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LOCUS XM_044392694 3739 bp mRNA linear INV 09-DEC-2024 (LOC108065693), transcript variant X5, mRNA. ACCESSION XM_044392694 VERSION XM_044392694.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044392694.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3739 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3739 /gene="LOC108065693" /note="autotransporter adhesin BpaC; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108065693" CDS 706..3435 /gene="LOC108065693" /codon_start=1 /product="uncharacterized transmembrane protein DDB_G0289901 isoform X4" /protein_id="XP_044248629.1" /db_xref="GeneID:108065693" /translation="MMTMTAASASISASTSASASITNSASTDCSSSMQGSTTSSASSD VMTLTTTAASSWCAIPASSRLRVLRLVRPHQRRLLVGGPERGSTYGFAVRGGREHGTG FFVSHVEHGGEAQLKGLRIGDQILRINGFRLDDAVHKEFIQLVAGQDRVTLKVRGVGM LPVRDQPEERLSWSVVKLPSVSGTPSESSFKGERRGGASRDISVVLHVAPRTKLGLGI CKGPEWKPGIFVQFTKERSVAREAGLRPGDQILSVNSIDFSDVLFSEAVAVMKSSSKL DMVVRTAAGCDLFPGESSGYNSSASSVTGDQSPCWADAKSKRLTAVREESAGGGSGSG NGSTNWSQGVEVHKQMNKTIIKLTENGTSINNTYIASNSVSGSGSGSGSSASGTSGRS LQSQSNPSRNSTTMKRSHLRPVNTAGLAGGSGSGLGGVIAAPAPPPPAINEGACTSGS AGSSLSSAITEELKKRKEQQQQQQHQQRNNRDRDRDRDENGNVDRQLAGHNGNGNGGG NGNGGGNGSGSGGHRSSGGQVSHRQRANVAGVAATLQSSERISNLGGGGGGGGGGGGA GGSNGAGGDQHTALMDEFKRAHQRMFRNGFHESEHKLSSLEENSLGNRSHYGRKMSLL RVKNGRGGGGGEGGEGSGVMPTMRPVSMGRPLVTMSTYQERVETLKRTSIMPDESCYR NSINSNGFSSNRSNSNGSSNVNSNPSNSNSSDTSNNNRLQPQNGFSPANGNGSPELPP PPPQFANPQPKQMPPQQLKLITGNGAANGNGSGGGGGIGLGNGSLAKVKQPMSPMRSA SISVGGFRPPATPQPDYDAVQLRSPTGTGSGSGSGSGSTSQQQRRTLRLGTVTIGEYG DPRTTATGKRETLRKTNGEPGSNGILKNGTNRSSASFNHGSSHQPEKSIKFGN" misc_feature 931..1182 /gene="LOC108065693" /note="PDZ domain 1 of harmonin isoforms a, b, and c, and related domains; Region: PDZ1_harmonin; cd06737" /db_xref="CDD:467219" misc_feature order(967..987,1021..1023,1030..1032,1117..1119, 1129..1131,1138..1143) /gene="LOC108065693" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467219" misc_feature 1303..1548 /gene="LOC108065693" /note="canonical PDZ domain; Region: PDZ_canonical; cl49608" /db_xref="CDD:483948" misc_feature order(1342..1362,1396..1398,1405..1407,1492..1494, 1504..1506,1513..1518) /gene="LOC108065693" /note="peptide binding site [polypeptide binding]; other site" /db_xref="CDD:467153" polyA_site 3739 /gene="LOC108065693" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtaaaataca agccaccaaa aagctcagag tattcaaaat actggtaacc gattctaatt 61 tcgaacatct ggcagcgtcg ccgaaaaagc tttggcggtc ggaaaactgg tttggtactt 121 ttttcccggc tgcgcggtca ctttgacgac ggctccaatt tatttgccgc ctcaatttgt 181 cgtcgcctct cgcgagattc acgtcgtcag tgcggaaaag cccgttccca gaacaagtac 241 ctcccacata tttcgttttc catttttccg aaaagaaaaa caaacggaaa atcgcgatcg 301 ttgccggctt aaaaaataaa tatatcgaag cgcgtgtgtt ttttggcatt tgtttctttt 361 ttttctggag tgcactcgat tttggggcca gcaaaagtgc tgaaagtgct cgcgggctca 421 caaaacgctg ctgcacctgt ctcacctgag cgcttcaagc cacaaaagtg taaagtgcag 481 cgcgactctt tgctgttccg tcgtttttat ttatttgttt tttgcttcgc gatttcgaga 541 tccccgagat tcagcaagaa ttctgcgagc gtaagcgagt gttttgatac tgctgccgcg 601 ctctaattgc caggtttcgt gtgtagaatt cttcggccgc ttctttttct tcttcttggg 661 acgcccgcac cgcaaatgag ctgcctgtga agaagcccca acaaaatgat gacgatgaca 721 gcagcctcgg cctcgatatc cgcatccaca tccgcatcgg catcgataac aaattcggcg 781 tcgacggact gcagcagcag catgcaggga tcgacgacca gctcggcgtc cagcgatgtg 841 atgaccctga cgaccacggc ggcctcctcg tggtgcgcca ttccggcgag ctcccgcctg 901 cgggtcctgc gcctggtcag gcctcaccag cggcgtctgc tggtcggcgg accggagagg 961 ggcagcacct acggattcgc ggtgcgcggc ggtagggagc acggcaccgg tttctttgtg 1021 tcccacgtgg agcacggcgg cgaggcgcag ttgaagggtc tgcggattgg cgaccagatc 1081 ctgcggatca acggctttcg cctggacgat gccgtgcaca aggagttcat ccaactggtg 1141 gctggccagg atcgggtcac gctgaaggtg cgcggcgtgg gaatgctgcc agtgagggac 1201 caaccggagg agcgtttgtc ctggagcgtg gtcaagttgc ccagtgtgag tggcactccc 1261 tcggagagtt ccttcaaggg cgagcgacgc ggcggcgcca gccgggacat cagtgtggtg 1321 ctccatgtgg cgcccaggac gaagctgggc ctgggcattt gcaagggtcc cgaatggaag 1381 cccggcatct ttgtgcagtt caccaaggag cggagtgtcg caagggaagc gggtctgcgc 1441 ccgggtgacc agatactcag cgtgaacagc atcgacttct ccgatgtgct cttcagcgag 1501 gcggtggccg tgatgaagag cagcagcaag ctggacatgg tggtgcgcac ggcggcggga 1561 tgtgacctct tcccaggcga atcgagtggc tacaacagct cggccagctc ggtgacgggc 1621 gatcagagtc cctgctgggc ggatgccaag tccaagagat tgacggcggt cagggaggag 1681 tccgccggag gaggatcagg atcgggaaat ggtagcacca actggtcgca gggcgtcgag 1741 gtgcacaagc agatgaacaa gaccatcatc aagctgacgg agaatggtac ctccataaac 1801 aacacctaca tagccagtaa ttccgtttcc ggttctggtt ctggttctgg ttcctccgcc 1861 agcggaactt ccggtcgcag cctgcaatcg caatcgaatc cttcccgcaa ttcaactacc 1921 atgaagcgca gccacctaag gccagttaat actgcgggat tagcaggcgg atcaggatcg 1981 ggattaggag gagtcattgc tgcacctgct ccaccgccac cggccatcaa tgagggagcc 2041 tgtaccagcg gctcagctgg cagcagtctc tccagtgcca taaccgagga gctcaagaag 2101 cgcaaagagc agcagcagca gcagcaacat cagcagcgca acaatcgcga tcgagataga 2161 gatcgagatg aaaatggaaa cgtggatcgt cagctggcgg ggcacaatgg aaatggaaat 2221 ggaggtggaa atggaaatgg aggtggaaat ggaagtggaa gtggaggcca ccgcagctcc 2281 ggcggacaag tgtcgcatcg ccagcgggcg aatgttgctg gcgtggctgc aacattgcag 2341 agcagcgaac gcatcagcaa tttgggaggc ggcggcggag gaggaggagg aggaggagga 2401 gcgggtggat ccaatggagc tggcggagat cagcacacgg cgctgatgga cgaattcaag 2461 cgggcgcacc agcgaatgtt caggaacggg ttccatgaga gcgagcacaa gttgtccagt 2521 cttgaagaga attcgctggg gaatagatcg cattacggcc ggaaaatgag tttgttgcgg 2581 gtgaaaaacg ggagaggagg cggtggaggg gaaggcggag aggggtcagg ggtcatgccc 2641 acaatgcgac ccgtgagcat gggtcgaccc ctggtgacca tgtccaccta tcaggagcgc 2701 gttgaaacgc tgaaacgcac ctcgattatg cccgatgaga gctgttatcg gaatagtatc 2761 aacagcaacg gcttcagcag caacaggagc aacagcaacg gcagcagcaa cgtcaacagc 2821 aacccgagca acagcaacag cagcgacacg agcaacaata atcgcctgca gccacaaaac 2881 ggatttagtc cggcgaacgg caatggatcg ccggaacttc cgccaccgcc accacagttc 2941 gccaatcccc agccaaagca gatgccgccc cagcagctca agctgatcac cggaaatgga 3001 gcggcgaacg gaaacggaag tggaggtgga ggtgggatag gactgggcaa cggcagcttg 3061 gccaaggtca agcagcccat gtcgcccatg cgcagtgcca gcatcagtgt gggcggattc 3121 cggccaccag ccacgcccca gcccgactac gatgcagtcc aactgagatc gcccacggga 3181 acaggatcgg gatcgggatc aggatcggga tccacgagtc agcagcagag aagaaccctg 3241 cgattgggca cggtgaccat cggggagtac ggagatccga ggacgacggc gacgggaaag 3301 cgggaaacgc tgcgcaaaac gaacggggag ccgggctcca atgggatcct aaagaacgga 3361 accaaccgga gcagcgccag cttcaatcac ggctcctccc accagccgga aaagtccatc 3421 aagttcggca actgattgat ataacccgaa tatatatata tttacctttg tgcaatatgc 3481 tcgatgattg aggagagtac aaacaaatcg gacgtgcagc ggctttccat atgcatatac 3541 tacatatcta tcatatccat tatcttatat catttttttt ttttgcttac ttctaacttt 3601 tattgtattt ttttgaaacg atttgttgga aatattctat cactagttgc tattatttaa 3661 cgaacactgt aaataaacca ctggcgagtg tgtgtgcgag tgtttccaat aaagcatata 3721 tatatatgta tgtacctta