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LOCUS XM_044394225 9192 bp mRNA linear INV 09-DEC-2024 calcium-activated potassium channel (SK), transcript variant X3, mRNA. ACCESSION XM_044394225 VERSION XM_044394225.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044394225.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9192 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..9192 /gene="SK" /note="small conductance calcium-activated potassium channel; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108058158" CDS 714..3797 /gene="SK" /codon_start=1 /product="small conductance calcium-activated potassium channel protein isoform X3" /protein_id="XP_044250160.1" /db_xref="GeneID:108058158" /translation="MSIQKLNDTTNSGYVSSEETDSLLVSSSNPSKGGGRTALLRQVK SSSTNGPTTGASTSSSGSVTGSGTGTGSGSGGGSGSVSASGSNSTAGGGTGASKPTLM RQDRTSTYLTSPQQSQHVRMGSEESMRGGGGGGGGGATAHDEDVEQGLQVRSSIVPDI EVHEEDQERGSTTTTTTITTNNQQPTISIMNLSLKPGESHSHSHSSSPGSHPNLGTSS YQNLASSIPPSVPSRCRACRNCSRRASTTPTTLIDRSASRDSVKSAFQQGNLSGSMAI CISNSALPQQQQQQQYHLQQQQHYQLQQQHLQHQQHLQQQQQQQVPPVLITSSPTNGS RIIRQSSQPESSSTAICCGPHSACVGHAHSHSHTVPNVSLKQLRESSGDGIAGIAADS LRINGGMRPFKQGVLLMPRTLSDSRKLRLRRAFTEATNETLQCSKMLRKPASTLSIPG SMKTPSIANREQISSGCNEEAAEALVGIHSDYPRYEMYMEERALTGGNTSRKPSTNSA KHKPNVGYRLGKRKALFEKRKRISDYALVMGMFGIIVMVIENELSSAGVYTKASFYST ALKTLISVSTVILLGLIVAYHALEVQLFMIDNCADDWRIAMTWQRISQIGLELFICAI HPIPGEYYFQWTTKLANKNKTIGTEMVPYDVALSLPMFLRLYLICRVMLLHSKLFTDA SSRSIGALNRINFNTRFVLKTLMTICPGTVLLVFMVSLWIIASWTLRQCERFHDEEHA NLLNSMWLTAITFLCVGYGDIVPNTYCGRGITLTCGMVGAGCTALLVAVVSRKLELTR AEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRVNPGRVRTHQRKFLLAI YALRKVKMDQRKLMDNANTITDMAKTQNTVYEIISDMSSRQDAIEERLTNLEDKMQSI QEHMESLPDLLSRCLTQHQERIEQRRNFLHPDTAAVAPIQAPTPQSMFNAAPMLFPHS RSVPSSNNAAATYHWPTSPILPPISSRTPHLVPDTHMPSNGSAVNSYASSNKYGS" misc_feature 2265..2597 /gene="SK" /note="Calcium-activated SK potassium channel; Region: SK_channel; pfam03530" /db_xref="CDD:460958" misc_feature 2859..3098 /gene="SK" /note="Ion channel; Region: Ion_trans_2; pfam07885" /db_xref="CDD:462301" misc_feature 3138..3362 /gene="SK" /note="Calmodulin binding domain; Region: CaMBD; pfam02888" /db_xref="CDD:460739" polyA_site 9192 /gene="SK" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caaacaacac taacggaaac atcaacgtga aagcgagacg gacgccctcc gtcccgttat 61 atgctgtgtc tgtctgtctg tctgtgtgtt gagagttcta cgtcgcgcac tccaaaaaaa 121 aaaaaaacca aaaaaaaaaa tcaaaaactt taacactcgc atacacactg gcacacacaa 181 acatacacac acatacatta atatatatag ttaaaaaaaa attatataca aaaagaaaag 241 aagtgcaaga aaaataagcg cccactgcgg ccaatggaaa tgccaaagaa aatgcagcag 301 caacaaattc gacaacaaac gcaaattcta cagcaacaac aacaacaaca agcacagcca 361 cagcagcaac aactgcagtt ccccaataca taggtccacc gattttccgt ctttgtcgcg 421 cgcgttcaca cacacaaaca cagtcacaca ctgggacaca tgcatgtgca taaatggcaa 481 tatggacgaa gagcagcagc agcatttgcc ttgtattggt ataccagcac agtgacacgc 541 gcgtgccaaa tattgccgat tttatcacac gaacaacaac aacaacaaca actgcaacaa 601 cagcaacacc agcgggacca gctattaact aaaggagcca ttacaacaac aaagaccata 661 gcaacaacaa caagaacaac gaacattgct ggaaggcgtc gcaaaatatc aaaatgtcaa 721 ttcagaagct aaacgacacc accaactcgg gctacgtgag ttccgaggag acggactcgc 781 tgctggtgag cagctcgaat ccctccaagg ggggcggccg gacggctctg ctgcgccagg 841 tgaagagtag ctccacgaat ggcccgacga cgggggcatc cacctcgtcg tcgggctcgg 901 tgacgggatc gggaacagga actggttctg gttccggtgg aggatcagga tctgtatcgg 961 catcgggctc gaattcgaca gccggcggag gaactggggc ttccaagcca acattaatgc 1021 gccaggatcg cacttccaca tacctaacga gtccccagca atcgcagcat gtgcgaatgg 1081 gctccgagga gagtatgaga ggtggaggag gaggaggcgg aggaggagcc accgcccacg 1141 acgaggatgt ggagcaggga ctgcaggtcc gcagcagcat agtgcctgac attgaagtac 1201 acgaagagga ccaagaaagg ggatcgacaa cgaccacgac cacgatcacg accaataacc 1261 aacaaccgac catatcaatt atgaatttaa gcctgaagcc cggcgagagc catagccata 1321 gccacagctc cagcccgggc agtcatccca acttgggcac ctcatcatat cagaacctgg 1381 cctcgagcat accgcccagt gtgcccagtc gctgccgggc ctgtcgcaat tgcagccgac 1441 gtgcttccac cacgcccacc accctcatcg atcgctccgc ctcccgcgat agtgtgaaaa 1501 gtgccttcca gcagggcaat ctcagtggct cgatggccat ttgtatatcg aactccgcgc 1561 tgccgcaaca gcagcagcag cagcaatatc acctgcaaca gcagcaacac tatcaattgc 1621 agcagcaaca cctgcagcat cagcaacatc tgcagcagca gcagcagcaa caggtgccgc 1681 ccgttttgat cacctcatcg ccaacgaacg gatcccggat tatacggcag agctcacagc 1741 cggaatcgag cagcacggcg atctgctgcg gaccccattc cgcctgcgtc ggccacgccc 1801 actcgcactc gcacacggtg cccaatgtct cgctgaagca actgcgcgaa agttccggcg 1861 atggaatcgc gggcattgca gccgactccc tgcggatcaa tgggggcatg cggcccttca 1921 agcagggcgt tcttctaatg cctcgcacat tgtctgatag ccgaaagttg cgccttcgca 1981 gagccttcac cgaggccact aacgaaacgc tccaatgctc caaaatgctc cgcaaaccgg 2041 cgtcgacact ctcaattcct ggctcgatga aaacaccttc cattgcgaac cgggaacaga 2101 tctcatctgg atgcaacgaa gaagcggccg aggcactagt gggtatccac tcagactacc 2161 ctaggtatga aatgtatatg gaagaacgtg ctcttactgg cggcaatacg tccaggaagc 2221 catcaacaaa ctcggccaaa cacaaaccca atgtgggcta tcgcctgggc aagaggaaag 2281 ccctcttcga gaagcgcaaa cggatcagcg attacgccct ggtcatgggc atgttcggga 2341 tcatcgtgat ggtaatcgaa aacgagctga gcagtgccgg tgtctacaca aaggcatcgt 2401 tctactcgac agcgttaaaa accttaatat ctgtttcgac tgtgattctt ttaggactta 2461 tagtagctta ccatgctttg gaagtgcagt tattcatgat agataactgc gccgacgatt 2521 ggaggatcgc aatgacatgg caacgaatta gtcaaatagg gttagaactt tttatatgcg 2581 ctatacatcc aattcctggc gaatactatt tccagtggac gacgaaattg gccaataaga 2641 ataaaacaat tggcaccgaa atggtgccat atgacgtagc tttatcatta cctatgttcc 2701 ttcgattata tttaatctgc cgcgtaatgc tgctgcattc aaagctattc acagacgcat 2761 catcacggag cattggcgct ctcaatagga ttaattttaa cacaagattc gttttaaaaa 2821 ctctaatgac aatatgcccg ggaacggttc tattggtctt catggtctcg ctgtggatca 2881 tcgcatcctg gacgctgcgt cagtgcgaaa ggttccacga tgaggagcac gcgaatttgc 2941 taaactccat gtggctaacg gccatcacat ttctgtgtgt cggctacggc gacattgtgc 3001 caaacacgta ctgtggacgc ggtatcaccc tcacctgcgg catggtgggc gccggctgta 3061 cggctctact agtggccgta gtttcccgga aactggagct gacccgtgcc gagaagcatg 3121 tgcacaactt catgatggac acgcagttga ccaaacggct gaaaaatgct gcggcgaatg 3181 ttctgcgtga aacttggctc atttacaaac atacaagact agtaaaacgg gttaatcccg 3241 gccgtgtaag aacccaccaa agaaagttcc ttctagctat atatgcgttg cgaaaagtta 3301 aaatggatca gcgcaaacta atggataatg caaacacaat aactgacatg gccaagacac 3361 aaaacacggt ctacgagata atatcggaca tgtctagccg tcaggatgcc atcgaggagc 3421 gcctaaccaa cctggaggac aaaatgcaga gcatacaaga gcacatggaa agccttccag 3481 acctattgtc tcgatgtctg acccagcacc aggagcggat cgagcagcgg cggaactttt 3541 tacatcctga cacagctgca gtggccccca ttcaggcgcc aacgccccaa tcgatgttca 3601 atgcggcgcc catgctgttc ccccattcta gaagtgttcc ctcatccaat aacgccgctg 3661 ctacttacca ttggccaaca agccctattt tgccacctat atctagtaga acaccacatt 3721 tagtgcctga tactcacatg ccatcaaatg gatctgcagt taatagctac gcatcttcca 3781 acaaatacgg cagctgaata tcagaaagag agcgctccaa ctccgtgatt aacatcgaga 3841 tgctaacaat aaggccggat cgatgctggc caacatcctc atcaacatca acatcaaacg 3901 caccccagaa atcagcatta ccatcaacat caacatcaat gtctacgtca aaggcaaagt 3961 ctaaacccga attcgaaatg gccgagacag cgctcaggca acgtgtgcta tcgccgtcgt 4021 tatcgttatt gaaatcatcg tcacaagacc gcaatttgca tcaaataagt gggcggcaaa 4081 tggaaatgga aatggcaatg gaaagagaga tagtaccaat atcaatacca ataccagtga 4141 tacccgaaga tgccgaatcg aatacgaata gcaacagttc gcccgatcag caaaatgtgc 4201 agataagtac agtaccgcca tcgagttcaa cgcctgcttt cggaactagc ggtgcaacta 4261 gcgatggcat tgtcaaatcg ataacgatga acgaaccgat gacgacggag agcggcaaac 4321 cgattgcctc gaataagttt actaggaaaa gagaacgtgt atgcaataat agtagttaat 4381 agtgctaggc tatagtgata gtaataatag aggtaatagt aatattagta attctacaag 4441 tcgaatttcg aactcggcct tttgtaaata agcctcttcg agatgagaaa aaaagtcaaa 4501 tgttagcata tacatataat atacataaaa ccacccacac acacacactt cctatatatc 4561 tgtataactg tatggatgta tagcactccc cgaaaacgga aaaagaaaac cccttaaaaa 4621 tatcccaaaa caagaaaacc aaaaaacaat aacagaaaac caaacagaat atatgtatac 4681 atatatatac aattgtgtaa attttttttt ctaagtttta ggctaattgt atttgtaata 4741 tttcaccttg ggccaaggca gcctgtactt gcatactaaa attcatatac cataacatag 4801 catagagtgt gtgtgcatgt gtgaatgcga gtgtacaggg cgagaatgga gagtagaagg 4861 taaggtcata ggacatacaa acatatatag atcgtaggac accagcatgt acgagtagaa 4921 tcgaagtata taaacgaatt acgctcagca aggcagaaat agcaatagta aacctggaaa 4981 atctggcacc gtcagtatat cccttgtaga accgcaatcc taactcaaat gggccaacga 5041 gatcccctgc tgcccgttgc actttccttt ccgttgcata tccaacaacc aaccagcaat 5101 acatccacaa acatggcaaa ttctagtgtc cgtctgtctc aaatttgtgt gtaaatatat 5161 atgcatatat agcagtatat atatatgtat ccgaaggatg tgtgtctgac ctgactgtgt 5221 gtaacccatg cgacccatac aaaccaccac ccccaacaat tatatgaaaa acgaagaaga 5281 aaaaacaaaa accccaaacc cagaacaatg aaaaactatc taactgtaaa atgtatgtta 5341 cgagatttag aaaaaacagc gaaaccagaa aaccaaatac taagagatat aaactaaagc 5401 cgaataaaag aaaaactgtg gaaaaaacgc aaaaaccgag gataaagaaa aacttacaca 5461 caaaaatgag agttcttact taacatctac tagctctggc tttaactaaa cttacgaaac 5521 atgtttaaag gaaacaagtt tgttgttgtc ttctttttct acgcatatat tacaatatat 5581 atagtatata tacatatata ttttcgttgt tgttgttttt ggcctattct tttctaccaa 5641 gaattatgaa ctcaattaag aacctgaata gctttcgaag gaaattgaag atgaagacga 5701 tgatgatgat gatgatataa tgatatagta gcgtagacaa aaccaagaaa caaatgatat 5761 gaaatcgaaa aacgaactat ttagtatagt ctacatacta aagtgaacaa ttttaattgc 5821 aattttgtaa catattaaaa gtaattcgca ttaatttaca aaaactagct ggtaaatgtg 5881 taacaacgga acaaactaca agctccagat ggaaaataat agaaccgaaa tggggagaag 5941 cgaattgaaa ttgaattgaa attgaagtgg aggtggaact ggaaatggaa atggaaatga 6001 gtagagcaga ttagtgtaga cataatagca gaagtggccg agctacgtaa agattttcta 6061 aagattctaa gaggaacatt atatatacta tatacttact ataaagtatt aactgagagc 6121 atcgaagtta tttaaaacca aatgaaaaac gaatgcaaaa agaaaaagca agcaattagg 6181 taatatgcaa ccttctaacg ctttgttagg atcccatccc aaatggaagg caaaagagat 6241 atacaactga attccccgaa tagtgccccc acctccccag aatctcccgt tcccatcacc 6301 ccaaccaaaa atcccccaaa gtcagcaaga cagactctgc atattattat acagaaccag 6361 ggccagaaag gatcaaaata tctgtaaact atagattata tagccgtagg attcagtcca 6421 cttaagccaa ctaataaaag tatagaagtt ttgccacact gatttaccac atctccaaaa 6481 cccctggctt cagtttgttt ctatgaaaat taaaacccca caaccataaa gtttcccaat 6541 tgtctgatag atcttaactt atatacatac aatgaaaatc ccagaccagc aaaggagtca 6601 aaggagaaca aacaacaaac aagaaacaaa caaaccaact aaatgaaccc ttaaacaaat 6661 gtgtgtatac ctatttataa tattgaatat ttaaattgaa aagaacgttc aagactgctg 6721 tcaaaatagc tttatcacaa taaataacaa agatctacac aagacgacac acaccaaaca 6781 gaacagaaca gaacagatca gaacaacaat actaaactga tcgataagta tcgtttatcg 6841 aatcggaaca gacacctaaa gatacacaca acacacagat tctgatacga gatatggaat 6901 gcgcccagct ttaacgttat gtattcgtgc atatttgggt ttcaactcta caacaactta 6961 aaacgaatac gcaaaagaat actgaacaaa gatcgatata cgattaacga ttaacaatta 7021 acgatatacg aatcaaatca aatcgaattg aattgaataa ttggtacaag atcaaattcc 7081 cgtttgaact ggtttcctaa gccccacaaa atacctttaa acacgagata aaaaccaaaa 7141 actttgatat gagggaccga atttccaaag acaggtcttt attatacaaa aaaccgaaca 7201 acctaaaacc aaaagcaaaa gcaaaccaac taacgaagaa ttcctacaaa aaaaaacaaa 7261 acccataaca gtaacaattt ataataccga agatttttag ccgcttttga gctggattat 7321 gaaaagaaaa aggaatagaa aaaggaaaag agaaaaacac aaataaggat cgtattgcac 7381 aatgtccttg gttgacttcc gtaacatcat atagacacag gtccgagtcc cacgtccagt 7441 tttagtgtgt attgtgtatt tccgttcacc ttaatcagaa ttgaatcgaa aaatatatca 7501 actttctttt cttcagcgaa tcatagagct caaggggtac ttcgagaatc acgcttcaac 7561 cgaaactctt ctagccaaac caggtccaat agaacttaca tacatatagc ccagccaatg 7621 ccaatgctac aaaccaaaaa aaaaaatgga ttcgagtttt cgaaaacgta tcgaaccgga 7681 ttatgacgaa aagggcagcc attttggtga atttacacgc taggaactag aaaagggtcc 7741 tcccaaacac caaatacccc ccaaactcca taacccctcc ccctccccca ccccctgtgc 7801 gcccaactag atcgaggtat gcaaaatata taaggttaca tatacaatat ctagatatac 7861 aacacacata tactcgtata tacatgtaca gacggtctat gaggtatata ccaaacccaa 7921 gaaagcccaa aaaccaaaaa ccccacacta ataagatcat atttgacttt atatgtatta 7981 tagtaatgta ttcagtagct aaatcgaaag ccgaagcaaa gaccaattta ttaacaacaa 8041 actaataaga taacccccaa aatggaaaac aattattatg ttaaattaaa ccattaaaat 8101 ctaagaggga ggcaaaacaa tttttttatt gaaaaaaaaa aacaagaaaa acaaaacaaa 8161 agaaaacaaa gtaaactaga atgcattgca tgaattaaat aaagagaaaa aaactaatag 8221 aaacccaaaa cttaactaac gaaggtcaac taaaactaaa cttaaactta acctactcta 8281 atgctaaaat tgaagtaaaa ttaacttaaa accactaaaa ggaaaaaaga tttaatttct 8341 aaaagaaata aagtaagaaa ctaaaacaaa gtaaacagaa aaaaattcag tggctaatga 8401 aatagtttat tttgaattta ctgtattgta tatttaaatt taaacaaaaa agggaaaccc 8461 caaacaaaat atattgttat atcttatcga ggaaccgtgt tttgcaaaag ctttaatatt 8521 tagggtgcct acatttgcta aattagtatt ttacgattta aaacttaaag aaaaaacaaa 8581 acaaatacta aaaccaacac ctacatacac gaaatagtat aaagcttgat tgaaaaacga 8641 acccaaaaag ttaggaacgt gaatttccaa aacgattaca ctgaacaaaa agaaaaccga 8701 aaccaaaaca aattaagaac aactaacagc taaagcaaat attgtatttg tatttgagat 8761 atgaatttta agaatgttta ttagacttac ggttggttat tttgtataca tatatatatt 8821 atatgtatta tgtatgtagt ataaactgat ctgatctgac gacgattgta attgtttttt 8881 tttttgctca ttaagcattt acctcataag aattcccact atttatagca aatttaccat 8941 attacataaa atcaattgct gtactgttat aatgtacaac cccaaggaaa cgatatgtag 9001 gacgaggaag aaccataaca agagagagaa atcgataaaa gtcgaggggc aagaggaaaa 9061 ctcataaaac tgtaaattat taattaatga agaaaaaacc aaagagaata attgaaattt 9121 taacaataat aaagggcttt gtatgaaaga aaaacaaaca aaaactgaat aaaaatgaaa 9181 taaaagtaac aa