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LOCUS XM_044393381 2338 bp mRNA linear INV 09-DEC-2024 member TH1 (TH1), transcript variant X2, mRNA. ACCESSION XM_044393381 VERSION XM_044393381.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044393381.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2338 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2338 /gene="TH1" /note="negative elongation factor complex member TH1; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108059545" CDS 97..1866 /gene="TH1" /codon_start=1 /product="negative elongation factor D isoform X1" /protein_id="XP_044249316.1" /db_xref="GeneID:108059545" /translation="MEVEYDESGWQGRAKGQSNPEEMLEDNPQKTIQECLEKFLTPDY IMEPGIFTQLKRYFQSGGSPEEVISMLSENYKAVAQMANLLAEWLILAGVKVTEVQAM VENHLKEMILKSFDPKKADTIFTEEGETPDWLTEMIDHYTWRSLIYRLAEEYPDCLML NFTIKLISDAGFQSEITSISTAAQQIEVFSRVLKTSIVKFLNNPDDVHGAIQECARMV CHGQHTYVYSQVLIQVLSQEQKGGFNMKRLSQEIIKYALQNNQNVTPITMALNGSAVY PQACQALTSMLTRNTLNPADITVLFRNYSGSDPPPIDLIRNPQFLELLVDALFRSGVK INPEHKPKYMFLLAYASAVIDQPAKKRPMTERMLNKEELKSTIQAIEKAHTICNVDQG STELIAELQTLYNCIKYPVVGVGVIRWIENVVMEPSYFKLSTDSCPTHLAVLDEVAAV HPTLQQQILFLLIRLFESKQDELEILVQLEMKKMILDRMVNLLTRGCVVPVLRYIKQC CAIEDTDISLIRYFVTEVLETITHPYSPEFVQLFLPMVENEEITGTMRGEGDNDPVNE FIGEQLMVPGSLHLHLTFVCHLF" misc_feature 100..1800 /gene="TH1" /note="TH1 protein; Region: TH1; pfam04858" /db_xref="CDD:398497" polyA_site 2338 /gene="TH1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agctgttaac tgccatacta aaaaatttat aaaatcaaat caaaataaga aaataatatt 61 agttatatgt tactgtaaat aagttggaga gcgaaaatgg aagtggaata cgacgagtcc 121 ggctggcagg gccgcgccaa gggacagtca aatccggagg aaatgctcga ggacaatccg 181 cagaagacga tccaggagtg cctggaaaag ttcctcacac ccgactacat catggagccg 241 ggaatattca cgcagctgaa gcgctacttc cagtcgggcg gctcccccga ggaggtcatt 301 tcgatgttgt cggagaacta caaggcggtg gcccaaatgg ccaacctgct ggccgagtgg 361 ctaatcctcg ccggcgtcaa ggtgaccgag gtgcaggcga tggtggagaa ccacctcaag 421 gagatgatcc tcaagtcctt cgatcccaaa aaggccgaca ccatcttcac ggaggagggc 481 gagacgcccg attggctaac cgagatgatc gatcactaca cgtggcgttc gctgatctac 541 cgactggccg aggagtatcc cgactgcctg atgctcaact tcacgatcaa gctgatctcg 601 gacgcaggct tccagagcga gatcacctcc atttcgacgg ccgcgcagca gatagaggtc 661 ttctcgcggg tgctcaagac ctcgatagtc aagtttctga acaatccaga cgacgtgcac 721 ggcgccatcc aggagtgcgc ccgcatggtc tgccacggcc agcacaccta cgtctactcc 781 caagtgctca tccaggtgct tagccaggag cagaagggcg ggttcaatat gaagcgcctc 841 tcccaggaaa tcatcaaata cgccctgcag aacaatcaaa atgtgacgcc tattacgatg 901 gccctaaatg gctcggcggt ctatccgcag gcatgccaag cgctaacctc catgctcacc 961 cgcaacacac tcaatcccgc cgacatcacc gtcctgttcc gcaactattc gggctccgat 1021 ccgccgccca tcgacttgat ccggaacccc cagttcctgg agctcctcgt ggacgccctc 1081 ttccgttccg gcgttaagat caaccccgag cacaagccga agtacatgtt cctgctggcc 1141 tacgcgtcgg cggtcattga ccagccggcc aagaagcggc cgatgaccga gcgcatgctg 1201 aacaaggagg agctgaagag caccattcag gctatagaga aggcgcatac catctgcaat 1261 gtggaccagg gctccactga gttgatcgct gaattgcaga cgctgtacaa ttgcatcaaa 1321 tatcccgtgg tgggggtcgg tgtgatacgg tggatcgaga acgtggtaat ggaaccgtcc 1381 tactttaagc tctccacaga cagctgtccc acgcacctgg cggttctcga cgaagtggcc 1441 gccgtgcatc ccacgctgca gcagcagatc ctgtttctgc tcatccgcct gttcgagtcc 1501 aagcaggatg agctagagat tctcgtgcaa ttggagatga agaagatgat cctggaccgg 1561 atggttaacc tgctaacacg cggctgcgtt gtacccgttc tacggtacat taagcagtgc 1621 tgcgccatcg aggacacaga catttcccta atccggtact tcgtcaccga ggtgctggag 1681 accatcacac atccgtactc cccggagttt gtgcaactat tcctgccgat ggtcgagaac 1741 gaggagatca ccggcacaat gcgcggtgag ggcgacaacg atcccgtgaa cgagtttatt 1801 ggtgagcaac tgatggtccc cggctctctt cacttgcatc tgacctttgt ttgtcatctc 1861 ttttagttca ctgtaaggcg cactacacga ctgtatagaa ggtggcaata agtttacaaa 1921 cgtcttttgt gcaacaattt ttttttctaa cacattttta acaacaaaaa catacggaag 1981 cctcccgtta agaaaaaagt aaatttaata tttcgtatat ctaggtataa ctattcaaaa 2041 ttttatcatg aactcaactt taactgttaa tttttttaat ttgcttgtca tattttttta 2101 taacattaag ctgaaaagcc gacggccccg aaaaacttta atatttgcaa acttttttat 2161 tatcgtatat aagtttaaat tttgaagcaa ttaccgaatt ttgctttaaa aaatcaatta 2221 tatatcgtcg aatcttaaaa aaaattgtat agctcttagg aaaattttac tgtataaatc 2281 cgtagttcat aaaacccaaa taaagctact gatacgttat tactacaaaa taactgaa