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LOCUS XM_044393956 4258 bp mRNA linear INV 09-DEC-2024 (Hmt4-20), transcript variant X3, mRNA. ACCESSION XM_044393956 VERSION XM_044393956.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044393956.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4258 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4258 /gene="Hmt4-20" /note="Histone methyltransferase 4-20; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108055810" CDS 725..3253 /gene="Hmt4-20" /codon_start=1 /product="histone-lysine N-methyltransferase Suv4-20 isoform X2" /protein_id="XP_044249891.1" /db_xref="GeneID:108055810" /translation="MVVGSNHTRRGETGSRFTNSSSSSGSNGGGSTASASSTTSATSS LATNSNSTSTATAAAALLSSMSHKGHGPPPSAPPSAHHQANQHHHDPHTPHYQQANQH PSSHHHQSNGSGGGGGASSGSVVSGLNGCNGSAVSRLSQSTGMSPRELSENDDLATSL ILDPHLGFQTHKMNIRFRPLKVDTQQLKAIVDDFIHTQNYDVAIQRIYDGPWIPRHLK NKNKIATKRLHDHIVRYLRVFDKDSGFAIEACYRYSLEEQRGAKISSTKRWSKNDKIE CLVGCIAELTEAEEAALLHSGKNDFSVMYSCRKNCAQLWLGPAAYINHDCRANCKFLA TGRDTACVKVLRDIEVGEEITCFYGEDFFGDSNRYCECETCERRGTGAFAGKDDGLML GLSMGLGLTTNGPGNNAGGYRLRETDNRINRIKSRANSTNSTSNSNSNTNDSTGTSES SSTNGLAVVSGGGAAAGGASVPAVPSQPSAGGSKELTVTAPVSLLEKKLPNVVVSPLT MKELRQKGMTKYDAEMIMANAAYQQQHHHQHHFHHHHHHHHHHHNHGQHASTGAEATA AVQQLAAMQKPGGAGGSVAGTGGGTAVAGGAGSEVNGNRSSSLRKSMRVNSTSSSIST ASTDEAVPVVVATSIPLPTKAPVVLVPRCKPAQMAIAAMQQRQQRQLRRSERQKEKLT DGESSDTSSDQQQKREQNQHQLAEEEQAHPVEKQEQQQEKRVTRNSAGRGGGGALVAR LATAHNNNIATTTTTNSSSSSKATTTITNCGNLRLRSRKRSEKCDGSQRRNSSSSSNA TSKTNSSSGSSNIFSGNSNTSSSSSNLIVKKLRIELNRIQIMYS" misc_feature 1448..1873 /gene="Hmt4-20" /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily; Region: SET; cl40432" /db_xref="CDD:394802" misc_feature order(1502..1507,1679..1696,1718..1726,1790..1801) /gene="Hmt4-20" /note="active site" /db_xref="CDD:380914" misc_feature order(1502..1507,1682..1696,1796..1798) /gene="Hmt4-20" /note="SAM binding site [polypeptide binding]; other site" /db_xref="CDD:380914" ORIGIN 1 atcgatcgct cgacgttgtg ccacctctaa tgaatcggga ccaaatcgcg gaaaaaaaag 61 cagccgcatt ttgtaaatta agtccgaatt agaaccgatc cgacacagag gtcttttaca 121 agagaatcgc aaaatcgcaa cggaagcaga ggcaaagtgc agaaaagaaa acaagcggag 181 aagtgaagaa aaaggcatac atacagacgc acgtacacac gtctcgcctc gctcgtccgc 241 aggaatatat gtatccgtct gggtgtgcgt gtgttggtgt gcgctgcagc agcagcagct 301 tctaggcgtg aaagagaggg ggctagattc ccattccctt tccgactcgc gacttttgga 361 gcgtctcgcg agcgagagag agcgaaagag agagaggcag agccagagag cgagagccat 421 ggacggcgtt tggatgtttt tggggaacaa aggcgtcaag agctaaaatg atttggcaca 481 gcagcggcga tatattttgg atacgcagcc aaagccaaat ccaagccatc caaaacgata 541 accaattcca actccaatcg ctctgtgtat gtgtgtgtct cgacgaaaag ccgtggaaaa 601 agacgcacgc acacacacgc acacagaggc atcagcagca gcagcagaca aagcatcgtt 661 ttgcgggtgc gagcgagagg caatagcgcc ttagtgaata attcttttaa gactgtcctg 721 cagaatggtc gtcggctcga atcacacgcg gcgcggtgaa actggcagca gatttacaaa 781 cagcagcagc tccagtggct caaacggcgg tggttccacc gcttcggcca gcagcaccac 841 cagcgcaacg tcttcactag ccaccaattc caattccacg tcgacggcga ctgcggctgc 901 ggctctgttg tcgtccatgt cccacaaggg tcatggccca ccgccatccg ccccgccatc 961 tgcgcaccac caggcgaatc agcaccacca tgatcctcat accccccact atcagcaggc 1021 gaatcagcat cccagcagcc accaccatca gtcgaatggc agtggaggag gaggaggagc 1081 ctcatcagga tcggtggtca gtggactcaa tggctgcaac ggcagcgccg tcagccgcct 1141 ctcgcaatcc actgggatgt cgccgcgtga actctccgag aacgatgacc tggccacatc 1201 gctgatcctc gatccgcatt tgggtttcca gacccacaag atgaacatac gctttcgccc 1261 cttgaaggtg gacacgcagc agctgaaggc cattgtggat gactttattc acacgcaaaa 1321 ctacgatgtg gccattcagc ggatctacga tggtccctgg ataccgcgtc atctcaagaa 1381 caagaacaag atagccacca agcggctgca tgatcatatt gtccgctacc tgcgcgtttt 1441 cgacaaggac agtggctttg cgatcgaggc ctgctacaga tattcgctcg aggagcagcg 1501 cggcgccaag ataagctcga cgaagcgctg gtcgaagaac gacaagatcg agtgcctggt 1561 gggctgcata gctgagctga cggaggccga ggaggcggcc cttttgcatt cgggcaagaa 1621 tgacttttcc gtgatgtata gttgccgcaa aaattgcgcc caattgtggc tgggaccggc 1681 tgcctacatt aatcacgatt gtcgcgccaa ctgcaagttt ctggccaccg gcagggatac 1741 ggcatgcgtg aaagtcttgc gcgacatcga ggtgggcgag gagataacct gtttctatgg 1801 cgaggacttt ttcggcgact cgaatcgcta ttgcgagtgc gagacatgcg aacgccgcgg 1861 cacaggcgcc tttgcgggaa aggatgatgg tctaatgttg ggtcttagca tgggattagg 1921 cctaaccacc aatggaccgg gcaacaatgc cggtggctat cggctgcgcg agacggacaa 1981 tcggataaat cgcatcaaga gccgggccaa ttcgacgaac agcacgtcga acagtaatag 2041 caatacaaac gattccactg gcaccagcga gagtagcagc acaaatggat tggcggtggt 2101 ttctggagga ggagcagctg caggaggagc ttctgtgcct gcagtgccat cacagccatc 2161 agctggcgga agcaaggagc tcactgtaac tgcacccgtt tcgctgctcg aaaagaaact 2221 accgaatgtt gtcgtctccc cgctgaccat gaaggagctg cgccaaaagg gcatgaccaa 2281 gtacgatgcc gagatgataa tggccaatgc agcctaccag cagcagcacc atcatcagca 2341 tcatttccat caccaccatc atcatcatca ccatcaccac aatcatggcc agcatgcgag 2401 tacaggagcc gaggccacag cggctgttca gcaattggca gccatgcaaa agccaggagg 2461 agcaggagga tcagtagcag gaacaggagg aggaacagca gtggccggcg gagcgggctc 2521 cgaggttaat ggcaatcgct ccagcagtct gcgcaaatcg atgcgtgtga atagcaccag 2581 cagcagcatc tccacagcct ccacggatga ggcggtgccc gtggtggtgg ccactagtat 2641 tccgctgccc accaaggcgc ctgttgtcct ggtgccacgt tgcaagcccg cccagatggc 2701 cattgccgcc atgcaacagc gacagcagcg ccagctgaga cgcagtgaac gccagaagga 2761 gaagctcacg gatggcgaga gcagcgacac cagcagcgat cagcagcaga agagggagca 2821 gaatcagcat cagttggcgg aggaggagca ggcacatccg gtggagaagc aggagcagca 2881 gcaggagaag cgtgtgacgc gaaatagtgc gggaagagga ggaggaggag cattggtagc 2941 cagattagcc actgcccata acaataacat tgcaaccaca acaacaacaa acagcagcag 3001 cagcagcaaa gcaaccacaa cgattacaaa ttgtggaaat ttaaggctta ggagtaggaa 3061 aaggtcggaa aagtgcgacg gcagccagag gaggaacagc agcagcagca gcaacgccac 3121 cagcaaaacg aacagcagca gcggcagcag caacatcttc agcggcaaca gcaacaccag 3181 cagcagcagc agcaatttga tagttaaaaa gctaagaata gagttaaatc gcatacaaat 3241 catgtacagt tgagaaataa cagccagcag gatcaggatc aggatgatca gtgagcccag 3301 gagtccccca aaccagccat tcattattca aaacaataaa caaaatgaaa tgtggaagga 3361 tttaacaatg cacacagaca caacaacgca attagcagcg gttttagacg ccttatataa 3421 agaaaaaaaa acaaccttat atttacaaaa ataaatatat aaaggatact ttagaaaaat 3481 cccacaaaag ccaacaacaa aacaatagtg cagcagcagc agcaacaaca agaacagcaa 3541 tatataaaca actcaattaa gtaattaaat atatatatat agtatatata tatatacaac 3601 aaatttaata ttaataacaa atcgaaaata gtagaagaaa aggggataaa gcgaaactta 3661 gcaaatcata aattttcacc taacagaata caatgtatat aaacaaaaac aaagcggaga 3721 attaaattat aaagccagcg aaagcgaaaa atgattaaac cgaacataca aataaaactg 3781 ctaaaaacaa tttgaaaaca aaaatggtga ttgatccaag tactctgctt tacaatacat 3841 atattatatg gttttcgatc caacccaatc caatcagctc gcatcattct gttatcatcc 3901 ccaaaaacat ttcatccaaa atttcgttga agtttagttt tggaaaactt aaagctaaat 3961 caacctcaca cacactcaca cgaaatgtac ttggcccaca cacacacaca caaacaccga 4021 tttgattata ttttttatta cctatagtaa taaatataaa tatatgattt tttacgatat 4081 gattattttt tgtttaccta taagtttagt tgctagcata tataattata cattaatcat 4141 attcaatata tattatatat actttattca tatgtgtaac tactgtgtat tattttgtaa 4201 gccaccaaca acaatttcgg cagccacggc cgcaaaacat tcataataaa ctaaaaaa