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LOCUS XM_044393799 4154 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_044393799 VERSION XM_044393799.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044393799.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4154 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4154 /gene="mthl1" /note="methuselah-like 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108059133" CDS 498..2420 /gene="mthl1" /codon_start=1 /product="probable G-protein coupled receptor Mth-like 1" /protein_id="XP_044249734.1" /db_xref="GeneID:108059133" /translation="MEGFGIILLLLIAESSSWALEESTANIANPPPRPSPPPTVKLNK CCHSGEFLNETSGACLAGSETLWLPMVYLVQQQRFYEPHGAAPRFLKFLPNTRPKCGQ DRRTELFRSRGGNVMLFPNGTLYVRERGLLVQPPDYCVDWEVALVCLESQPQDADALK APAANHSEHGPANLRLSKCCGRWGSYNTQLQNCDLQPQREKLLRLAPQLPAGSYLTSY GLPVCPRSGGYAIAGDWQDARLDRTTAGLQLPHKNLSADQYCLEHTEREGEVKIIACQ HLFSAEEMAAPGEAVEDLGGQNLQKAVLTGGILVSIVFLTATLVAGFLLPTAHHALHW RCQICYISCLLLGKILLAIEELSSSLQPGSAACHTLAILMQFFFLAAFFWLNTMCFNI WWTFRDFRPSSLERNQEALRRYLYSLYAWGGPLLITFVAACVDQLPETTLLRPGFGQL YCWFDNRNLSIFAYFYGPIGLLLCANIALFVSTTHQLTCGLWKREDVKSSSEKSALGR VCLKLVVVMGVTWIADILSWAVGGPHGVWFFTDLINALQGVFIFIVVGCQPQVWTACR RIFCPRLRHDITNTTNGVQHSSSSQGLPSLAGGTEITQNTTMPSSPAADSGLEDDMPE KGPVPPVPGVKMETVC" misc_feature 1389..2207 /gene="mthl1" /note="Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G protein-coupled receptors; Region: 7tmB3_Methuselah-like; cd15039" /db_xref="CDD:410632" misc_feature 1392..1469 /gene="mthl1" /note="TM helix 1 [structural motif]; Region: TM helix 1" /db_xref="CDD:410632" misc_feature order(1407..1409,1419..1421,1548..1550,1557..1562, 1569..1571,1599..1601,1620..1622,1878..1883,1887..1889, 1893..1895,2058..2060,2067..2069,2106..2108,2118..2120) /gene="mthl1" /note="putative polypeptide ligand binding pocket [polypeptide binding]; other site" /db_xref="CDD:410632" misc_feature 1497..1565 /gene="mthl1" /note="TM helix 2 [structural motif]; Region: TM helix 2" /db_xref="CDD:410632" misc_feature 1599..1682 /gene="mthl1" /note="TM helix 3 [structural motif]; Region: TM helix 3" /db_xref="CDD:410632" misc_feature 1734..1796 /gene="mthl1" /note="TM helix 4 [structural motif]; Region: TM helix 4" /db_xref="CDD:410632" misc_feature 1866..1958 /gene="mthl1" /note="TM helix 5 [structural motif]; Region: TM helix 5" /db_xref="CDD:410632" misc_feature 2001..2084 /gene="mthl1" /note="TM helix 6 [structural motif]; Region: TM helix 6" /db_xref="CDD:410632" misc_feature 2097..2174 /gene="mthl1" /note="TM helix 7 [structural motif]; Region: TM helix 7" /db_xref="CDD:410632" polyA_site 4154 /gene="mthl1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ataaggtttt cccctcttac catcgaaagt atttccaaaa aaacgcgagg aaaggtggct 61 tgaaaacaga gcgcataata ttattttatt ttttttaacg ccgcgcacag tgcttacgac 121 tgaaaactga gacacgagag cacgaaacct cgctgtattg cctttaccgc gccgagagca 181 aaatgcaacg gtgatatgtg cataattcgc tgacaactct atttgattgg aggccaagaa 241 aaacaagaac gcgccgtgtg tttattcgga cgcctcgatt ttgtttgttt gtttgctcga 301 cttacgtgaa acggaggtga aatttcccat tttccatttg tttactggct ggccgaagga 361 gaggaaaagt gaaaagtgtt gatcgacgag gcggaacggc agaaaaatct gaatcggaat 421 ctcaatctga atctgaagat gtgtgtacat agcacataaa ttgcagattg aggccgcctg 481 aaaaaaacga gagaaagatg gaaggctttg ggatcatcct gctgctgcta atagccgagt 541 ccagttcctg ggccctcgag gaatccaccg ccaatatagc aaatccaccc ccacgacctt 601 cgccaccgcc caccgtgaag ctcaacaagt gctgccactc gggggagttc ctcaacgaga 661 cgagcggcgc ctgcctcgcg ggcagcgaga ccctatggct gcccatggtc tacctggtgc 721 agcagcagcg cttctacgag ccccacggcg ccgctccgcg cttcctcaag ttcctgccca 781 acacgaggcc aaagtgcggc caggatcggc ggacggagct cttccggagt cgcggcggca 841 acgtgatgct cttccccaac ggcacgctgt acgtaaggga acgcgggctc ctcgtccagc 901 cgccggacta ctgcgtcgac tgggaggtgg ccctggtctg tctggagagc cagccacagg 961 atgccgacgc cctgaaggct ccagctgcga accactcgga acatggcccc gccaatctcc 1021 gcctgagcaa gtgctgcggc cgctggggca gctacaacac gcagctgcag aactgcgacc 1081 tgcagccgca gcgcgagaag ctgctccgtc tggcgccgca gctcccagcg ggcagctacc 1141 tgaccagcta cggcctgccc gtctgcccgc gctccggtgg ctatgccatc gccggcgact 1201 ggcaggatgc ccggctggac aggacgaccg cggggctgca gctgccgcac aagaacctca 1261 gcgccgacca gtactgcctg gagcacacgg agcgcgaggg cgaggtgaag atcatagcct 1321 gccagcattt gtttagcgca gaggagatgg cagccccggg cgaggctgtc gaggatctgg 1381 gcggtcagaa cctgcagaag gccgtcctca ctggcggcat actcgtatcc attgtctttc 1441 taaccgccac tctggtggcc ggcttcctgc tgcccaccgc ccatcatgcg ctgcattggc 1501 ggtgccaaat ctgctacatc agctgcctgc tgctcggcaa gatactgctg gccatcgagg 1561 agctgagctc cagcctgcag cccggcagcg ccgcctgcca cacgctggcc atcctgatgc 1621 agttcttctt cctggccgcc ttcttctggc tgaacaccat gtgcttcaac atctggtgga 1681 cgttccggga cttccgtccc agctcgctgg agcgcaacca ggaggcgctg cgtcgctacc 1741 tctactccct gtacgcctgg ggcggcccgc tgctcatcac cttcgtggcc gcctgcgtgg 1801 accagctgcc ggagacgacg ctgctgcggc cgggattcgg ccagctgtac tgctggttcg 1861 acaaccgcaa cctgtccatc ttcgcctact tctacggtcc aattggcctg ctgctgtgcg 1921 ccaacatagc gctcttcgtg tccaccaccc accagctgac ctgcggcctg tggaagcgcg 1981 aggatgtcaa gagttcgtcg gagaagtccg ccttggggcg cgtctgcctg aagctggtgg 2041 tcgtgatggg cgtcacctgg attgcggaca tcctctcgtg ggcggtgggc ggaccccacg 2101 gcgtctggtt cttcaccgac ctcatcaacg ccctgcaagg cgtcttcatc ttcattgtgg 2161 tgggctgcca gccgcaggtg tggaccgcct gccgccggat cttctgcccg cgattgcgac 2221 acgacatcac caacaccacc aacggcgtcc agcactcgag cagctcgcag ggattgccct 2281 cgctggccgg cggcacggag atcacccaga acaccaccat gcccagcagt ccagcggcgg 2341 acagcggact ggaggatgac atgccggaga agggcccagt tccccccgtt cccggcgtca 2401 aaatggagac tgtttgctaa acacaactga gacgacgagc gacaatgcga aagtcaggcc 2461 cggatacaaa agtccagacc tcgaacgagc gaaataatgg caatgggcag ctcagcacag 2521 aggcagcaag cagaagaaaa aaacgaccaa accaaaacga aaaaagctgc taaagctgga 2581 gtttcgagac gagaggcggc ggcacacact tgcgcaatcg cagcgacgac caagctgacc 2641 agctaattgt gcgagctgtg tgtgtgtgtg taagcgcctt gcgcgtgatt ttgaaatcgg 2701 ccaacaaccg ctgtggaaca aaaagtactc ggtgtgcgcc agtattcaac ttcaatttga 2761 gccagcacaa aagaaacgta ttattttatt catcgtcata atcgcgagag gcagaagaag 2821 aggcagtaaa agcagaataa cggtagagca gttcgggtca cattaacaca ttctaactgg 2881 ccagtgttgc gaaatgcctg gaatgtgcag ccggacagga attcacaata gacaaaacaa 2941 aacaagctat tgttgctctt tcttccaagc gcttccaagc aacaatatat gtatgtatgt 3001 acacaaaaac aacagaagtg tgtgtgaggc aaccacaagg aatttgctgt tgaggcactt 3061 ttgttgttgt ttagctaaga tcgctgctct gctttttctg tttctgtttc tgactcaaat 3121 ctcaagtgtg agaaaaacgg tcgacacaca catgcacatt tcggatgttt aacatttaaa 3181 ttagctgatt ctggaattga attccccgat ttccattgac ttgacactga ttgcatccag 3241 tctttgtgtg tgtgtgagac tgtgtatttg acattttcat tgcctaatca cttttttact 3301 gactaaaact atttttatgc ttggcgcata atctttttcg gctgaaaatt ttttaaatgt 3361 tttttatggg cagagtaaac aaacaaaatt tatttactca aaggcataaa caaaatcgct 3421 gcgcacactc acacacacac tgatacgcgg aaacaatcaa attcatcatc aaaagttcat 3481 cgatacttat cgatcaaggt taaatggttg gaaaagaaag cgcgcttaat taaacaatga 3541 taaagcagta gacacacaca cattaacatt aaccgaaact cttgcaactt gtggcgccaa 3601 atttgaattg tattccccca acccaaacgt attttatgta ttttaggtct tgaaaacgca 3661 gaaactacaa tgcagtacaa ttattatttc tcattatttt tatttaatca attagttatt 3721 ttttttgcta attaatttat tgctcgagtt tgcaacaaca cacgttcaac gtgcgtcagc 3781 aacatttgta ttatgatgta gtagaacttc caaagtgttc aggccaaaac taattctcac 3841 cgtactaaag agcgaatgtg ctgattttgg taggagtcga ttgtttatat atatatattt 3901 actatttacc atttacttgt acataatcaa ggagaaaaat gccttctttt ctgtgtattt 3961 tatactttat ttcttgatcc taagcaacga atcgaatatg aaattatcga atgactgaga 4021 caaaggcagc gaatacttta caccaacatg catagattgt aattttgata ctaactattg 4081 actattgtat ataaacgtat tttgtacacc ctattggcta agcgattgat atatattata 4141 cacgtttcaa tgta