PREDICTED: Drosophila obscura protein kinase shaggy (LOC111072462),
LOCUS XM_041591993 2545 bp mRNA linear INV 14-MAY-2021
transcript variant X2, mRNA.
ACCESSION XM_041591993
VERSION XM_041591993.1
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2545
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2545
/gene="LOC111072462"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 21 Proteins, and 99% coverage of
the annotated genomic feature by RNAseq alignments,
including 4 samples with support for all annotated
introns"
/db_xref="GeneID:111072462"
CDS 42..2456
/gene="LOC111072462"
/codon_start=1
/product="protein kinase shaggy isoform X2"
/protein_id="XP_041447927.1"
/db_xref="GeneID:111072462"
/translation="MAVPRVRKVVRVVRKKKRATGTGTGSSASINDASESDGGGAGAD
TATSSGAASGRQNSISIPISMDEIEAKAAAAASAAGASSSRPWTPMPPRKPPAKAAKI
KRRPSTGGGSGGGSASGNGSIVGAASAKGSAAASAAAEAEQRRQRKDKKRRSSSDSND
SDDNSSSSNSSSSSHSSSAASSSTSSSGESESEEGCSSSTEASSSASTSSPSDVRRRR
NAAANGKKKQKPLSAAAVAAASTCSSSLAALKKSTKSSSSASASTTSVGGKQYKDPSM
KQLIGKLNDLWPEHSVALSIPKEVDKSKEKLEGAWETTGRDGSKITTVVATPGQGTDR
VQEVSYTDTKVIGNGSFGVVFQAKLCDTGELVAIKKVLQDRRFKNRELQIMRKLEHCN
IVKLLYFFYSSGEKRDEVFLNLVLEYIPETVYKVARQYAKTKQTIPINFIRLYMYQLF
RSLAYIHSLGICHRDIKPQNLLLDPETAVLKLCDFGSAKQLLHGEPNVSYICSRYYRA
PELIFGAINYTTKIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEVIKVLGTPTREQIR
EMNPNYTEFKFPQIKSHPWQKVFRIRTPTEAINLVSLLLEYTPSARITPLKACAHPFF
DELRMEGNHTLPNGRDMPPLFNFTDHELSIQPSLVPQLLPKHLATRSSGGGPAAAGAV
SGSTSVSSTGSGASADGAAQAQVGGTAGSSAAGSGSGSGAAAAAAAAGGPATGSNAGG
QGNNSNPGSGAPSAVAAAPAAQQANAGGAAAAGGGGGGGGAAGAATAAGSVAATNAGG
ANVTDS"
misc_feature 1047..1922
/gene="LOC111072462"
/note="The catalytic domain of the Serine/Threonine
Kinase, Glycogen Synthase Kinase 3; Region: STKc_GSK3;
cd14137"
/db_xref="CDD:271039"
misc_feature order(1077..1091,1101..1103,1140..1142,1146..1148,
1179..1181,1221..1223,1287..1298,1305..1307,1311..1316,
1434..1436,1440..1442,1446..1451,1455..1457,1491..1493,
1500..1502,1533..1535,1539..1550,1554..1556,1668..1670)
/gene="LOC111072462"
/note="active site"
/db_xref="CDD:271039"
misc_feature order(1077..1088,1101..1103,1140..1142,1146..1148,
1221..1223,1287..1298,1305..1307,1440..1442,1446..1451,
1455..1457,1491..1493)
/gene="LOC111072462"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:271039"
misc_feature order(1089..1094,1527..1553,1575..1580,1671..1685,
1689..1694,1704..1706,1764..1775)
/gene="LOC111072462"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:271039"
misc_feature order(1179..1181,1311..1313,1434..1436,1440..1442,
1500..1502,1533..1535,1539..1550,1554..1556,1668..1670)
/gene="LOC111072462"
/note="polypeptide substrate binding site [polypeptide
binding]; other site"
/db_xref="CDD:271039"
misc_feature order(1488..1520,1524..1556)
/gene="LOC111072462"
/note="activation loop (A-loop); other site"
/db_xref="CDD:271039"
misc_feature order(1575..1577,1680..1685,1689..1694,1701..1706,
1764..1781)
/gene="LOC111072462"
/note="axin binding site [polypeptide binding]; other
site"
/db_xref="CDD:271039"
ORIGIN
1 tgctactcgg tctcaaggtg gataggtcac aggtggtgcc catggcggtg ccgcgcgtcc
61 gcaaagtggt ccgcgtggtg cgaaaaaaga agcgagcgac gggcactggg acaggatcat
121 cggcatcgat caacgatgcc agcgaatcgg atgggggtgg tgcgggcgct gatacggcta
181 ccagctcggg tgcagcgtcg ggcagacaga actccatctc cataccaatt tcgatggatg
241 agatcgaggc gaaagcagca gcagcagcct cggcggcggg agccagcagt agtcgaccct
301 ggacaccgat gccgccccgt aagccgcccg ctaaggcggc taagatcaag cggcggccct
361 caactggcgg aggaagcgga ggcgggagtg cgagtggcaa tggctccatt gttggcgccg
421 catctgcaaa aggctctgcg gcagcgtcgg cagctgccga ggccgagcag cggcgccagc
481 ggaaggacaa gaagcgtcgc tcctcgagtg attcgaatga cagcgacgac aacagctcct
541 cgagcaactc cagctccagc agtcactcct cctctgcagc ctcaagctcc acctcgtcgt
601 caggcgagtc agagtcggag gaggggtgct cctcttccac cgaagcatcc tcctccgcct
661 ccacctcgtc accgtcggat gtgcgacgga ggcgcaatgc tgccgccaat ggcaagaaaa
721 aacagaaacc actttcggca gcagctgttg cggcggcttc cacctgctcc tcgtcgttgg
781 cggccctcaa gaagagcacc aagagctcat cctcggccag cgccagcacg accagtgttg
841 gtggcaagca gtacaaggat ccaagcatga agcaattgat cggaaaattg aatgatttgt
901 ggcccgagca cagcgtcgca ttgtccattc caaaggaggt cgataagagc aaggagaagc
961 tggagggcgc ttgggagacg acaggtcgcg atggttccaa aattacaaca gttgttgcaa
1021 cacccggcca gggcaccgat cgcgtacaag aggtctccta cacagacaca aaggtcatcg
1081 gcaatggcag cttcggtgtg gtattccagg ccaagctctg cgacaccggc gaactggtgg
1141 caatcaaaaa agttttacag gacagacgat ttaagaatcg cgaattgcaa ataatgcgga
1201 agctggagca ttgtaatatt gtaaagcttt tgtacttttt ctattcgagt ggtgaaaagc
1261 gagatgaagt atttttgaat ttagtcctcg aatatatacc agaaaccgta tacaaagtgg
1321 ctcgccaata tgccaaaacc aagcaaacga taccaatcaa ctttattcgg ctctacatgt
1381 atcaactgtt tagaagtttg gcctacatcc attcgctggg catttgccat cgtgatatca
1441 agccacagaa tctactgctc gatcccgaaa cggccgtgct gaagctctgt gactttggca
1501 gcgccaagca gctgctacac ggtgagccca atgtctcgta catctgctcc cggtattatc
1561 gcgcacccga gctaatattc ggcgccatta attatacaac aaagatcgat gtgtggagtg
1621 ccggctgcgt tctggccgaa ctgctgctgg gccagccaat cttccctggc gactctggtg
1681 tcgatcagct ggtcgaggtc atcaaggtcc tgggcacacc gacaagagaa caaatacgcg
1741 aaatgaatcc aaactatacg gaattcaagt tcccacaaat taagagtcat ccatggcaga
1801 aagttttccg tatacgcact ccgacagaag ctatcaactt ggtgtccctg ctgctcgagt
1861 acacgcccag cgctcggatc acaccgctca aggcctgtgc acatccgttc ttcgatgagc
1921 tgcgcatgga ggggaaccac accttgccca atggccgcga catgccgccg ctatttaact
1981 tcacagatca cgagctctcg atacagccca gcttagtgcc gcagttgttg ccaaagcatc
2041 tggccactcg ctcctcgggc ggtggcccag cagctgccgg tgccgtaagc ggctccacca
2101 gcgtctcctc aacgggcagc ggcgcctctg cggatggtgc cgcccaggct caggtaggcg
2161 ggacagcagg atcatcagca gccggttccg gatcgggatc gggtgcagca gcagccgctg
2221 cagccgccgg tggaccggcg accggctcga atgccggcgg tcaaggaaac aatagcaatc
2281 ccggctccgg tgcgccgtcc gctgtggcag ctgccccggc tgcccagcag gcaaatgccg
2341 gcggagctgc agccgccggc ggtggtggtg gcggaggtgg tgcggcgggt gctgccactg
2401 cagccggctc cgtagctgcg accaatgctg gtggcgccaa cgtgacagat tcatagggac
2461 gatagtatca tacaaaacaa gcacacacca cacacacaca tgtactacct atatatatat
2521 atatatatct gcatgtgtat atata