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LOCUS XM_044393543 6443 bp mRNA linear INV 09-DEC-2024 domain-containing protein xmas (xmas), mRNA. ACCESSION XM_044393543 VERSION XM_044393543.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044393543.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6443 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6443 /gene="xmas" /note="RRM_XMAS2 and SAC3_GANP domain-containing protein xmas; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108064217" CDS 110..5863 /gene="xmas" /codon_start=1 /product="protein xmas" /protein_id="XP_044249478.1" /db_xref="GeneID:108064217" /translation="MAEPRPGAYNYKTLLCTNIPELFLDKYVARSHFGRFGTLMNFVL RPRRMTCTVSYASEEEAELALLEGATFQGHQFGISYAESDAAPAQKTEEWVDPDVQAE LSVLQSGWRSDYAASKPSAAAAPPPNPPKNPSPAARELENVMRRPAHTSEERYRVLEA RDKLMRLNQAARKNQEGGGATQGHCPDMCPEKERVLREFQRQVAIYELQPGSDELICH ERALKQYSRSSADQETPLPHELRDERALHMTMSYLMHEIMDISEQQESGHHMGDWFHF VWDRTRSIRKEITQQELCSLGAVKLVEQCARFHIHCAARLVAADPSVFDSKINAENLT KCLQTLKYMYHDLRLKGVQCPREAEFRGYIVLLNLADANFLWDIGQLPGELQSCPEVR QAIQFHLALQDTNFVRFFQLLVDEETSYLSACILVAYFTRLRVLALHRLIQAYRAPRK DEVSSLPLSYITDMLSFVSEQEAADFVQHYGLEVNELGRVVLSRMHTVETDYKLPRQI ELVEMKRLQSVGEVICGEPLPPRHLYLDHRPHNSFNEHGVLKSVAWAAKDQLPGMEKE QQQQQQQEEKQQQQEEMPSPQNDNFFKVPLQPSGGGFSFALAEQQRRAQEEAKHQALQ LAIAAAKEREAELMAIHEAKVAEAERRKLRERQEEQQRRQREKEEQQKLERQREQEKI ELQLELQRQQKLEQLRQLEKQEREARKKAKTLESYQQIFHLSLTEICRREFQLHSQAC RSYETLIDELTHHLLEQQMQQSLYELGIMRVYMRRWRNYRRAQQQKDTLFNQLPLSFG ADESDRLVEERSVEDSLRLIRRYRLGEPCDYSKLLAGMEEQSWLKLDLWRVLDEWLPR GQPGARRFYKLLLSLPQGEVGFQLDYLINKGLLQHPKSPDAQLALNNDGCYIRGFSQG IALSVLKIWEGNQEKNKLSAANGIICLASVENQRQLPQRLKQLLQASGCQDVAVILLH PPHISYKENKELRHLDLGLHSFHIFPLRQSANLRQRLMIELEAAVRFLARSRERQPAE ELQQAELREFVLGHLGTELFRRLQHAAEQDAAIRKGCQRYPQFCVDLFNEAVRRLQTV AGEDVRDCPLFAEELRAFVEPLPIEATTNRLEHFETGWQLPEQRQRIVQLLERCKLPQ LPQLQQGRSESLCQWVLDCAQVSQPEDCVEQVALQAIKILQTNEEEGYLHFVEFLASE RLQFGLREAGNLPRGIVYRTKTMRSCFLSAWYYEFQEPQICEVASIEEEQPKEKEKME QHLDFDEIMSRAEAVLSRCRRRQEEALRDYNGSSQKTAKSKSKSKLSRDAENHSFSVS RLVSVLRGSLGESQMNATGQVEFRWTPHLSSLVGGGCPDGRERLWRPYVNFNTRLTRK LSACSSLKAMRRGSSSCVLPVNTRHAPKTVQGGKWPIWRHSSMRPLLLPSSNLWTSVL SQRFYAPRLRPAHEDEEELVERRAVPQLQVTQEECEEEEQQLQRRRDGSRLRHQQSAR ERKQKDQEEQLPSALMTPGLASKWRTTSSSTRRHREQQQNVRMTTQTWRRHRRCQPSG GQRIQVVSELEGWRRSANHQPVPVFQGQPAEQEHLRHASCRTSARSMKDVQQSSKMVW EPEERSPWARTMEIVGRMPSIRAAQSSQSSLLMAQESRGKHHRLITKELVYRPIGASQ DQQAEEDQPTSGGGGIKRRLAKRGAPERALLQQHLADLLASTEPNGSFRIGYQPNAPT RQLLEQGKCHVSLRREQFIHLPAVLPKSLIQAADLEVRESPRRESPATRLHRKDGAKR PRPVEVVVKPSLLTVIRQEALNWEPRLVRNAASLEVKKLPQVSKLATHPFKDLEEPRI RNSQRSRGQHPGKRSTTRDMTEGYFLAKRSSSTAIKQGSSSSSKKVRPPRQPVQSPKV QVPSVQRKQRAQEKLWR" misc_feature 143..355 /gene="xmas" /note="RNA recognition motif (RRM) superfamily; Region: RRM_SF; cl17169" /db_xref="CDD:473069" misc_feature 671..1567 /gene="xmas" /note="SAC3/GANP family; Region: SAC3_GANP; pfam03399" /db_xref="CDD:460911" misc_feature <1934..>2242 /gene="xmas" /note="Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]; Region: YqiK; COG2268" /db_xref="CDD:441869" polyA_site 6443 /gene="xmas" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atcccgataa ccaatggcgg caattctaac aacaaaataa aaacacatac gtacgctcta 61 taattgtagt gaaaagggaa ataatagtag ttttaactat aaacgataaa tggcagaacc 121 ccgccccggc gcctacaact acaagaccct gctatgcacc aacatcccgg agctcttcct 181 ggacaaatat gtggcccgct cgcacttcgg ccgcttcggc actctgatga acttcgtcct 241 gcgaccgcgg cgaatgacct gcacggtgag ctatgccagc gaggaggagg cggagctggc 301 cctcctcgag ggcgccacat tccagggcca ccagttcggg atttcctacg cggaaagcga 361 tgcggcgccg gcccagaaaa cggaggagtg ggtggatccc gatgtccagg cggagctgag 421 tgttttgcag tccggttggc ggagtgatta tgctgcttcc aagccaagtg ctgctgctgc 481 tcctcctcca aatcctccca agaatccctc acccgccgcc agggagctgg agaacgtgat 541 gaggcgaccg gcgcacacca gcgaggagcg ctatcgcgtg ctggaggccc gcgataagct 601 gatgcgactg aatcaggcgg ccagaaagaa ccaggagggc ggaggagcca cccagggcca 661 ttgcccggac atgtgtcccg aaaaggagcg agttctccgc gagttccagc gacaggtggc 721 catctacgag ctgcagccgg gctccgatga gctgatctgc catgagaggg cattgaagca 781 atattcccgg agcagcgccg accaggagac gccgcttccc cacgagctgc gcgatgagag 841 ggctttgcac atgaccatga gctacctgat gcacgagatt atggacatct ccgagcaaca 901 ggagtctggg catcatatgg gcgactggtt ccacttcgtt tgggaccgca cgcgctccat 961 ccgcaaggag atcacccagc aggagctgtg ctccctgggc gccgtcaagc tggtggagca 1021 gtgcgcccgc tttcacatcc actgcgccgc tcgcctggtg gccgccgatc ccagtgtctt 1081 cgatagcaag attaatgccg agaatttgac taaatgcctg cagaccttga agtatatgta 1141 ccatgatctc cggctgaagg gcgttcagtg tccgcgggag gcggagtttc gtggctatat 1201 cgtgctgctc aatctggccg atgccaactt cctgtgggac attggccagc tgcccgggga 1261 gctgcagagc tgcccggagg tgcggcaggc catccagttc catttggcgc tgcaggacac 1321 gaactttgtg cgcttcttcc agctgctggt ggacgaggag acgagctatc tgagtgcctg 1381 cattttggtg gcctacttta cgcgtctccg ggttctcgcc ttgcatcgtt tgattcaggc 1441 ttatcgggcg ccgcgcaagg atgaggtctc ctcgctgccg cttagctaca tcaccgacat 1501 gctgagcttc gtcagcgaac aggaggcggc cgactttgtc cagcactacg gattggaggt 1561 caatgagctc gggagagtgg tgctcagccg gatgcacacg gtggagacgg actacaagct 1621 gccgcggcaa atagaactgg tggaaatgaa gagactgcag agcgtgggcg aggtgatttg 1681 cggggagccg ttgccgccgc ggcaccttta cctcgaccac cggccgcaca acagcttcaa 1741 tgagcacgga gtgctcaaga gcgtcgcctg ggcggccaag gatcagttgc ctggcatgga 1801 gaaggagcag cagcagcagc agcagcagga ggagaagcag cagcagcagg aggagatgcc 1861 ttccccgcag aacgacaact tctttaaagt acccttacaa cccagcggcg gcggcttcag 1921 cttcgctttg gccgagcagc agcgcagggc gcaggaggag gccaagcatc aggcgctcca 1981 gctggccatt gcggcggcca aggagcgcga ggccgaactg atggccatac acgaggccaa 2041 ggtagcagag gctgagcgta gaaaactaag ggagcggcag gaggagcagc agcgcaggca 2101 aagggagaag gaggagcagc agaaactaga gagacagcgg gagcaggaga agatagaact 2161 ccaactggag ctgcagcgcc agcagaaact agagcagctg cgtcagctgg aaaagcagga 2221 aagggaagcc cgcaaaaaag ccaaaacttt agagtcctat cagcagatat tccacttaag 2281 cctcactgag atttgcaggc gggagtttca gctgcacagc caagcctgcc gctcctacga 2341 aaccctgatc gacgaactaa cgcatcattt gctcgagcaa cagatgcagc aatccctcta 2401 cgagctgggc atcatgcggg tttacatgcg gcggtggcgc aactaccgtc gcgcgcagca 2461 gcagaaggat acactcttca accagctgcc cttgagtttc ggcgccgatg aatcggatcg 2521 cctggtggag gagcgcagcg tggaggattc actgcgactg atcagacggt atcgtttggg 2581 ggaaccctgc gattacagca aactgctggc tggaatggag gagcaaagct ggctgaagct 2641 cgatctttgg cgcgttctgg atgagtggct gccgcgtgga cagccaggag caaggcgctt 2701 ctacaagctg ctgttgagtt tgccccaagg agaggtgggt ttccagttgg attaccttat 2761 aaacaaagga ctgctgcagc atccgaaatc gccagatgct cagttggcat tgaataacga 2821 tggctgctac atcaggggct tctcccaggg catcgccttg agtgtgctga agatctggga 2881 gggcaaccag gagaagaaca aactctccgc ggccaatgga attatttgcc tggcgagcgt 2941 ggaaaatcag cggcaacttc cccagcgttt aaagcaactt ttgcaggcca gcggctgcca 3001 ggatgtggct gtaatcctac tgcatcctcc tcacatctcc tataaggaga acaaagagct 3061 aaggcacctc gatttgggac tccactcctt tcatatcttc cccctgcggc aatcggcaaa 3121 cctccgtcag cggttgatga tcgaactgga ggcagctgtc agatttttgg ccagatcaag 3181 ggaacgccag ccggcggagg agcttcagca ggcggagctg cgcgagtttg tgcttggcca 3241 tctgggaacg gagctctttc gccgcctgca gcatgccgcc gagcaggatg cggccattcg 3301 gaagggctgc cagcggtatc cgcagttctg cgtggatctg ttcaacgagg cagtgcgtcg 3361 cctgcaaacg gtggctggcg aggatgtgcg ggactgtccg cttttcgccg aggagctgcg 3421 cgcctttgtg gagccactgc ctatagaagc aaccaccaat cgcctggagc actttgaaac 3481 cggctggcag ttgccggagc aacggcagcg gattgtccag cttctggagc gctgcaagct 3541 gccgcaattg ccgcagttgc agcaggggag atccgaatcc ctgtgccagt gggtcctaga 3601 ctgcgcacaa gtgagtcagc cggaggattg cgtggagcag gtggccctgc aggccattaa 3661 aatcctgcaa accaacgagg aggaaggcta cctgcacttt gtggagtttc tggccagcga 3721 aagactgcag ttcgggctgc gcgaggcggg gaatctgccg aggggaattg tttatcgcac 3781 gaagacgatg cggagctgct ttctgagcgc ctggtactac gagttccagg agccgcagat 3841 ctgtgaagta gcttcaatcg aggaagagca gccaaaggag aaggagaaga tggagcagca 3901 ccttgacttt gatgagatca tgagccgggc ggaggctgtg cttagcaggt gtcgccgtcg 3961 ccaggaagag gcactgcggg attacaatgg atcgtcgcag aaaacagcca agagcaagag 4021 caaatcgaag ctatctcgcg atgccgaaaa tcactctttt tcagtgtccc gcttggtttc 4081 ggtgctcagg ggctccctcg gcgaatccca gatgaatgcc accggtcagg tggagttccg 4141 ctggacgccg cacctctcgt cgctggttgg aggaggttgt ccggatggaa gagagaggct 4201 gtggcggccg tacgtgaact tcaacacccg gctcacccgc aagctgtccg cttgctcgag 4261 cttgaaggcg atgaggcggg gatcctcgag ctgcgtgctg cctgtgaata cccgccacgc 4321 ccccaaaacg gtgcagggcg gcaagtggcc catctggcgg cactcctcga tgcgaccgct 4381 cctgctgccc tcgtccaatc tttggaccag tgtgctcagc cagcgtttct atgccccgcg 4441 gctgcgtccc gcccacgagg atgaggagga gctggtggaa cgccgggcgg tgccccagct 4501 gcaggtgacc caggaggagt gcgaggagga ggagcagcag ctccagcggc gaagagatgg 4561 cagtcgcctg cggcatcaac aatcggcgag ggaaaggaag cagaaggatc aggaggagca 4621 actgcccagc gcactgatga cccccggatt ggccagcaag tggaggacca ccagcagctc 4681 caccaggagg caccgggagc agcagcagaa cgtccgtatg accacccaga cctggcgaag 4741 gcatcgcagg tgccagccga gcggcggcca gaggattcag gtcgtctcgg aactcgaggg 4801 ctggcggaga tcggccaacc atcagccggt gcccgttttt cagggacaac cagccgagca 4861 ggagcacctg cggcatgcca gctgcaggac gagcgccagg agcatgaagg acgtccagca 4921 gagcagcaaa atggtctggg agcccgagga gcggtcacca tgggctcgca ccatggagat 4981 tgtgggccga atgcccagca tccgggcggc ccagtcgtcc cagtcgtccc tgctgatggc 5041 ccaggagtcg cggggcaagc accacaggct gatcaccaag gagctggtct acaggcccat 5101 aggagcgtca caggatcaac aggcggagga ggatcaaccg accagcggag gcggaggcat 5161 caagagaagg ctggccaaac gtggcgcacc ggagcgggca ttgctgcagc aacatctggc 5221 cgatctgctg gcctccactg aaccaaacgg ctcctttcgc attggctacc agccgaatgc 5281 gcccacccgg cagctgctcg agcagggcaa gtgccatgtg tcgctgcgtc gcgagcagtt 5341 catccatctg ccggccgtgc tgcccaaatc gctgatccag gcggccgatc tggaggtcag 5401 ggagtcgccg cgccgcgagt cgccggcgac caggctgcat cgcaaggacg gcgccaagcg 5461 gccgcgtccc gtggaggtgg tggtcaagcc atcgctgctc accgtcatcc ggcaggaggc 5521 cctcaactgg gagccgcgtc tcgtgaggaa tgccgcctcc ctggaggtca agaaactgcc 5581 gcaggtgagc aaactggcga cgcatccgtt caaggatctc gaggagccgc gcatcaggaa 5641 ctcccagcgc agccgagggc aacatcccgg caagcggagc accaccaggg acatgaccga 5701 gggctacttc ctggccaagc gcagctcgtc gacggcaatc aagcagggat catctagctc 5761 ctccaaaaag gtcaggccac ccaggcagcc ggttcaaagt ccaaaggttc aggtgcccag 5821 cgttcagcgg aagcagagag ctcaggagaa gctctggaga taaagctccc gatgatctat 5881 attatatatc atctgttttt accatgaaaa cccggacgaa gagaaggcaa atccacattc 5941 gaagcggaat tccaaattga gcagtgaaca ctacaaatat atatacatgc acacctggtg 6001 aatcgatgct cctccccgga gacctctttg aaatcgcaag acccaaccac ttcaaaactc 6061 taaaaattat ctatccaaaa ctgtcagaaa ttcgagaaat tcaaaatcac cgcaagaggg 6121 cgctttttct tcgaaaatta tcgctttcat cacatttttg gcacacattc ttagtagttc 6181 ttcttttcaa gtagcttggc cttgttcctt tttttatata gatactgttt ttggataatc 6241 agagacagcc gtgtttcaat gccgtttaaa ttgagaaatt agtgttacta ggtgtcaaaa 6301 tcgtagttgt tacgtattag ccattaccaa aaaaaaaagg gaagaatgtc aaacacataa 6361 ctcaatacgc tttaaaatta tggacagtgg tgacactatg tataaattct ggaataataa 6421 cggaaataac tggatgtctc gaa