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LOCUS XM_044392739 4636 bp mRNA linear INV 09-DEC-2024 variant X1, mRNA. ACCESSION XM_044392739 VERSION XM_044392739.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044392739.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4636 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4636 /gene="spdi" /note="split discs; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108058175" CDS 503..3874 /gene="spdi" /codon_start=1 /product="cytospin-A" /protein_id="XP_044248674.1" /db_xref="GeneID:108058175" /translation="MIKLKSLFRRGQGTSSSNSSNSSHKQQQHSSNNNRQKSQSSTSL NTAHEQQQQQQQQQQQQQQHNNTAATTKFYAHQEAASYERGVDVGDEEALLLTNQQQQ QRRQQQQQLQQQQQQQQQQLQSNTLPQKKSKLKGQKQPKQLPVQQQHSNAAELQQQQQ QQPLMTSLAAVPQAAATNNSGSSNINNNNALAALQDGGAAAAAAAGFYQQLAAAASAT SANGSNTSADSPANAFPAAAAAVAVAAVAASSYQQQQQQQQQQQQQQQQQQLINNEQQ QQQLLEANNKMQELHKQLERLGSEQLQLETRITELLPYQSEVAKLKGDLVKMQSLQEK TQMEIGNLKYENESLRNRLRDVVNSPLSDAEKHQIIQDSQRLHSSAPASIALPSTNDG HDGTPCLTPDWDKQSSSSEISVACLQDKIIQMEETHYSTNEELQATLQELADLQTQLT DTQTENVRLAEDKDVLFQSLCRQTEKLNESRTQISTLKELLLRDTKQAASEVSASERE QKLLDLIKTSQEEREAVLLKQEEMGAELAELKQAREAGQQEQQRQRERIALLDSQLDA ANAERRQGEAQFSQAKDEISQRAIEISRLSTLLENARSKIEELEADLARGDKTDLSDV LDVARKEKDALEERVAELQDQCSRSQAELRRLREQLSGLTEECKVAKNNAKCAVSHLE YRLEQLQRDKDKIAGEWQALEERVAELQVQCKCHQEDKAQLQSLLSETQRHLGDVQLQ LNESECRLDQETQQRRREAEEWQQFQADLLMTVRVANDFKTEALSAREQLVLDNKTQK EKIRLLEQQLEKLTKQQLPQSETPQSVLSTVQREMEMATRRSKLSFSRQDSRLSVKTL IESIENNKAQGKADEAESHYSSTSSLNSGTPELGTTPIIFPPSSDWHESLRLPVLQSS NLHVNVGGNQGGSAGNGGGGSASTTKATLPLRDQQQQQQQTAITTPQSAIQSQIQNAS QPSTPATPSSAGSSSSSGLPFGNVSKSFIGGERKDPLNMLAKNGGSKRNALLKWCQNK TVGYRNIDITNFSSSWNDGLAFCAILHSYLPDRIPYDQLSQANKRRNFSLAFAAAESV GIGTTLNINDMCQIERPDWMQVMSYVTAIYKYFET" misc_feature <1349..2935 /gene="spdi" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:274008" misc_feature 3533..3868 /gene="spdi" /note="calponin homology (CH) domain found in the cytospin family; Region: CH_CYTS; cd21199" /db_xref="CDD:409048" misc_feature order(3557..3559,3569..3571,3719..3721,3725..3730, 3737..3742,3746..3748,3770..3796,3818..3820,3824..3829, 3833..3838,3845..3850,3857..3859) /gene="spdi" /note="putative actin binding site [polypeptide binding]; other site" /db_xref="CDD:409048" polyA_site 4636 /gene="spdi" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtttgcgttt gcagaaagca gaaacagaaa acgcgcgtcg ctttgtgcca gttcgtttgc 61 ttagtgccgt gttcccctcg attttcctaa tctaccttta atttttttgt attactgtct 121 tcccccccga actctgtgca acattaaagc aaagcgcgat aaccgataac cgaacgataa 181 acgaacactg cgaaaaatta ccttcaaaca ataataaaaa ataaaaaaaa acgacaacta 241 cattccgaga aatataaaac atagtaaaca aaatgcatca taaatgacgc attacaaaaa 301 agataaaaaa ccaaaaacat cactgataaa aaagttcagg gttcaatccc agtcgaaagt 361 cagtacaccg actataaata aaatgcacca tgcataatct taaataaccg aacaagaaat 421 tacacagaaa agaataagag aaattttaaa gttggcccgt tgatggttta cgttttgcaa 481 cgagaaagga taatccgaca agatgatcaa actgaaatcc ttgttccgca gaggacaggg 541 cacctccagc tccaattcct cgaattcgtc gcacaaacag cagcagcact cctccaacaa 601 caatcgccaa aagtcgcagt cgagcacctc attgaatacc gcccacgagc agcagcagca 661 gcagcaacaa cagcagcaac agcagcagca acacaacaac accgcagcaa caacaaaatt 721 ctacgcccac caggaggcgg ccagctacga aaggggtgtg gatgtgggcg atgaggaggc 781 gctgctgctg acaaaccaac agcagcaaca gcggcgacaa cagcaacagc agttgcaaca 841 gcagcagcag cagcagcagc agcagctaca gagcaacacc ttgccccaaa agaaatccaa 901 gctcaaggga caaaagcagc caaaacaatt gccagtgcag cagcaacaca gcaatgcagc 961 tgagctacag cagcaacagc aacagcaacc actgatgact tccctggcag ccgtgccgca 1021 ggcagcagca actaacaaca gcggcagcag caacatcaac aacaacaacg cattggccgc 1081 actgcaagat ggtggcgctg ctgccgccgc tgcagcaggt ttctatcagc aactagctgc 1141 agcagcatca gcaacatcgg ccaacggcag caacaccagt gccgatagtc cagccaacgc 1201 ttttcccgca gcagcagcag ccgttgctgt tgccgctgtg gcagccagca gctaccagca 1261 gcagcaacaa cagcaacagc agcaacaaca gcagcagcaa cagcagcaac ttatcaacaa 1321 cgaacagcag caacagcaac tcttagaggc taacaacaaa atgcaggagc tgcacaagca 1381 gctggagaga ttgggaagcg agcaactgca gctggagaca cgcatcacgg agctcctgcc 1441 ataccaaagc gaggtggcca aactgaaggg cgatctggtt aagatgcaga gtctacagga 1501 aaagacccag atggagattg gcaacctgaa atacgagaac gaatctctgc gcaatcggct 1561 gcgggacgtt gtaaactcac cgctttcgga tgcggagaag caccagatca tccaagactc 1621 gcagcggctg cacagttcgg cgcccgcctc gatagccctg cccagtacaa acgatggaca 1681 tgatggcaca ccctgcctca cgcccgactg ggacaagcag tcatcctcca gcgagatctc 1741 tgtagcctgc ctgcaggaca agatcattca aatggaggag acgcattact cgaccaacga 1801 ggagctgcag gcgacgctgc aggaattggc cgacttgcag acccagctga cggacacgca 1861 gacggagaat gtgcgcctcg ccgaggacaa ggatgtgctc ttccagtcgc tctgccggca 1921 gaccgagaag ctgaacgaat cgcgcacgca gataagcaca ctaaaggagc ttctcctgcg 1981 ggacaccaag caggctgcct ccgaggtcag tgcctcggag cgggagcaga agcttctgga 2041 tctgatcaag acatcgcagg aggagcgcga ggccgtgctg ctcaagcagg aggaaatggg 2101 cgctgagctg gccgagctga agcaggcgcg cgaagctggc cagcaggagc agcagcgtca 2161 gagggagagg attgcgctgc tcgactcgca gttggatgca gccaatgcgg agcggcggca 2221 gggagaggct cagttctcgc aggccaagga cgagatctcg cagcgagcca tcgaaataag 2281 tcgattgagc actctcctag agaatgctcg ctcgaagatc gaggagctgg aagccgattt 2341 ggccagaggc gataagacag acctgagcga tgtcctcgat gtggcccgca aggagaagga 2401 tgccctggag gagcgtgtgg ccgagctgca ggatcagtgt tcgcgcagtc aggccgagct 2461 aagaaggcta cgcgaacagc tctccgggct gacagaggag tgcaaggtgg ccaagaataa 2521 tgccaagtgc gccgtctccc atctcgaata tcgcttggag cagctgcaaa gggataagga 2581 caagatagcc ggcgaatggc aggcgctgga ggagcgagtg gccgagctgc aggtgcagtg 2641 caagtgtcac caggaggaca aggcccagct gcagtcgctg ctaagcgaaa cccagcgcca 2701 cctaggcgat gtccagctgc agctaaacga gtccgagtgc cggctcgacc aggagacgca 2761 gcagcggcgc cgggaggccg aggagtggca acagttccag gccgatctcc tcatgaccgt 2821 gcgcgtggcc aatgacttca agactgaggc gctcagcgcc cgggagcagc tggtgctcga 2881 caacaagacg cagaaggaga agatcagact gctagagcag cagctcgaga agctcactaa 2941 gcagcaactg ccgcagtcgg agactccgca gtcggtgctg tccactgtcc agcgcgagat 3001 ggagatggcc acgcggcgca gtaagctgag cttcagccga caggactcgc gactctccgt 3061 caaaacgctt atcgagagca tcgagaacaa caaggcgcaa ggcaaagccg acgaggcgga 3121 atcccactac agctccacgt ccagcctaaa cagcggcact ccggagctgg gcaccacgcc 3181 cattatcttt cccccctcca gtgattggca tgaaagcctt cgcctgcctg tgctgcagag 3241 cagcaatctg cacgtgaatg tgggcggcaa tcaaggagga tcagctggca atggaggagg 3301 aggatcagct agcactacca aagccacatt gccgctgcgg gatcaacagc agcagcagca 3361 gcagactgcg ataacaacgc cacagagtgc gatacagtcc cagatccaga atgcctccca 3421 gccctcgacg ccggccacgc ccagcagtgc cggcagcagc agcagcagtg ggctgccctt 3481 tggcaatgtc tcaaagtcct ttatcggcgg tgaacgcaag gatccactga acatgctggc 3541 gaagaacggc gggtcgaagc gcaacgccct gctgaagtgg tgccagaaca agacggtggg 3601 ctatcgcaac attgacatca ccaacttcag ctcgtcgtgg aacgatggct tggccttctg 3661 cgcgatcctg cactcgtact tgccggaccg cattccctac gatcaactga gtcaggccaa 3721 caagcggcgc aacttttcgc tggcattcgc ggctgccgag tctgtgggaa ttggcaccac 3781 cctgaacatt aatgacatgt gtcagattga acgacccgac tggatgcagg tgatgtccta 3841 tgtgacggct atctacaagt actttgagac ctagagagga actcgaggag catttgctgc 3901 cctccacttg ggctcctttg tgtagtagtt gtgtagggtt cgctttattt tcaatataca 3961 atttttgttt ttttttcctt ataaatactt tttttttttt ggttgttgtg tatattcagc 4021 atttccagga tggacagcaa agaaatcttt taacctagct tgtacgcttt ttttttctct 4081 tctagttttc tcaaaaaccc ctctctctgt tttagtgtgt ctacttctgc gtccatgttc 4141 ttgcccgtgt acagtggcca ctcaatggca acgcttctgt aaaatgcatt tgtttgtttt 4201 tcggttttac agacgacccc ttagcactaa gtttaagctt aaagtttaat tttaatggag 4261 cttcgaaggt tgttcaggtc catcaatcca gaggacaacg aagactcgcc cagccgtgtg 4321 tccactgtac atggataagg tagtttatta tttcgttttt tttttctatt gcctggtaca 4381 gagtttattt ttacacgcaa atcgatgatg gaggataaat tagcttgatt agctttgcga 4441 cgaagcatat aactatagag ataataagag gagatggtcc ggactttagc tttagcttat 4501 ctatatataa ttatttattc caactacatc agatcactaa tttaaacgca aacaaaatgt 4561 atttttttca acgattaatt ctacgatcta cccataaaga gcaaaaacgc tgcgaaaggc 4621 agtgaaacaa gtaaaa