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LOCUS XM_044392976 2911 bp mRNA linear INV 09-DEC-2024 (LOC108062301), transcript variant X1, mRNA. ACCESSION XM_044392976 VERSION XM_044392976.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044392976.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2911 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2911 /gene="LOC108062301" /note="NEDD8 ultimate buster 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108062301" CDS 285..2108 /gene="LOC108062301" /codon_start=1 /product="NEDD8 ultimate buster 1" /protein_id="XP_044248911.1" /db_xref="GeneID:108062301" /translation="MSNLDNIFIQVRARLQSEGVKLWEEPYYSEDLGSIEGALENLAK DYSRVMGFDVCRCKFILTELQENALRKLAARREFSSTGVATFKVRRIDKHSGTTMLDI KCDLNSLGSDLQAVIADRLQLPRAEHVKCIAAGRMVAANATLADQLLRNNQQLMVVVG DGGNAGEALYERINRVKADVQAVVSSQNRLIEMEDQNGSPVFLPPAENRALLLGLGFC EKARAAMLREDFEEGLLLLLEADESFATCDSQFLESVDNYALLNLDIVWCYLCLKNVT QLPDAERRLAICGRNFRRSYGENFERLYALKGKACPERALIMRLQLLQGVVMFHQNRR DEAFERFEAANILLRELKINGDQLALLVEMGFEAQESRLALRSCSGDSNIEAAVQFIQ ERRQQLKDARKQSKAERALQRRLMRTDGNDCDWVNPRSVCTLTEMGFEAGLATAALKR SKNDLAKAVELLQTEAEVLRAALPRNSVASDQDKLAQLLQLGFNEANSRVALENASNN MERAIECLLRAFQSEEELRETIERVGRLAFDGPSTSSASTAPPSPIIEAVLKHARSEI ETYQAYERFNADISQNDMDYLDLPLVQEEKVLQEYLGLLQQ" misc_feature 528..761 /gene="LOC108062301" /note="ubiquitin-like (Ubl) domain found in NEDD8 ultimate buster 1 (NUB1) and similar proteins; Region: Ubl_NUB1; cd17062" /db_xref="CDD:340582" misc_feature order(549..551,624..626,690..692) /gene="LOC108062301" /note="key conserved lysines; other site" /db_xref="CDD:340582" misc_feature 1344..1457 /gene="LOC108062301" /note="UBA1 domain found in NEDD8 ultimate buster 1 (NUB1) and similar proteins; Region: UBA1_NUB1_like; cd14291" /db_xref="CDD:270477" misc_feature 1575..1664 /gene="LOC108062301" /note="UBA domain found in proteins involved in ubiquitin-mediated proteolysis; Region: UBA; cd14270" /db_xref="CDD:270456" misc_feature 1731..1844 /gene="LOC108062301" /note="UBA domain-like superfamily; Region: UBA_like_SF; cl21463" /db_xref="CDD:473871" ORIGIN 1 aattttcatt tcacaacgcc gactaatcgg cgcatttgat ttgattcgtg tttatttgtg 61 tcgtatgatt ttcttttcag tttaaatttg gtatttgcta tttgctttga gtgaaaacca 121 ggaaaatcac gcggaaatcg ctgattgcgc atcttctttc tctttgtttt gttcttgttt 181 ttgttgtggc gcagaaacac atgtgcgcgg tgtaagaaga agaagaacaa taacatcata 241 tcatttgttt tttggctaca ttttgtgcat catcatcgtc ggaaatgtcg aatctggaca 301 acatattcat ccaggtccgg gcacgcctcc aatccgaggg cgttaagctc tgggaggaac 361 cctactattc cgaggatctt ggcagcatag agggcgctct ggagaacctg gccaaggact 421 actcccgcgt catgggcttc gatgtgtgcc gctgcaagtt catcctgacg gagctgcagg 481 agaatgcgct ccgcaagctg gccgcccggc gggagttcag ctccacagga gtggccactt 541 tcaaggtgcg tcgcatcgac aagcacagcg gcaccaccat gctggacatc aagtgcgact 601 tgaactccct gggctccgat cttcaggcgg tcatagccga caggctgcag cttccgaggg 661 ccgagcacgt caagtgcatt gcagccggca gaatggtggc cgccaatgcc acgctggctg 721 accagctgct gcggaacaac cagcagttga tggtggtcgt gggcgatggt ggcaatgccg 781 gcgaagccct ctacgagcgg atcaatcgag tgaaggccga cgtgcaggca gtggtctcct 841 cgcagaatcg tctcatcgag atggaggacc agaacggcag ccccgtcttc ctgccacccg 901 ccgagaatcg cgccctgctc ctgggcctgg gtttctgcga gaaggcccgt gcggccatgc 961 tgcgcgagga tttcgaggag ggcctgctcc tccttctgga ggccgacgag tccttcgcca 1021 cctgcgactc gcagtttctc gagtccgtgg acaactatgc cctgctcaat ctggacatcg 1081 tctggtgcta tctctgcctg aagaacgtga cccagctgcc ggatgccgag cgtcggctgg 1141 ccatctgcgg gcgcaacttc cggcgcagct atggcgagaa cttcgagcga ctgtacgccc 1201 tgaagggcaa ggcctgcccc gaaagggcgc tcattatgcg gctgcagctg ctccagggcg 1261 tggtgatgtt ccaccagaat cgccgcgacg aggccttcga gcgcttcgaa gcggccaata 1321 ttctgctgag ggagctcaag atcaacggcg accagttggc tctcctcgtg gagatgggct 1381 tcgaggccca ggagtcgcgg ctggcgctgc gctcctgttc gggcgacagc aacatcgagg 1441 cggccgtgca gttcatccag gagcggcgtc agcagctcaa ggatgcccgc aagcagtcga 1501 aggcggagcg ggccctgcag cgccgcctga tgcgcaccga tggcaacgat tgcgactggg 1561 tgaatccgcg cagtgtctgc acgctcactg aaatgggttt cgaggcggga ctggcaacgg 1621 cagccttgaa gcgctccaaa aatgatctgg ccaaggcggt ggaactgctg cagaccgagg 1681 ccgaggtgct gcgtgccgcc ctgccccgca acagtgtcgc cagcgaccag gacaagctgg 1741 cccagctgct ccagctgggc ttcaacgagg ccaactcgcg cgtggccctc gagaacgcct 1801 cgaacaacat ggagcgggcc atcgagtgcc tgctgcgcgc ctttcagagc gaggaggagc 1861 tgagggagac catagagcgt gttggccgcc tggccttcga tggcccatcc acctcgagtg 1921 cctcgactgc tccgccatcg cccatcatcg aggcggtgct gaagcatgct cgctccgaga 1981 tcgagaccta ccaggcctac gagcgcttca acgcggacat cagccagaat gacatggact 2041 acctggactt gccgctggtg caggaggaga aggtcctgca ggagtatctg ggcctgctgc 2101 agcagtagaa tgccatcgcc gccttaactt agctgttata tcgaaataga aaccggttgc 2161 gggccgtaac tgtaatcatg acttgtctat attgcaaatc gtagtcttat aatggcactt 2221 aagtggcatt cagtcgtttc tccagctggg caaatagtaa catataaagt ataaagcccc 2281 ttcgctattg acaactgcga aatgtgatta cgaatccacc tttctgagcc acctgaaact 2341 tgttagcgcc tctggcaatt accttttttt atccgtatct ctattttttg tcgcttgact 2401 ctcgaccccg gctcgaacgg cagcgcttga ttggctccag tcgtgacctt gtgggggcca 2461 aagggcgccg cccactaagc tcatcccccc aagccgaatt gaatggaatt tacccgatct 2521 tctttggaaa ttaatcagct taacgaggca tttttaaaac aactcgtata ccaaggaatg 2581 gggaagtttg tagggatttt taatacttgg aaatttaaaa tggaacttta tttgttgttt 2641 tgtctatttt ttatacgaat taaacccttt tcataacaag ggaaaaatga aaagactgac 2701 gattttattt gttaggtggt ttagctttcg agagtgctaa tgaaaaaact gtgtggaata 2761 tatgtgacta aaatttaagg tgatggcatt atatatatgg tgctgtcttt cttttccaat 2821 cggtttcaaa caaaaaaact ttacaaaaaa tgtgtcaatc gctcaaatat tttatatttt 2881 tctaagaata atcttaaggc atgtgatata a