Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_044392997 4425 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_044392997 VERSION XM_044392997.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq; corrected model. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044392997.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## internal stop codons :: corrected 1 genomic stop codon ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..4425 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4425 /gene="Sxl" /note="Sex lethal; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:108068121" CDS 601..2820 /gene="Sxl" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon" /codon_start=1 /transl_except=(pos:1711..1713,aa:OTHER) /product="LOW QUALITY PROTEIN: uncharacterized protein Sxl" /protein_id="XP_044248932.1" /db_xref="GeneID:108068121" /translation="MYGNNNPGSNNNNGGYPPYGYNNKSSGGRGFGMSHSLPSGMDTE FSFPSSSSRRGYNDFPGCGGSGGNGGSANNLGGGNMCHLPPMASNNSLNNLCGLSLGS GGSDDLNMMMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYS FGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTIT DDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGS QPLSVRLAEEHGKAKAAHFMSQMGVAAPNVPPPPPPPPPHMAAGFNNMVHRDGAMEKL RSLFDAICDAIFGLDSDNFADLLDGLYRRKYHYPYLXLTPQQQQQLLQHQQQALGFTG STNNMIGNGNANENNMLLYHQHYHQQQQQQQRLGNVAAHSSMSPNGSNNNINNTNTNS INFNTIRQNGVAALHYLQEQLQLQQPQEQQSQQQQQPLTMPSPPPYQHQQQQQSRHQP HHNGNSSSSLGNQLLAIGSNNNNSFNNNSNHSNSFSGNYNNASAFTNNGASGSSSGGG NNFAHNNSASSGNNFTNNPTSSGNYSNNAASGSNFSNNLSGNYTNSSSRNYTNNAASS SNNFSNNAASGSNYNKNPSSSNMIGNSNTDSNNTNNHHTSPQHDFSFNMSTTEQELHQ QTLKLQQLHLGNSFNNTAAAAATSTTTSAAAATSTSTTATAASSSTNPTNVGFLWRT" misc_feature 646..1581 /gene="Sxl" /note="sex-lethal family splicing factor; Region: sex-lethal; TIGR01659" /db_xref="CDD:273740" polyA_site 4425 /gene="Sxl" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcagaaaagg tcgcactttc gagtactttt tcaccctacg ataccctaca acacagtttc 61 gactcgcaca ctgctttttg ttgttgccga gcgaggaaag tcagtccgcg cagtgaattt 121 ttttctgtac caacaacaac aacaactcta tcatctcttc aactactaca acaactataa 181 caacagcgcg cctacaagaa cagcaataat aagcacacac tcagagaaaa accataggaa 241 ttaagagcag aagaggaaag caccagtgtg tgtgcatgta aaaaagagaa agaaagaaag 301 taagagagca acaactatat atgagtacaa cacacaagaa gaagagcaat acagaaaaag 361 ttgaagagag gcagcaacag aaacaacaac aacaacacca gcagcaggcc agctgagagc 421 gctgagcgcc aacaaaaaaa aaaggattcg aggaagtgat cgaagacgat cgatcctaac 481 tcaccagaac tcacctcatc atcattatca tcctttaacc cccccaaaac cgaaactcac 541 cttcgatcga gggtgtaact tttgttgatt cgaaaaacac acactcgcaa ctctcaggat 601 atgtacggca acaataatcc gggtagtaac aataataacg gtggttatcc cccatatggc 661 tacaacaaca agtcgagcgg tgggcgtgga tttggcatgt cccattctct accatccgga 721 atggatacag aattttcatt tccaagttcc tcgtcgcgtc gcggttacaa tgatttcccc 781 ggctgcggcg gtagcggcgg aaacggcggc agtgccaaca atcttggcgg cggcaacatg 841 tgccacctgc cgccgatggc cagcaacaat tcgctgaaca acctatgcgg cctgtcgctg 901 ggcagcggcg gtagcgatga tctcaatatg atgatgaacg atccgcgggc gagcaacacc 961 aacctgattg tcaactactt gccccaggac atgaccgatc gcgagctgta cgccctattc 1021 agagccattg gacccatcaa cacgtgcaga atcatgagag attataagac tggctacagt 1081 tttggttatg ctttcgtgga cttcacatcg gaaatggact cgcagcgtgc gattaaagtt 1141 ctgaatggaa tcacagtgcg caacaagcgg cttaaggttt cctatgcccg tcccggcggc 1201 gaatcgatca aggacaccaa tctatatgtg accaatctgc cgcgcaccat aaccgatgat 1261 cagctggaca cgatcttcgg caagtacggt tccattgtgc agaagaacat cttgcgtgac 1321 aagctcaccg gtcgtccacg tggcgtggct tttgttcggt acaacaagcg cgaggaggcc 1381 caggaggcca tatcggcgct gaacaacgta atacccgagg gcggatcgca gccactgtcc 1441 gtccggctgg ccgaggagca tggcaaggca aaggcggcgc actttatgtc ccagatgggc 1501 gtggctgcgc cgaatgtccc accgccgccg ccaccaccgc cgccgcatat ggccgccgga 1561 ttcaacaata tggtgcacag agacggagct atggaaaaat tacgctcatt attcgatgct 1621 atatgcgatg ctatctttgg tctcgatagc gacaactttg ccgatttgct tgacggactg 1681 taccgcagga agtaccatta tccctactta taattgacac cgcaacagca gcagcaacta 1741 ctacaacatc agcagcaggc gttgggcttc accggcagca ccaacaatat gattggcaat 1801 ggtaatgcta acgagaacaa catgctactc taccaccagc attaccatca acaacaacaa 1861 caacaacaac gcctgggcaa tgttgctgct cacagtagta tgagtccaaa tggaagcaat 1921 aataacatca acaacacgaa caccaatagc atcaacttta atacgatacg ccagaatgga 1981 gttgctgcac ttcactatct tcaggagcaa ttgcaattgc aacaaccgca ggagcaacaa 2041 tcacaacaac aacagcagcc tttgacaatg ccatcgccgc cgccgtatca acatcaacaa 2101 caacaacaat cgcgacacca accacaccat aatggcaaca gtagtagcag tcttggcaat 2161 caattgctcg ccataggcag taacaataac aatagcttca ataacaattc caatcactcc 2221 aatagtttta gtggcaatta caacaacgct agtgctttca ccaacaacgg tgccagcggc 2281 agcagcagcg gtggcggcaa caactttgcc cacaacaact ctgcgagcag tggaaacaac 2341 ttcaccaaca accccacaag cagtggaaat tactccaata atgcggctag cggcagcaac 2401 ttcagcaaca atctttctgg caattacacc aacagcagca gcagaaacta caccaataat 2461 gcggctagca gcagcaacaa cttttccaac aatgcagcta gcggtagcaa ttacaacaag 2521 aatcctagca gcagcaacat gattggaaac agcaacactg atagcaacaa caccaataat 2581 caccacactt cgccgcaaca cgacttcagt tttaatatgt cgacaactga acaagaactg 2641 catcagcaaa cactaaagtt gcagcagctg caccttggca acagcttcaa caacacagca 2701 gcggcagcag cgacatcaac aacaacatca gcggctgctg caacttccac ttccacaacg 2761 gcaacggcgg catcatcatc cacgaacccc acaaatgtcg gattcttatg gcgtacataa 2821 ccagagagtt gagaagcgta cgatgaaggc aatcttcaaa ttagaaatta tatataacaa 2881 acttatatat atctatatat atatatataa aactatgaat accttatatt gatcatcgta 2941 gtatcagcat ccatcgaaac catatacaga aacccaaatt tttatgttct caaaccccaa 3001 gaattaatta actatatact tttttttttg tatgttcctc actttaaccc ttatgttgta 3061 gttggttttt ttgtgctttt ttttgggaag aatctttttt ttctttttgt aactagctgt 3121 aaggcaagac acgtatatgt atacaaatca taaataatta tatataaata tatatataga 3181 atgagagatc gacgaagaag tcgatcaatt tttttgctta aacttagaga aaagaaacct 3241 atgagaaata catttttttg tcacatattt ataacgtata atcgtaaaga aatacaacaa 3301 aatatattat atacaaaaac acacacatta tatatctata actatataac atacttgtag 3361 gcgtgaagac ataagctctg attgtttagt tttttttttc tctgtgtctg aaactgattt 3421 ttttggcgcg aactatgccg caacaacgta cacgggcatc gtgtatgttt atagctgaag 3481 taaatcgaga tatatgaata catattactt tttttttcat aatttataaa tccatttttt 3541 ttgtctatat tatatacgta acgaaatggc taaaccggct ggacatgctc aagttttcag 3601 gctgtttatt actacattta aaacgaaaca aaaacaaaaa cataaatact tagctagaaa 3661 tatgcttgag taggagaagg agaaagagac ccagacaaaa ttacaataca aacccaattt 3721 ttttcatagc tataatgaat atgtattttt tttactaagt ataactactt tttttgaaat 3781 ccattttttt tattacttta cgaaaaaact tgagcatgta gcagcaagag aaacgaagcg 3841 aagcaaaata acattcaaaa tccgagtaag aaaagaaacg tgataaatag cccgacaaaa 3901 tgaaaatcag aagaaattgg aaagtagaaa gaaaaaatag aaacgaaatc gaaagaaacg 3961 gaaaaaagag aacacgaaat cattggagtg acttggcttt attttcaact ttaaataact 4021 cgaagaaagc acatcgttaa tgttttaact ttgtatttta ttttaagttt ttgtttttaa 4081 tccttttatt ttacccaatt ttcgatattc caattcagcc agtcactcca cctgcagaca 4141 acagataatt tttcggtgta ggtgcataaa ttaatggaag agaacaagag atattatgcg 4201 atgatccttt ttgctaaatt ctttaaatac ttttattaat tacttataaa caaacaaaaa 4261 aatgtaaaaa attttaattt gttaaaaaaa cgtgaaaaac atttcagaat ttcaatttta 4321 ttttattatt ttattaccat gtctctggct taaaacaaaa cttacaagaa actaagaaaa 4381 gcattattta aggcaactta ataaacattt tcgacacaaa cagca