aaagagcctg 2101 gtcgataacg ccacagaaaa gattcctgag aaggaggaac ccgaaaaagt agaagagaat 2161 caacccgaag cagtgttaga aacattggat agtgccagga ctttctatag cacatccacc 2221 actatcgaac tttccaatgt tccactgtcg atagccacag ttagcactct cttctacgag 2281 tccaagccac caccaatcga agcaatcgaa gctaaggagg caatcgaaaa caaagccccc 2341 gaacccatca aaaaagaaaa gaaagcggaa agaaagcgag agaaaaagga aagacaccat 2401 catagagttg gtcccaaaat ccgattgccc gatgataagg cggaattccg gagatacttc 2461 gatttggatg gtatttcgct gtacatcctg aagcgcatgt ccaagatgaa gcccaagaag 2521 agccggccac gcatcgaagg tcgcgtaagg atctccaact atctgacgca tttctactgg 2581 cagcgtttgc gacgcgatga tccgtacttc cattggttcg tcaacgaggg cttctacccg 2641 gctcactacc tcactaagct gaaggaactc aaggacctcc aggtccagac gaatgaccaa 2701 ctggatgagg agattctgca gtacatagaa cggatgaata aggcggtcag tgagggcgag 2761 gagaaaccgt tgaccctaac ctggcagatg gcccacctga tggtcacctc ctacttctgt 2821 gtgctctacc acagagccac ttcgaagcgc cgacctgtcg aggagaggtc attggtccgg 2881 tgtcgcattg ccgtctcggt ggtggagctg tatcaacagg aactgagtcg cggatgggga 2941 aaggacattc gggtgaattg caggcgactg atgagctggg cccgctggca cgagactcgc 3001 gttcggctga tctacgaaga ggcacttgtg aatgccgagg agaggtcctc tatcgaaacc 3061 tgcctggtga tgcgtactcc gaatttggag tgcctcgatg agttctacga acgtcgtgtt 3121 atgccccgac ccgatgcctt ggccatcaat ccgttggccc acaagatacg tcgctatccc 3181 cagaacaaga agataaagaa aaagaataag cgtagtgttg gaaaacgcca tcgaaagttc 3241 ccttgtccca ttcagggttg caagatgact ttgcgctcca gtgttgtaat gtcgcacttt 3301 ctcagcgatc actgccgccg tttgcaggag ctttggctca ccgatcgcat ggttctgatg 3361 ttctatccca gttcctatcc gcccgagcag atctactgca tttgtgtgct ggccctgttg 3421 gtcaggatgc cagccaaaaa ggccccgata ccacggacca taatcaacga tcagttgccc 3481 tcacaatatc tgtattttgc cgaacatgct ccgtgttttc tgatgttcgc ccaggtcgaa 3541 aggtcaacga ttgaggaaaa accatctgca gatcccaaac ccaataatcg tgactctcta 3601 tacatctttt ggctaaccag cgccgatttt catctgaaaa atgtcgtctg tcgcgtctac 3661 atttattgcc aggatcgcag tctcaaggga aattcgctgt tgaatttcgt tagcatgtcg 3721 gagtttaaga gcgttgccca tctggtcaaa aatcagccgg gcagctatct ggccatcgat 3781 tataaaacta tggcatcgct gaccaaggac ttcaaggaac tgctctttat cgaggtgcgc 3841 tacctcaata aaatggtcga gcatgaagat tccaatgacg agaccttcga tgtttagaaa 3901 tttgaacctc tgggcagaaa actttgaggg atatcaacag cttaattgga acttaactgg 3961 aactatatat atatttttat atgccaactt tggaaaatta ttgtgtcact tgaaataaac 4021 acaggttgtg ggtaataaat tg