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LOCUS XM_044392542 2910 bp mRNA linear INV 09-DEC-2024 variant X3, mRNA. ACCESSION XM_044392542 VERSION XM_044392542.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_044392542.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2910 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2910 /gene="RunxA" /note="Runt related A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108056789" CDS 964..2910 /gene="RunxA" /codon_start=1 /product="runt-related transcription factor 3 isoform X2" /protein_id="XP_044248477.1" /db_xref="GeneID:108056789" /translation="MHLTTTSSNSTASNANNNNNNTTNNNNNTSSNNNNNTSNTNGSS NNNNNTSGGNSSGNNNSNNTEQNTPPTPAQLLNEAYTKMTSDILAERTLGDFLTEHPG ELIRTSSPLFVCTVLPPHWRSNKTLPVAFKVVSLGDIMDGTMVTVRAGNDENYCAELR NCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTITVSTNPPHIATYNKAIKVTVDGPREP RSKTRQQQQFHFAFGQRPFHFSTDPLSGFRMPPIGNCQSASNTHWGYGSAASAYSPYL ASSGLSSCTTPTSAQFNNPALGFTCSSNDQSNNQDFGGATNRDCVPMLPDSTASDLDQ HLSSLVGSTSGQMTHHSLLGAGGQTSISSTVNGGASGGGGSGAGGAGAAGAGSGGAAG GNSILVPRYHTNASNEYNVHSSQNGPRSLSDSSQAESPVQEDLLTTNTPNLGSTAGGG GGGGGGAGSASAGGAAGSGAPPSGAGASVVGNPSMLGANQNFPGIVNQAQHSAASAYG GGGSGVVGGGPPTAGCNGSLYPVLPASLLYSQLYTAANQSAHGFHSHTLPAHASPNSS VHGELQSVMDHISNVGVRQQHHNIMAGGGVTHPGDLTLIGNCGASVRNIEDGGNSNRQ VAALAAHRGHHNPTDNGGSVWRPY" misc_feature 1240..1626 /gene="RunxA" /note="Runt domain; Region: Runt; pfam00853" /db_xref="CDD:459963" ORIGIN 1 accaagcgac gctttttaac tgacgcgacg tcgacggccg gagccccacg aaggcagcga 61 cgccggcaga gcggcgacga cgcccccatc gccgctttat taaccgcaag tttgcgggag 121 gcaaacaaaa gagagcgaga tcttgcggcg agatagagag gaagagcgcc gaaaagagag 181 cgcggcgaag aatttaaaca gtcatgacgg cacatgttct ggctcgcaca gtgggccgca 241 gggccagaag tcggagaaaa ccaaaaataa taataataag ttttctggtc gtgccaggcg 301 tcaaccggct aaatgtgcag cccataaaca ttaaaaacaa taatacaaca aaaaaaagag 361 aaaaaagaat aacaaccgtg actggggtct aatcaatttg ttgttgcttc gttgcggttg 421 accaaaccag ctggccactc acttggaacc gaaattcgct ggccatcttg ggcctcctcg 481 caagactccg aagtttagcc aaccaaccag atccaaaaat ccgatgcgga ttctctcaac 541 cgaaagcgcg ttcaaccgaa atgaactgct tagtgtgacc aggcccccga aaatgggtgt 601 gtttgaggtg gccataagtg cggaaacttc acttatggtg accccaaaaa taaaatgtaa 661 tttcgagaga ccataaatga gtggatcgta aacgaggctt tcagggagtc ttgtgggtga 721 atcctgaatt attgattgtt ttccaaggcg gtgcttgaaa aggacgacaa aattgtgcgc 781 ctaaaaaaag tgcaggctca cgctcaaggg caactggagc agttcgagca gcagcaacag 841 caagagcaac agcaacatca gcagcagcaa cacctgcagc agcagcaaca actgttgcaa 901 caacagcagc agcaacaaca ctatcacagc tacaccgcca atagcaacaa caacaattac 961 aaaatgcatt taacaacgac atcgagcaat tcgacggcat ctaatgccaa caacaataac 1021 aacaacacaa ccaacaacaa taataatacc agcagcaaca acaacaacaa cacgagcaac 1081 acgaatggca gcagcaacaa caacaacaac acgagcggtg gaaacagtag tggaaataat 1141 aacagcaaca acacggagca aaatacaccg ccaacgcccg cgcaactttt aaacgaggcc 1201 tacacgaaaa tgacctcgga cattctggcc gagcgaacgc tgggcgactt cctcaccgaa 1261 catccaggcg agctgatccg caccagcagt ccgctcttcg tctgcacagt gctgccgccc 1321 cattggcgga gcaacaagac gctgccggtg gccttcaagg tcgtctcgct gggcgacatc 1381 atggacggaa cgatggtcac cgtgcgggcg ggcaacgatg agaactactg tgcggagctg 1441 cgcaactgca cggcggtgat gaagaaccag gtggccaagt tcaacgatct gcggtttgtg 1501 ggaaggagcg gcagagggaa gagcttcacg ctaaccatca ccgtgtcaac gaatccaccg 1561 cacatagcca cctacaacaa ggcgatcaaa gtgactgtcg atgggccacg cgagccccgt 1621 tccaagacaa gacagcaaca gcagttccac ttcgcctttg gccaaagacc cttccacttc 1681 tccacggatc cactttccgg cttccggatg ccgcccatcg gcaattgtca gagtgccagc 1741 aacacgcact ggggctatgg atcggctgcc tcagcgtatt cgccgtattt ggccagcagc 1801 ggcttatcct cctgcaccac gcccacttcc gcccagttca acaatccggc cctgggcttc 1861 acctgctcct ccaacgatca gagcaacaac caggacttcg gaggagccac caatcgcgac 1921 tgcgttccaa tgctgcccga ctcgacggcc agcgatctgg accagcacct gagcagcctg 1981 gtgggctcga ccagcggcca gatgacgcac cacagcctgc tgggtgccgg cggccagacg 2041 tcgatctcgt cgacggtcaa cggaggggcc agcggcggcg gtggcagcgg tgccggcgga 2101 gcaggtgccg ccggagcggg cagcggcgga gcggcgggcg gcaattcgat cctggtgccc 2161 cgctaccaca ccaatgcgag caacgagtac aatgtgcatt ccagccagaa tggaccgcgc 2221 agcctctcgg acagctccca ggcggaatcg ccggtgcagg aggacctgct gaccaccaat 2281 accccgaatc tgggcagcac ggcgggcgga ggaggaggcg gtggcggtgg agcgggcagc 2341 gcatcggcgg gcggagccgc cggcagtgga gcgcctccct cgggagcagg tgcctccgtc 2401 gtgggcaacc cctcgatgct gggtgccaat cagaatttcc ccggcatcgt caatcaggcc 2461 cagcactcgg ccgcctcggc ctacggaggc ggtggctccg gtgtggtggg cggaggcccc 2521 cccaccgccg gctgcaacgg ctccctgtat cccgtgctgc cagccagcct gctatactcc 2581 cagctctaca cggcggccaa ccagtccgcc cacggcttcc attcgcacac cctgcccgcc 2641 cacgcctccc cgaactcctc ggtccacggg gagctgcaga gcgtcatgga tcacatcagc 2701 aatgtgggag tgaggcagca gcatcacaac atcatggccg gcgggggggt cacacatccc 2761 ggggatctga cgctgatcgg gaactgcggg gcctcggtga ggaatatcga ggatgggggg 2821 aatagcaatc ggcaggtggc cgccttagct gcccatcgcg gccaccacaa tcccaccgac 2881 aatgggggca gcgtttggag gccctattga