PREDICTED: Drosophila obscura protein TIS11 (LOC111074803), mRNA.
LOCUS XM_041591994 3285 bp mRNA linear INV 14-MAY-2021
ACCESSION XM_041591994
VERSION XM_041591994.1
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq; corrected model.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
frameshifts :: corrected 1 indel
##RefSeq-Attributes-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-138 JAECWW010000165.1 1243703-1243840
139-550 JAECWW010000165.1 1245064-1245475
551-933 JAECWW010000165.1 1266534-1266916
934-1099 JAECWW010000165.1 1267014-1267179
1100-3285 JAECWW010000165.1 1267181-1269366
FEATURES Location/Qualifiers
source 1..3285
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..3285
/gene="LOC111074803"
/note="The sequence of the model RefSeq transcript was
modified relative to its source genomic sequence to
represent the inferred CDS: deleted 1 base in 1 codon;
Derived by automated computational analysis using gene
prediction method: Gnomon. Supporting evidence includes
similarity to: 6 Proteins, and 99% coverage of the
annotated genomic feature by RNAseq alignments, including
17 samples with support for all annotated introns"
/db_xref="GeneID:111074803"
CDS 470..1888
/gene="LOC111074803"
/note="The sequence of the model RefSeq protein was
modified relative to its source genomic sequence to
represent the inferred CDS: deleted 1 base in 1 codon"
/codon_start=1
/product="LOW QUALITY PROTEIN: protein TIS11"
/protein_id="XP_041447928.1"
/db_xref="GeneID:111074803"
/translation="MSATIVQKSTATVGNSHYFECGDLFQTVASDHHQPQQHQQQQQQ
QLQLQQQTADQLVLDINMEQSQSQQHRLHGALTRTISQPAQQRHPLHQQQQQMQQQQI
QQQQQQHQQQQQQPQGVASLVTIIENLGNMNLHRKLERTQSEPLPQQPMNISRYKTEL
CRPFEEAGECKYGEKCQFAHGFHELRNLQRHPKYKTEYCRTFHSVGFCPYGPRCHFVH
NADEARAQQQAAAQAAKSGQQQQQQQQQQGQGQGQQQQQPQQQQQQQQQGFQKPSQLG
SQTSISQSISISQSPFFMPLSPPLSMSTGSDRESPTGSLSLSPTNSLTSFPFHDAMPL
QHGGYLCMAVGSSGGKHGTGGGSSASSTSSSSGLGLGLGMAMAMGPATPPESPNVPIS
PVQTPPPYEPSTPSSSSSSSMSGGSGSGSGSGMGGQAKQVLQKSMSTPMQQEEMPRLP
VFNRLSSAVEEYQQKLQSILLP"
misc_feature <935..>1123
/gene="LOC111074803"
/note="CCCH-type Zn-finger protein [General function
prediction only]; Region: CTH1; COG5063"
/db_xref="CDD:227395"
ORIGIN
1 gcgttcaaat tttaaaaaac tgtcgttgac aacggacgtg cttgtgcttg tctctgctgt
61 tgttttgccg gaaaacggaa aaccaagtgc aaagtagtgt gccaccgcca ggatcttcat
121 tcggcgcccg caatcaaact gtcttttttt ttgtgtgtaa aatgcaatac gcgaaaaata
181 gataacgcaa caataaaatt atagttcaag tgcaaaaaat aaaaaaaaaa aaacatctaa
241 tttcaaacgc aattcaatcc cccaccaccc gtaaaaccgt aacaatcaaa agaaagaaaa
301 agagaatttt gtcgtcttgt ccagtggaaa cgaatcatca agtccgaaaa caacaaatat
361 agttcaatca gaaggctggg agaaaaaaaa aaaacaacaa aactatagaa atagcaacaa
421 ggacaaataa acagcaggag acgcagcagc gcaggccccc aacaacaaaa tgtctgccac
481 aatagtgcag aaatcgacag caacagtcgg caattcgcat tactttgaat gcggcgactt
541 attccagacg gtggccagcg atcatcacca gccgcagcag caccagcaac agcagcagca
601 gcagcttcag cttcagcagc agaccgcgga tcagctcgtc ctggatatca acatggagca
661 gtcacagtca cagcagcacc gcctccatgg tgccctcaca cgcaccatct cacagccggc
721 tcaacagcgc caccctttgc accagcagca gcagcagatg caacagcaac agatccaaca
781 acaacaacag cagcatcaac agcagcagca gcagccgcag ggtgttgcct ccctggtgac
841 gatcattgag aatctgggga acatgaatct gcaccgcaag ctcgagcgca cacagtccga
901 gccgctgccc cagcagccca tgaacatatc tcgctacaag acggagctct gccgcccgtt
961 cgaggaggcc ggcgagtgca agtacggaga gaagtgccag ttcgcgcacg gcttccacga
1021 gctgcgcaac ctgcagcgcc atcccaagta caagacggag tactgtcgca cattccatag
1081 cgtcggattc tgcccctacg ggccgcgctg ccactttgtg cacaacgcag acgaggcccg
1141 cgcccagcag caggccgcag cccaggcggc taagtcggga cagcagcagc aacagcaaca
1201 gcagcagcaa ggacagggac agggacaaca acagcagcag ccgcagcagc agcagcagca
1261 gcagcagcag ggcttccaga agccatcaca gctcggaagc cagacgagca tcagtcagag
1321 catcagcatc agccagagcc cattcttcat gccgctgagc ccgccgctga gcatgagcac
1381 cggctcggac cgggagtcgc ccaccgggtc gctgtcgctc agcccgacca actcgctgac
1441 gagcttcccc tttcacgatg ccatgccgct gcagcacggc ggctacctct gcatggccgt
1501 tggctcctct ggcggcaagc acggcaccgg cggcggcagc tccgcctcat ccacatcctc
1561 ttcctcgggc ctgggactgg gtctgggcat ggccatggcc atgggaccgg ccacgccgcc
1621 agaaagcccc aatgtgccca tctcgccggt gcaaacacca ccaccgtacg agcccagcac
1681 cccgagcagc agcagcagca gcagcatgag cggcggcagc ggaagtggca gcggaagcgg
1741 aatgggagga caggccaagc aggtgctgca aaagagcatg agcacgccga tgcagcagga
1801 ggagatgccg cgtctgcccg tcttcaaccg actgagctcc gccgtggagg aataccagca
1861 gaagctgcag tccatcctgc tgccctaagc agcaccagca ccaagtgcct acactcaccc
1921 tcgccccaaa aaacaatcat ccaacaacac tgtcccgcat ccatctaatc attcaatcag
1981 tcaccaacag caaccttgac aaaatctcaa caacgactac tccgaaccat tgtagacttg
2041 atcccctggc tgctccctga ttgcccggga taaacttcgc agccacctat ccaccaggac
2101 ttaaaaattc cccctaacct aattcctaat ccaaacaatc aagcaacaac gatgatcttg
2161 accaacgaac agcacagcaa tgtactcttc ttgcaactgc agcacaaaga gctgcagagt
2221 gttgctcaaa aacacaccac aaaacaaaag aaaacaaaga caattgaaac gaaatctgat
2281 cttagagcac acaaacattt gtatacatgc acgcgactgt atacagatcc ttgggtcttg
2341 catttatagg acctattcgc ggggacctta ccgcacacac ccattagaac ccaggcaatt
2401 tccaaattgc tcttgtttaa tatttatgca aacaatttga ctagttttta tatgcgatcg
2461 atcgtatttg agaatcgatt atcaatcgat ccgattaatg taacgaaaat ccaaaacata
2521 tatattcaaa tatatatgta cacgcatgtg catatacatg tatatatata tatatatata
2581 tatttatata ttcgatattt aacgttggac cgtaacgttg tcttccaatc caatccaaaa
2641 cggatcgtcg agagccgata aggttcttta atttattatc ctgctaaatt atgtagtagc
2701 aacgttgtgt acatatgcga tatgagttga tatttcttga taaactttat ataaattata
2761 caatacttac atttacgaga ctacgataat gattacgata atgatataac gataacgcca
2821 atgccaatcc actggctatc gctattatcg atgatatacc tcttgcagtc cactgcaatg
2881 caacaaaaca aaacaaaaaa acaaagcaaa acaaaaacaa aaacgaaaag acccaacccc
2941 aatcacaatc acaattaaaa gaaaagacaa acaagaacag aaccgaacag aaacctgtcg
3001 attgttcatc aaaagactat cgatatcgaa cgaacactac tctcgattcg attcgattca
3061 tgttaatgat atcttattga taaatttttg tgacgcgaac ggaaatgctg attttttaga
3121 cacacataat ttattttcac ataaatatac ataccagata ttttatatgc gattaatgtt
3181 aataatttat gaaaccaacc cgctcacaca tacaacagat ttatacacac aaacacacat
3241 acacttacac acagaacacg gacacacaca cacactcaca caaca