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LOCUS XM_044393493 3685 bp mRNA linear INV 09-DEC-2024 (LOC108056672), transcript variant X7, mRNA. ACCESSION XM_044393493 VERSION XM_044393493.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044393493.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3685 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3685 /gene="LOC108056672" /note="uncharacterized LOC108056672; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056672" CDS 936..3062 /gene="LOC108056672" /codon_start=1 /product="uncharacterized protein isoform X2" /protein_id="XP_044249428.1" /db_xref="GeneID:108056672" /translation="MAGPQVQHSQRPNSAYYTGLNGSNGSGGGGGSSAGLTSSASHTG LHALRQVSNETELIYRGSHSNGTVNELPSTAQHHLLTARGAQQIGRDQGLSQGHHHQT VSSIAGTGSSVTDALIIGGGGGGGGSGGGGGGGGPSGSSCSTAALGIKKSSTQRSIEI IVDASQCGKELVASGSGGGAAAIASSTLDMEDVEQGGGGGGQESSSSHRKSSRHRHRP LHRRLITYLRNLFQGSTTQNDSELEEFETPARYRPDSLSALSRATRFTEDEIKRIYRG FKAECPTGVVKEDTFKVIYSQFFPQGANPTLYAHYVFNTLDQDHSGIVSFEDFVQGLS ILSRGSVEEKLRWTFSLYDINGDGFITREEMTDIVTAIYELMGRLPDECPEEEKIKGK VEQIFQKMDTNRDGVVTLEEFLEACRNDDAISRSMSYTVPRRRRQQQQQHHQHHQHHQ HHQQEPEKRKSNHKTKNKQQQKQQEKQQQPHSTRHQNCCHIIDMDGDSTASTTTASAA TGTTLNLNEDNEREDRDGESESDSEDQAFVCRHCQRPQSQQLHQQPRSKSKSKSKSRK RSKSRKRNQGNQPTRWPEINVANEQAIRFRCPQVGPQVGRDLHTPQPMHFHHPIHQSQ GQSQSQRAKNKSRHPRKARSSPAAAQQPPVAAAAEPLPPLPPLNVIVPAEGEGEAEGE QPTTPDSPSLVTVSTWYTVAKQGVSC" misc_feature <1857..2189 /gene="LOC108056672" /note="Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]; Region: FRQ1; COG5126" /db_xref="CDD:444056" polyA_site 3685 /gene="LOC108056672" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atttatgtgc ataaatattt gccagcacct tcaggcggtt attgttatta ttattacagt 61 ctcgggtttt tagtttttag ttttaagatc gatgctggcg acgacagccg ctaagcaggc 121 agatttttaa tattctggga attgtatctt ttttgtttag ccttctgaca ttcgagatgt 181 ttttatgttt aatatttttt attaattgtt tacccataca ccagagatac aaatgttata 241 ccatgtttac acttgttttt aatagctgca ttaaattatt gttactatcc cttttgtgtt 301 gttattgttt ccaaatatat ttcctttgtt ctcccgacta aataaatcat aaatggcagt 361 ttaaacaaaa cgacgaaggc aatgaataaa tgtttgagcc aaaattaatt atgaaataaa 421 tttaataatt tacgcctgac atgcattttt gtggcataaa tcatagatgc actgagaaaa 481 aatacaaaaa caatgtgaaa aaagaagaaa aataagaaaa gaaatctacg ggaaaatact 541 taaatatata tagatccata aacaaaccga tttatatata ttcgagtcgg gggtatttga 601 ttgatttgtg gcaactatca aacaacaaac caaaaaacaa cccaacagca agtcaacaaa 661 aacaacaaca acagcagcaa gaactacagc aagaacaaga acaacaacaa cgactgcgga 721 tgtcgccacg cttaacccct aacaaagtcc gcctaacaaa gtcaccgccg caaacgtaaa 781 catgtaaatg cccgccatgc cactaaaacc actaaaacca gctagcgatt aaagtcagac 841 gtctagagag gatcgggagg aggatcagga gactgaggag gaggaggagg aggaactagc 901 cgccgcaaaa ggaataaaac actgagagaa acgagatggc cgggccgcag gtgcagcaca 961 gccagcgacc caatagcgcc tactacacgg gtctcaatgg atcgaatggt tctggtggag 1021 gaggcggatc ctcggctgga ttaactagca gtgcatcgca tactggcctg catgccctgc 1081 gccaggtgag caacgaaacg gagctgatct accgcggcag ccacagcaat ggcaccgtca 1141 acgagctgcc ctccaccgcc cagcaccact tgctcaccgc ccggggggcc cagcagatcg 1201 gaagggatca gggattgagc cagggtcatc atcaccagac ggtgagcagc attgccggca 1261 cgggttcgag tgtcacggat gcccttataa tcggcggtgg aggaggcggc ggaggaagcg 1321 gaggaggcgg cggtggagga ggcccctctg gcagcagctg ctccacggcg gcactgggta 1381 tcaaaaagtc cagcacgcag cgcagcatcg agatcatcgt ggacgccagt cagtgcggca 1441 aggagctggt ggccagtgga tcaggtggcg gagcagccgc catcgcctcc tccaccttgg 1501 acatggagga tgtggagcag ggcggcggag gaggcggcca ggagtcctcc tcctcgcacc 1561 gcaagtcgtc gcggcatcgc catcgaccgc tccaccggcg gctcatcacc tatctgcgga 1621 acctcttcca gggcagcacc acccagaacg attccgaact ggaggagttc gagacgccgg 1681 cacggtacag gcccgactcg ctaagtgcgc tgagccgcgc cacccgcttc acggaggacg 1741 agatcaaacg aatttaccgg ggatttaagg ctgagtgccc gacgggcgtc gtcaaggagg 1801 acaccttcaa agtgatctac tcgcagttct ttccacaggg agccaatcca accctctacg 1861 cgcactatgt atttaataca ctggatcagg atcacagcgg cattgtcagc ttcgaggact 1921 tcgttcaagg actctcgata ctgtcgcgcg gctccgtgga ggagaagctg cgctggacct 1981 tctcgctgta cgacatcaat ggcgacggct tcattacgag ggaggaaatg actgacattg 2041 taactgccat atacgagctg atgggccgcc tgcccgacga gtgtcccgag gaggagaaga 2101 tcaagggcaa ggtggagcag atcttccaga aaatggacac caatcgcgat ggcgtggtca 2161 cgctggagga gttcctggag gcttgtcgca acgacgacgc catctcccgg tcgatgtcct 2221 acacggtgcc ccggcggcgg cgacagcagc agcagcagca tcatcagcac caccagcacc 2281 atcagcacca ccagcaggag ccagagaaac gtaagtccaa ccacaagacg aagaacaagc 2341 aacagcagaa gcaacaagag aagcaacagc aaccacatag cactagacac caaaactgtt 2401 gtcacatcat cgacatggat ggcgatagca ccgccagcac caccaccgcc tcggcggcca 2461 ctggaaccac actcaatttg aatgaagaca atgagcggga ggatcgggat ggggagtctg 2521 aatccgattc cgaagatcag gcctttgtct gccggcactg ccaaaggcct cagtcgcagc 2581 agctgcatca gcagccaaga tccaagtcca aatccaagtc aaagtcgagg aagcgcagca 2641 agagcaggaa gagaaaccag ggtaaccaac ccacgaggtg gccggaaatc aatgtggcca 2701 acgagcaggc catccgcttc cggtgtccgc aggtggggcc gcaggtgggt cgcgaccttc 2761 acacccccca gcccatgcac ttccaccacc ccatccacca gtcgcagggt cagagtcaaa 2821 gccagagggc caagaacaag tcgcggcatc cgcggaaggc tcgatcctcg ccagcggcag 2881 cccaacaacc acctgtcgca gcagcagcag aacccctgcc acctttgcca cccctcaacg 2941 tgatcgtgcc agcggaaggg gagggggagg cggagggtga gcaacccacc acccccgact 3001 ccccgtcgct ggtcaccgtg agcacctggt acacggtggc caagcagggt gtctcctgct 3061 aatcgctaat cgctgagcag tgagtatcct tgccagcacc acccaaccaa ccacccaacc 3121 acattgcacc acactcaaaa aaaaagaaat ataccgcaat gccactgaaa actctaaaca 3181 ttatctagag atttcggtgg caaaccaacc cccaacccca ttggaaacca tttgcccgtt 3241 tcggtgtttc aatatatgta taaaatatat atatattgtg tgcttttatc aattatatgt 3301 tagttttttt tagggtggat accgcataaa tcaaaattgg caaacttaaa gaaggattaa 3361 tcatttttat ttgcccttaa aacacgataa tctattttta aacttaaaat gggaaaagag 3421 aaatcctaaa attgtaaata cttttttttt aataagcata ggaatacaaa ttaaaatcgg 3481 gatccaccct accgtaaatg tttatttgta ctatgaaagc gtaaacaatg ttgaaaagat 3541 gaatttaaaa cgttctctgt gtgtatcgat tgatgttgca aactgtcaaa tgtgttatag 3601 tcttaaatac tacatataaa tctatagaaa atgtaagtga aaatgaacca aaaatcgaaa 3661 tatatgaaaa gcattcaaac tctta