Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_041591994 3285 bp mRNA linear INV 14-MAY-2021 ACCESSION XM_041591994 VERSION XM_041591994.1 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq; corrected model. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-138 JAECWW010000165.1 1243703-1243840 139-550 JAECWW010000165.1 1245064-1245475 551-933 JAECWW010000165.1 1266534-1266916 934-1099 JAECWW010000165.1 1267014-1267179 1100-3285 JAECWW010000165.1 1267181-1269366 FEATURES Location/Qualifiers source 1..3285 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3285 /gene="LOC111074803" /note="The sequence of the model RefSeq transcript was modified relative to its source genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns" /db_xref="GeneID:111074803" CDS 470..1888 /gene="LOC111074803" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon" /codon_start=1 /product="LOW QUALITY PROTEIN: protein TIS11" /protein_id="XP_041447928.1" /db_xref="GeneID:111074803" /translation="MSATIVQKSTATVGNSHYFECGDLFQTVASDHHQPQQHQQQQQQ QLQLQQQTADQLVLDINMEQSQSQQHRLHGALTRTISQPAQQRHPLHQQQQQMQQQQI QQQQQQHQQQQQQPQGVASLVTIIENLGNMNLHRKLERTQSEPLPQQPMNISRYKTEL CRPFEEAGECKYGEKCQFAHGFHELRNLQRHPKYKTEYCRTFHSVGFCPYGPRCHFVH NADEARAQQQAAAQAAKSGQQQQQQQQQQGQGQGQQQQQPQQQQQQQQQGFQKPSQLG SQTSISQSISISQSPFFMPLSPPLSMSTGSDRESPTGSLSLSPTNSLTSFPFHDAMPL QHGGYLCMAVGSSGGKHGTGGGSSASSTSSSSGLGLGLGMAMAMGPATPPESPNVPIS PVQTPPPYEPSTPSSSSSSSMSGGSGSGSGSGMGGQAKQVLQKSMSTPMQQEEMPRLP VFNRLSSAVEEYQQKLQSILLP" misc_feature <935..>1123 /gene="LOC111074803" /note="CCCH-type Zn-finger protein [General function prediction only]; Region: CTH1; COG5063" /db_xref="CDD:227395" ORIGIN 1 gcgttcaaat tttaaaaaac tgtcgttgac aacggacgtg cttgtgcttg tctctgctgt 61 tgttttgccg gaaaacggaa aaccaagtgc aaagtagtgt gccaccgcca ggatcttcat 121 tcggcgcccg caatcaaact gtcttttttt ttgtgtgtaa aatgcaatac gcgaaaaata 181 gataacgcaa caataaaatt atagttcaag tgcaaaaaat aaaaaaaaaa aaacatctaa 241 tttcaaacgc aattcaatcc cccaccaccc gtaaaaccgt aacaatcaaa agaaagaaaa 301 agagaatttt gtcgtcttgt ccagtggaaa cgaatcatca agtccgaaaa caacaaatat 361 agttcaatca gaaggctggg agaaaaaaaa aaaacaacaa aactatagaa atagcaacaa 421 ggacaaataa acagcaggag acgcagcagc gcaggccccc aacaacaaaa tgtctgccac 481 aatagtgcag aaatcgacag caacagtcgg caattcgcat tactttgaat gcggcgactt 541 attccagacg gtggccagcg atcatcacca gccgcagcag caccagcaac agcagcagca 601 gcagcttcag cttcagcagc agaccgcgga tcagctcgtc ctggatatca acatggagca 661 gtcacagtca cagcagcacc gcctccatgg tgccctcaca cgcaccatct cacagccggc 721 tcaacagcgc caccctttgc accagcagca gcagcagatg caacagcaac agatccaaca 781 acaacaacag cagcatcaac agcagcagca gcagccgcag ggtgttgcct ccctggtgac 841 gatcattgag aatctgggga acatgaatct gcaccgcaag ctcgagcgca cacagtccga 901 gccgctgccc cagcagccca tgaacatatc tcgctacaag acggagctct gccgcccgtt 961 cgaggaggcc ggcgagtgca agtacggaga gaagtgccag ttcgcgcacg gcttccacga 1021 gctgcgcaac ctgcagcgcc atcccaagta caagacggag tactgtcgca cattccatag 1081 cgtcggattc tgcccctacg ggccgcgctg ccactttgtg cacaacgcag acgaggcccg 1141 cgcccagcag caggccgcag cccaggcggc taagtcggga cagcagcagc aacagcaaca 1201 gcagcagcaa ggacagggac agggacaaca acagcagcag ccgcagcagc agcagcagca 1261 gcagcagcag ggcttccaga agccatcaca gctcggaagc cagacgagca tcagtcagag 1321 catcagcatc agccagagcc cattcttcat gccgctgagc ccgccgctga gcatgagcac 1381 cggctcggac cgggagtcgc ccaccgggtc gctgtcgctc agcccgacca actcgctgac 1441 gagcttcccc tttcacgatg ccatgccgct gcagcacggc ggctacctct gcatggccgt 1501 tggctcctct ggcggcaagc acggcaccgg cggcggcagc tccgcctcat ccacatcctc 1561 ttcctcgggc ctgggactgg gtctgggcat ggccatggcc atgggaccgg ccacgccgcc 1621 agaaagcccc aatgtgccca tctcgccggt gcaaacacca ccaccgtacg agcccagcac 1681 cccgagcagc agcagcagca gcagcatgag cggcggcagc ggaagtggca gcggaagcgg 1741 aatgggagga caggccaagc aggtgctgca aaagagcatg agcacgccga tgcagcagga 1801 ggagatgccg cgtctgcccg tcttcaaccg actgagctcc gccgtggagg aataccagca 1861 gaagctgcag tccatcctgc tgccctaagc agcaccagca ccaagtgcct acactcaccc 1921 tcgccccaaa aaacaatcat ccaacaacac tgtcccgcat ccatctaatc attcaatcag 1981 tcaccaacag caaccttgac aaaatctcaa caacgactac tccgaaccat tgtagacttg 2041 atcccctggc tgctccctga ttgcccggga taaacttcgc agccacctat ccaccaggac 2101 ttaaaaattc cccctaacct aattcctaat ccaaacaatc aagcaacaac gatgatcttg 2161 accaacgaac agcacagcaa tgtactcttc ttgcaactgc agcacaaaga gctgcagagt 2221 gttgctcaaa aacacaccac aaaacaaaag aaaacaaaga caattgaaac gaaatctgat 2281 cttagagcac acaaacattt gtatacatgc acgcgactgt atacagatcc ttgggtcttg 2341 catttatagg acctattcgc ggggacctta ccgcacacac ccattagaac ccaggcaatt 2401 tccaaattgc tcttgtttaa tatttatgca aacaatttga ctagttttta tatgcgatcg 2461 atcgtatttg agaatcgatt atcaatcgat ccgattaatg taacgaaaat ccaaaacata 2521 tatattcaaa tatatatgta cacgcatgtg catatacatg tatatatata tatatatata 2581 tatttatata ttcgatattt aacgttggac cgtaacgttg tcttccaatc caatccaaaa 2641 cggatcgtcg agagccgata aggttcttta atttattatc ctgctaaatt atgtagtagc 2701 aacgttgtgt acatatgcga tatgagttga tatttcttga taaactttat ataaattata 2761 caatacttac atttacgaga ctacgataat gattacgata atgatataac gataacgcca 2821 atgccaatcc actggctatc gctattatcg atgatatacc tcttgcagtc cactgcaatg 2881 caacaaaaca aaacaaaaaa acaaagcaaa acaaaaacaa aaacgaaaag acccaacccc 2941 aatcacaatc acaattaaaa gaaaagacaa acaagaacag aaccgaacag aaacctgtcg 3001 attgttcatc aaaagactat cgatatcgaa cgaacactac tctcgattcg attcgattca 3061 tgttaatgat atcttattga taaatttttg tgacgcgaac ggaaatgctg attttttaga 3121 cacacataat ttattttcac ataaatatac ataccagata ttttatatgc gattaatgtt 3181 aataatttat gaaaccaacc cgctcacaca tacaacagat ttatacacac aaacacacat 3241 acacttacac acagaacacg gacacacaca cacactcaca caaca