Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_044392712 4321 bp mRNA linear INV 09-DEC-2024 X1, mRNA. ACCESSION XM_044392712 VERSION XM_044392712.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044392712.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4321 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4321 /gene="tty" /note="tweety; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108055908" CDS 1..2949 /gene="tty" /codon_start=1 /product="protein tweety isoform X1" /protein_id="XP_044248647.1" /db_xref="GeneID:108055908" /translation="MGDYHEFTDQYKVPVIAKLLHALPHYNITFHKINSTFRPNDEIY LESLGILGSVPAALLIVSLLGLLFYLMTRCCDRKPRPAHSITSLKVALSIVTVMCCAA IGLGLYGNDDLHNGLLEVLTAGRKVDNLVTTIRNQTHILENTLTNRIRPQLVELADIF DQPVSNQTALSKLFVSLNIVQGNVTLATNAASDIRRPLMGISMTHFLTRGDQWELIRW PGTVATLALLLVLCAVLLVGVARHSRCALILFSVCGLLAVTGSWLMSGLYLSSSVAVG DLCISPADFLVSTAPRDLPTNVLLHYTQCEPGHTNPFTQRLRESQNSLNNARSAMATV MKISLVLFKSSGLQPKLGAVNADLNSSERLLTQLTALVDCKAVHHNFLAAARGLCEGG LLGLVLMLIASFIAAILLTIMVWVDSHTWIYIRKRNDYAQVDEPSYISHPAPQNHQQM MNAARTLPRNHNGHFSPPVISGSHTLQHPSKRQQHEMMAHAHIQQNMRAMGTHTLGRL PSHNHSPTHMTGPNNAAAVAAAANAAANMPPTTQAAQQQQQQQQQQQQQQQQQQQQQL GGPQPIYCHHPHQHPHPHPHPHQHPHSHSAAAVAAAVQHQHAIYHQQQQQAAQQQQQQ YGTYTTAAHHGPHHLGPGQSQIYQQIPAHLAPQLAAAAANGNPHSIYQPLVAVSQGSI YVSNLATMRRQNSQGGPQIPAHQHPPSLHQQQQQQPPPPSQQQQQLHQLKSPQQHQPH MQQQHQQQQQQHHQQQQQHHQQQQQQQNESDVIPISTAMDGAIYDRDKQIYKCSTLRQ GGKFDPKYKPSILNCPLPEIPKDAEQPKVESIYEQRQQAHHQNYSKTLQRPPMKLPPQ MKAIPPPRIGTPTSPPPPVAQSLSEANGGVPSGLQNGGGGGGGGNANEDTSLPPPPLE AQPEATKGRMGPGGPGGPAANGKVLHNGGGGGGGGGVGGGGGAVDDDDDLPPPPPAIT DESNYAVTEL" misc_feature 28..1287 /gene="tty" /note="N-terminal domain of the protein encoded by the Drosophila tweety gene and related proteins, a family of chloride ion channels; Region: Tweety_N; cd07912" /db_xref="CDD:143653" misc_feature order(1123..1125,1132..1134) /gene="tty" /note="putative pore region [active]" /db_xref="CDD:143653" ORIGIN 1 atgggcgact atcacgagtt cacggaccag tacaaggtgc cggtgatagc gaagctactc 61 cacgccctgc cccactacaa catcacgttc cacaagatca acagcacgtt ccggcccaac 121 gatgagatct acctggagag tctgggcatt ttgggctccg ttccggccgc cctgctgatc 181 gtctcgctgc tgggactgct cttctatctg atgacccgct gctgcgaccg gaagccccgc 241 ccggcccact cgatcaccag cctgaaggtg gccctctcca tcgtgacggt catgtgctgt 301 gcggccatcg gactcgggct atatggcaac gatgatctgc acaacggact gctcgaggtg 361 ctgacggcgg gcaggaaggt ggacaatctg gtcacgacca tacgcaatca gacgcacatc 421 ctggagaaca cgctaacgaa tcgcattcga ccgcagctgg tggagctggc ggatatcttc 481 gatcagcccg tctcgaatca aacggccctc tccaagctct tcgtttcgct caatattgtc 541 cagggaaatg ttacgctagc cacgaatgcg gccagcgata tccgacgacc cctgatgggc 601 atctccatga cgcacttttt gacgcgcggc gatcaatggg aactgatccg ctggccaggc 661 acggtggcca ccttggccct gctcctcgtc ctgtgcgccg tcctgctggt gggcgtggcc 721 cggcactcgc gctgcgccct aatcctgttc agcgtctgcg gcctgctggc cgtcaccggt 781 tcgtggctga tgtccggcct gtatctctcg tcctcggtgg ccgtcggcga tctgtgcatc 841 tcgccggcgg acttcctcgt ctcgacggct ccgcgtgacc tgcccaccaa tgtcctgctg 901 cactacaccc aatgcgagcc ggggcacacg aatccgttta cccagcgcct gagggaatcg 961 cagaattcgc tgaacaatgc acgcagtgcc atggccacgg tgatgaagat atccctagtg 1021 ttgtttaaat cgtcgggttt gcaacccaag ctgggtgccg tgaatgcgga tctgaatagc 1081 agcgagcggc tgttgaccca actgaccgca ctggtggact gcaaggcggt gcatcacaat 1141 ttcctggccg ccgcccgggg attgtgcgag ggcggactgc tgggattggt cctcatgctg 1201 atagccagct tcattgcggc cattctgctg acgattatgg tctgggtgga ctcgcacacg 1261 tggatctaca tcaggaagcg caatgactac gcccaggtgg atgaaccgtc gtatatctcg 1321 catccggcac cgcagaatca ccagcagatg atgaatgccg cccggacgct gccgcgaaat 1381 cataatgggc acttcagtcc gccggtgatc agcggctccc acacgctcca gcatcccagc 1441 aagcggcagc agcacgagat gatggcccac gcccacatcc agcagaacat gcgcgccatg 1501 ggcacccaca cgctgggccg gctgccgtcg cacaaccaca gccccaccca catgaccggt 1561 cccaataatg cagcagcagt cgcagcagca gccaatgccg ccgccaatat gccgccgacc 1621 acgcaggccg cccagcagca acaacagcag cagcagcagc agcaacagca gcaacagcag 1681 cagcagcaac agcaattggg aggaccacag cccatctatt gccatcatcc gcaccagcat 1741 ccgcatcccc atccccatcc gcaccagcat ccgcactcgc attcggccgc cgccgttgcg 1801 gctgcagtgc agcatcagca cgcgatctac catcagcagc agcagcaggc ggcgcagcag 1861 cagcagcagc aatatggcac ctacacgacg gccgcccatc atggtccgca tcatttgggg 1921 ccgggacaga gccagatata ccagcagata ccggcccatt tggcgccaca actggcggcg 1981 gcggcggcca atgggaatcc gcactccatc taccagccgc tcgttgccgt cagccagggc 2041 tccatctatg tatccaattt ggccacgatg cgtcgccaga atagccaggg tggtccgcag 2101 ataccggcgc atcagcatcc acccagtttg catcagcagc agcagcagca gccaccgccg 2161 ccttcgcagc agcaacagca gttgcatcag ctaaagtcac cgcagcaaca tcagccacat 2221 atgcagcagc aacaccagca acagcagcag caacatcacc agcagcaaca gcaacatcac 2281 cagcagcagc agcaacagca aaacgaatcg gatgtcatac ccattagcac ggccatggat 2341 ggggccattt atgatcggga caagcagata tacaagtgct ccactctgcg gcagggcggc 2401 aagttcgatc ccaagtacaa gccatcgata ctcaattgtc cgctgccgga gatccccaag 2461 gatgcggagc agcccaaggt ggagtccatc tacgagcagc gccagcaggc ccaccaccag 2521 aactactcca agactctgca gcgtccgccg atgaaattgc cgccgcagat gaaggcgatt 2581 ccgccgccgc gcattggaac gcccacatcg ccgccaccgc cggtcgccca gtcgctgagc 2641 gaggccaatg gaggagtacc ctcgggcctc cagaatggcg gaggcggagg aggaggagga 2701 aacgccaacg aggacacctc gctgccgccg ccgccgctgg aggcgcagcc ggaggcgaca 2761 aagggtcgaa tggggcccgg aggaccagga ggacccgcag ccaatggcaa ggtcctgcac 2821 aacggaggcg gaggaggagg tggcggaggt gttgggggcg gcggaggagc ggtggacgat 2881 gatgatgatc tgccgccgcc gccgccagcg ataaccgacg aaagcaacta tgcggttacg 2941 gagctgtaag atggataata tccggaaaaa ccgaagaaaa ataccagaaa aacaggcgga 3001 aaaaaaaaac aagacaggaa ttggtcagga cttgggatta gcggggcgtc ttcctagaat 3061 tcgaatgtag gatagatata tatcgaggaa accaggcgga atgggactaa ggattgctgg 3121 agcggcgagt gttccttctt gatttgttgc atttaacgta tcgtatcgta tcgtaatcgt 3181 atcctagacc ggaatcctgc ttttcgactt ttgtacatac tatatacact gaactctata 3241 tccgagcaac ccaaaaaaaa agagaaggga tgcagcgggt ataaacacac agatactaga 3301 cacgcacaga cagacagacg gaaggacata tgtaacatat atcagcgatc tattacttat 3361 atataaatat atatatatat atatccattt aggacacggt tattcctttt tgataatagc 3421 atatttttac caattttaat gcgctaaatt gtcaagaaga aacaatttta tgggggctaa 3481 cttatttgta ttatacaaca ttaatctata aaaagtatat atataaattg tatatcctct 3541 acaaccgcaa aaacggaaaa caaaaacgaa aaaacgatac catactggaa acgaaagacc 3601 gacacttgaa cctaaaaacc aacaaccacc aaaaataatg aaaatcgaat tcggatcgta 3661 ggccataagt ttcagaatcg aactgtagta gaaacgttag caaagatttt taggcacatg 3721 tcgggagtca attttatgta gacaacgggc aactgaatgg atgggcgaag gggcgtggca 3781 ggttctaatt tggttcatgg atatttctta cttataaaca gggttgctct gaaacggttt 3841 gctccattaa aaatattttt atcgattttc gaactcgaat tttcgaattt atcataatta 3901 ccttttcttc agctttcctt tatagtttaa ttttttttct ttgtaatttc tgcatatgtg 3961 atatatattc caaactctag tcattccaat tttcgagata ttttacattg tatgctcaag 4021 ttacagaggt ttttaataat tattctttat aatcatcatt tgcttacaac acttttaaag 4081 gcctaagttc ctgactgatt gcatttatac ctactcctaa aataaatgtt tacaaaatcg 4141 aataatatta atggcggcga tgaggagcca ttccttattt tatgttataa gaaaatcgaa 4201 ccgatatgac ctcgagtatg ccaaacttac attagttaat ggacgattat tttttaagca 4261 ctccaaagac acgtactgct attgttaaga ccccctcatc aaagaaaatg gaataggatc 4321 a