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LOCUS XM_044393602 2644 bp mRNA linear INV 09-DEC-2024 transcription subunit 25 (LOC108054349), transcript variant X2, mRNA. ACCESSION XM_044393602 VERSION XM_044393602.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044393602.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2644 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2644 /gene="LOC108054349" /note="mediator of RNA polymerase II transcription subunit 25; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054349" CDS 1099..2322 /gene="LOC108054349" /codon_start=1 /product="mediator of RNA polymerase II transcription subunit 25" /protein_id="XP_044249537.1" /db_xref="GeneID:108054349" /translation="MMETFLVLGLCFILYEALDFFQGCIHSNTPSPSDQIEAYRRELD EQRQQQQQEQFLAGLTPLLGAQFAAAAAAAAAAAAGSQSTLGSTTTPTASTASVISDS YDQESQSQSQSQSQSNQNQHHSLSTPGLFRPAALGYYDPEDPLHATNSLPRDYYYLQQ QQLKNKVSSRSLLSKFSSTNSDNRIHPEAGAGSGHHHSVLGQAAVITSQPLPGGEIPS SLFDQPGQAAVVVPPLQLQSPLFVELKRAIISQNQNKNHQRSEQKAEPEDSQCPQCEE EQQIQYLAENLDDLVESEEQQYSPGEEDEEEEDDDEEEDQDDREEQHSYVGGATSEPD ICAATRQQLLTRIHHIAIDDIATGQEHLHHHLSVAGETTLSANSHADFREIECERLRR KCVSVKRIYSISEKF" polyA_site 2644 /gene="LOC108054349" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgaaaccgag gatggatgga tggatgaagc cccttaagcc ggctaacaaa tgatcgcaat 61 gctcacctta tcgcgatttt ccagcgattt ccacctgctc aaaacaccaa agcttttcct 121 ttttcaccac atcaaaggag cgatgagaaa cgagagataa aaagacagag agagagagag 181 agtgagagta gagaagagaa gaaaagccga agaagagatt ttcagatgca aataccactc 241 ggtttctcct tcggctttgg tattggtgcc caaacacaca caggctcaca cagcggatgc 301 tgactgtttg caaaaagaaa atggaacaga aagcacaaca acacaatcac aatgttgccc 361 gccatctctc cgactttccc tgtgtaggtg tatctgagtg tgtgtgtgtg tccgagtgtg 421 ttatttgtgc gtgagtgtgc gtgctcgttt ctgctcggca aaagcggaaa aacgaacgct 481 cgtctgcagc acttatcttc acgggataaa tctcgctgct ggccgccgca gtctgttttc 541 aatacgggcg taaagcggtc gtcgagcacg gttgaaaagc aaagcaaata aaaaaccaaa 601 ccaaaaatac caagcagcca aaaacaacaa catcaaaaaa ataccgaaaa atataaaaat 661 aaaaaaccaa caaaatacaa taaaaacatt atgtcaaaat acaaaagaaa taaccacaca 721 aaatagggaa attaagaaaa acttctaaca agcggcaatt gcaaaataga agctaaagga 781 gttaaacgca ttgagccaag gataaagccc aacccctaga caaaaaaaag aaaaaaagaa 841 aagaaaaaaa actgatacaa aagagaagcc aaatgaggga aaatgaagtg ccaaagtgtt 901 gaaaataaag cgaaaaccaa gagacgaaat tgaaatcgag tagaaaaggt attttccgtt 961 tcgttttttc tcggtgacgc gcgtttcgtt tcgtttccgt ttcgcttcgt ttcgccacgt 1021 tccgttccgt ctcgtttccg ttccatttcc gttccgtttc cgctcggcaa acatttaaat 1081 ggctaccagc tgctacttat gatggagaca ttcctcgtcc tgggcctgtg tttcatcctg 1141 tacgaggcat tggatttctt tcagggctgc atccacagta ataccccatc gccgagcgac 1201 caaatcgagg cctatcgccg cgaactcgac gaacagcgcc agcagcagca gcaggagcag 1261 ttcctcgccg gattgacgcc tctgctgggc gctcaatttg cagccgccgc cgccgcagcc 1321 gcggccgctg ccgccggttc gcagtcgacg ctgggcagca cgaccacgcc caccgcctcc 1381 acggccagtg ttataagtga ttcgtacgat caggaatcgc aatcccaatc gcaatcccag 1441 tcgcaatcca atcagaatca acatcattct ttgagcactc ccggtctgtt tcgtcccgcc 1501 gccttgggat attacgatcc cgaggatccg ctgcatgcca ccaactcgct gccccgcgac 1561 tactactatc tgcagcagca gcagctgaag aataaagtga gctcgagatc gctactctcg 1621 aaattctcat cgaccaactc ggataatcgc attcatccgg aggcgggagc cggttcggga 1681 catcatcaca gtgtcctggg acaggcggct gtgataacca gtcaaccttt gcccggtggc 1741 gagataccct cgagtctctt cgatcagccg ggacaagcgg ctgtggtggt gccgccattg 1801 cagctgcaat cgccgctatt tgtggagcta aagagggcta ttataagcca gaatcagaat 1861 aaaaatcacc agagatccga gcagaaagcg gagcccgagg actcacagtg tccgcagtgc 1921 gaggaggagc agcagataca atatctggcc gagaatctag acgatcttgt agagtccgag 1981 gagcagcagt attcgccagg tgaagaggac gaggaggagg aggacgacga cgaggaggag 2041 gatcaggacg atcgggagga gcagcactcg tacgtgggag gagccaccag tgagccggat 2101 atttgtgcgg ccacgcgaca acagctgttg accaggatcc atcacatcgc catcgacgac 2161 atcgccaccg gacaggagca tctgcatcat cacctcagcg ttgcgggaga aacgacacta 2221 agcgccaatt cgcacgccga cttcagggaa atcgagtgcg agcgactgcg acgcaagtgc 2281 gttagcgtta agcgcatcta tagcatatcg gaaaagttct aattcagatc agatcaccac 2341 tcagaatcaa ttcgataact cagatatcat acctgtacag ccctactcac catattgcac 2401 ttcaatcgat ctcaaaatat atcgaaaata tcgaaaagaa aagccaatcg aaatcaaaaa 2461 tcgcctaaat caaaaagaaa aaaaaaacca atcaaaaatc aaagccaaat caaatcgaaa 2521 tcaaattttc aaattcagca atcaccaaca atcgaaccaa atgcaaccaa aatcacaaaa 2581 ttgtccaaag cgaaacaccc cacacaaggt tagcaaaaag taaaaaaaaa aaagaaaaac 2641 ataa