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LOCUS XM_041591978 7215 bp mRNA linear INV 14-MAY-2021 (LOC111074799), mRNA. ACCESSION XM_041591978 VERSION XM_041591978.1 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq; includes ab initio. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..7215 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..7215 /gene="LOC111074799" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:111074799" CDS 75..6944 /gene="LOC111074799" /codon_start=1 /product="uncharacterized protein LOC111074799" /protein_id="XP_041447912.1" /db_xref="GeneID:111074799" /translation="MGETFYGNYARTGQEQLTESANMLHNNAPWLPPHQSPQQQHQQQ HHPQQQHAQLQQQQQQQQQQQQQPVYASQMFHHQAPPPLGQQQPQYWPEEQQQQQHQQ QQPSLNYNNYFAVQDGGQQVPPPMPLPQPELQQQPPQMYYQPPPQTTTPQHQMHPEIP LDSFDNSSGSINNNNTNNTGSRSDGWGDWGDWNETSNNNNNNSQSQGHSNEAVMEPPP SIVEDAFNIQGSQGNSWQAFANNNNNLELPQSAERQPQQPQHPLQPLQQHLQQLHLQQ PPPEVGSEPEVDAIVPPRAFQNQPPAAGCAPVSGGAEVAPVAGGLVAMAPPSALPPII ASPGGNPFKRSTGPSKRVNILAATQGAAPAPAAAPTPAPPQPATTLAPIPIAPVAAPS AEAIFGLAAEPQPEHFNILTPPAVIPAPVVPGAIPAAASSIYGLPAPSQPQQQQQQLL IPPPLVHESSPLEMGAYENMEVLAAPNDERAQYLQTSHLSEQPEEGEANWEADTDTGL LPPPGLSRLVLGQPELEQQRLVTGTEQPPATAMNVVQALHMEERQADGEDTSEGEQPP RVDDRNLYQTPPRRVVTGVETTAVSVREQREVVLDGENLEDREEPPPALAGVPAVVPE LPPQLQQHHSLPDEAEDMHHNPPSQSAPVAASTAAAASHQQPHPHSQSHQQPLQQQQQ QQQQQQRLEKKRPQAGQRMSRTGNASLDLESEESDEFLLSERERDRERDRRDLPDDRR GRRGHYNNYDGETEDSVRGAGPAGSGESKPVCDSHRRSHEGNSQQHGRRRNPDTDLER ERERDRDRERNWRRRSNKYHSGGEDQERYEHSRRYNNSNYDGESDGPDSSHMGADSEL LLDGGSVGPGAGPSSIGGRSSKNGRERQRRSGAAPEDDYDYDDYERERGQYSRRSIKQ SEKGRPSGGRRDRHEATTGDQRPQRRSNDDGTLERRRRHPHADQRSKRRNYAPYAGAG YDPYGMYEQMSRNPQAYADMYAKFYGQMINSMTAAVAPYKAAAGAGAIGGVPVQQQHQ QQQQMMTAGVQMMDVMRTTGKEGDLLTERERYTHAYINQANEFHRQQYNEGLYQQKLQ QLQQQQQQQLQQLHQQQQELLNRSMADMEDGSASFYGGESFSSRRAIYGHHGLASARS LSNLNGGDLNGTGRSSRCSGMYYAGSECGLDIRGADVAAGGSVTTTSVARPPRRRTPL MYNRPHLVASYAMSLLLKVKPKYAGRGRLRNDVEVAAPRFRDGTSSLLRMYPGPLQGR KLHKDKIISFCKEQIRLGPTRGCTMLYATQKKPQGTVEKYRASHALMWNLLILLLRQN GYIADTDVGDLLLENQQEYPYNPAELDAASETDPEADPEPSDPAEPAVDSEAESETAA TRAASQSSDEGQTAAPGAGADAGASGKAATLSEQEATDKFRSYVLRGNVEEALQWATD NNLWTHAFFLALYEDRYALIDVAQKFLNRAIKANDPLQTLYQMKSCHTPACVSQLRDE QWGDWRSHLSILVTNKSRQPEYDRSSVVALGDTLFQRGDIYAAHFCYLVAQEEFGRYD SSATQLTTLTANVPRLILLGASHYKHFNEFASNEAIIMTEIYEYARSLFDQKFSIGNF QHYKFLLATRILDYGQHFRCTNYLEQIAKHIELKPDSYDSDFIQRVCGLAERLRYHDP ILINRVSFASPPIGNNSSTSSSSKDPAVPEDKAWLRQLRIMADVQQQQQQQQQQQQQE LQQQQQNDIDQQFAEVNQQFRELNMQYDGGNLEDTLHLTKEQPPVPDVHQQQLPEQHM QQQYYEPTPQTQMQLQPQVQHQEELQTDAYGQQTQQLQQQQKPPQMYYDPNPATAQHY EQQQHIAASYGSHIEPAAEAYSAGGQTVDQAAAAAAASGYGYDYWSGTQQPPYGDEQQ LQHMQQQKLKQQPNYRSGNSNNLNNNSLKGSKTAATKSGLEMERTKTLLRQMAASPAT KPQTAATTRATKAEPATRAAEGAIEAAEASPQILATTMTTPAPAATKAFNLNDLQHQH QQGPQGRPAISMPKSKSYGDEDDGAAAGSPAQAAASRSKPGAGAKQGSSGEIGAPGNQ NAGWFGGLWNKLSLKPKNQMILPDDKNPTIVWDKERKCWTNTEGNVDEAESFKPPPKM SDMGMGMGMGMPLGSPPPNMLGSMPTPHLLGGHEAVAAAPQQPQMYGNPHDYAAAAPT PELYPATVPSPAPAPAIPPPAPASASVPAPGGAQPKLQSNMFKMQRNRTLKNSYVDVF NPSGAPMSAPSENVLAPIMAPAALPQGGYFVPGGASASHQQ" misc_feature 3837..5075 /gene="LOC111074799" /note="Ancestral coatomer element 1 (ACE1) of COPII coat complex assembly protein Sec16; Region: ACE1-Sec16-like; cd09233" /db_xref="CDD:187750" misc_feature order(4311..4316,4320..4325,4329..4343,4347..4349, 4353..4355,4383..4385,4389..4391,4395..4400,4404..4409, 4419..4421,4437..4439,4458..4460,4488..4490,4503..4505, 4512..4514,4596..4601) /gene="LOC111074799" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187750" misc_feature order(4842..4844,4908..4913,4917..4922,4929..4934, 4941..4943,5022..5027,5034..5039,5046..5048,5058..5060) /gene="LOC111074799" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:187750" ORIGIN 1 cagagggatt agtggctggc aggggggacg aggatttaac agaggtgtgt gtgtcgtcca 61 ctgcggtgga gcaaatgggt gaaacattct atgggaatta tgcaagaact gggcaggaac 121 agctaaccga gagcgcgaac atgctgcaca acaatgctcc ctggctgcca ccccatcagt 181 cgccacagca gcaacaccag cagcaacacc atccgcagca gcagcatgca cagctgcagc 241 agcagcaaca gcagcagcag cagcagcagc agcagcctgt ctatgccagc caaatgttcc 301 atcatcaggc accaccacca cttggccagc agcagccaca atactggcca gaggagcagc 361 agcagcagca gcaccagcag cagcagccgt cgctaaatta caacaactac tttgcagtcc 421 aagatggggg tcagcaggtg ccaccgccta tgcctctgcc tcagccagag ctacagcaac 481 agcctcctca aatgtattat cagcctccac ctcaaacaac caccccgcaa catcagatgc 541 atcccgaaat ccctttggat tcctttgaca acagcagcgg cagcatcaat aataacaaca 601 ccaacaacac cggcagcagg agtgatggct ggggggattg gggcgattgg aatgagacga 661 gcaacaacaa taacaacaat agccagagcc agggccacag caacgaggcc gtgatggagc 721 caccgccaag catagtggag gatgctttca atattcaggg gtcgcagggc aacagctggc 781 aggcctttgc caacaataac aacaatttgg aacttccgca atccgcggaa cgccagccgc 841 agcaaccgca gcacccgttg cagccgctgc agcaacacct ccaacaactc catttgcaac 901 aaccgccgcc agaggtaggc tcggaacccg aagtggatgc gattgtgccg ccgcgagcct 961 ttcagaatca accacctgcg gcaggatgcg cacctgtctc cggaggggca gaagtggcgc 1021 cagtagccgg aggattggtg gcaatggccc caccatctgc cctgccaccg atcattgcca 1081 gtccgggtgg caaccccttt aaacgttcca ctggacccag caaacgtgtc aacatactgg 1141 ccgccacaca aggagctgct cctgctcctg ctgcagcacc tactcctgct cctccgcagc 1201 ctgccacgac actcgcacca ataccaatag ctcctgtggc agcaccatct gctgaggcaa 1261 tctttggtct ggccgcagag ccacagccgg aacatttcaa tatattgaca ccgccggcag 1321 tgattcctgc acctgttgtt ccgggagcga ttcccgcagc tgcatcctcc atttatggac 1381 tacccgcacc ctcacagcct cagcagcaac agcagcagct gctgattcca ccaccactcg 1441 tccacgagtc gtcaccattg gagatggggg cctatgagaa catggaggtg ctggccgcac 1501 ccaacgacga gagggcccag tatctgcaga ccagtcacct ctcggagcag cccgaggagg 1561 gggaggccaa ctgggaggcg gacacagaca cgggcctgct cccgccaccc ggtctgtcgc 1621 gtctggttct gggccagccg gagttggagc agcagcgact cgtcacgggc accgaacagc 1681 caccggccac ggccatgaat gttgtccagg ccctccacat ggaggagcgt caggccgatg 1741 gagaggacac ctccgaggga gagcagccgc cccgtgtcga cgatcgcaat ctgtatcaga 1801 caccgccacg tcgtgtggtt acgggtgtgg agacgacggc cgtgtctgtg cgggagcagc 1861 gtgaggttgt cctggatggc gagaatctag aggatcggga ggagccacca ccagccctgg 1921 ccggagttcc ggctgtcgtt ccggagctgc cgccacagct acagcaacat cacagcctgc 1981 ccgacgaggc cgaggacatg catcacaatc ccccatcaca gtcggctcca gtggcagcct 2041 ctaccgccgc cgccgcctct caccagcagc cgcacccaca ctcacaatca caccagcagc 2101 ccctgcagca gcagcagcag caacaacagc agcagcagag attggagaag aagcgtcccc 2161 aagccggcca gcgcatgtcg cggacaggaa acgcctcctt ggacctggag tccgaggagt 2221 cggatgagtt tctgctcagc gagcgagaac gcgacaggga gcgcgataga cgggacctgc 2281 ccgatgatcg gcgcggacgt cgtggccact acaacaacta cgacggcgag acggaggact 2341 ctgtgcgggg cgccggccca gccggatctg gggagagcaa accggtgtgc gatagccatc 2401 gccgcagcca cgaaggcaac agccagcagc atggacgacg ccgcaatccc gacacagacc 2461 tggaacggga gcgggaacgc gatcgggatc gggagcgcaa ctggcgccgg cgatcgaaca 2521 agtatcacag cggcggagag gatcaggagc gttacgagca ctcccgccgc tacaacaata 2581 gcaactacga cggagagtcc gatggtcccg actctagcca catgggcgcc gacagcgagt 2641 tgctgctaga tggaggcagc gtcggccctg gggccggacc cagcagcatt ggtggccgca 2701 gcagcaagaa cggcagagag cgccagaggc gcagtggtgc tgcacccgag gatgactacg 2761 actatgatga ctatgagcga gagcgcggcc aatactctcg acgctccatc aagcagtcgg 2821 agaagggccg gcctagtggt gggcggcgcg atcgacatga ggccaccact ggtgatcagc 2881 ggccgcagcg gcgcagcaac gatgatggca ccctggagcg gcgccgtcgt catccgcatg 2941 cggatcaacg ctccaagcgg cgcaactacg ctccgtacgc gggtgctggc tatgacccgt 3001 acggaatgta cgagcagatg tcgaggaatc cccaagccta tgcggacatg tacgctaagt 3061 tctatggcca aatgatcaac tcgatgacgg cagcggtggc tccgtacaag gcggcggctg 3121 gtgcgggtgc cattggtggt gttccggtac agcagcagca ccagcagcag cagcagatga 3181 tgactgcagg agtccaaatg atggatgtca tgcggacgac tggtaaggag ggtgacctgc 3241 ttacagaacg agaacggtac acacacgcat acataaatca agcaaacgaa ttccatcgtc 3301 agcaatataa tgaggggctc taccagcaaa agctccagca gctacagcaa caacagcaac 3361 agcagctcca gcagctacat cagcagcaac aggagctcct taaccgcagc atggcggaca 3421 tggaggatgg cagtgccagc ttctatggcg gtgaatcgtt tagcagccgg cgagctatct 3481 atgggcatca tgggctggcc agtgcccgat cgctgagcaa tctgaatggt ggggatctga 3541 atggaacagg acgaagttca cgttgcagcg gcatgtatta tgctggctct gaatgcggcc 3601 tcgatatcag aggtgccgat gtggctgcag gtggcagtgt aaccaccaca tcggtggccc 3661 gtccacccag gagacgcacc ccactgatgt acaaccgacc gcatttggtg gcctcgtacg 3721 cgatgagcct gctgctgaag gtgaagccaa agtacgccgg acgcggccgc ctgcgcaacg 3781 atgtggaggt ggcggcaccg cgcttccggg acggcacaag cagcctgctg cgcatgtatc 3841 cgggacccct gcagggccgc aagttgcaca aggacaagat catcagtttc tgcaaggaac 3901 agatacgcct cggccccacc cgcggctgta cgatgctgta tgccacgcag aagaagcccc 3961 agggcaccgt ggagaagtac cgggcctcgc acgccctcat gtggaacctg ctcatcctgc 4021 tgctgcgcca gaacgggtac attgccgaca cggatgtggg cgatctgctg ctggagaacc 4081 agcaggagta tccctacaat ccggccgagc tggatgcggc gtccgaaacg gatcccgagg 4141 ctgatccaga gccatcggat ccagcggagc cggctgtgga ttcggaagct gaaagcgaaa 4201 cggccgccac cagggccgcc agtcaatcct cggacgaggg ccagactgcc gctccagggg 4261 ctggcgctga tgctggcgcc tcggggaaag cagcgacgct atcggagcag gaggccacgg 4321 acaagttccg tagctatgtg ttgcgcggca atgtggagga ggccctgcag tgggccaccg 4381 acaataacct gtggacgcac gccttcttcc tggctctgta cgaggaccgc tatgccctga 4441 tagatgtggc ccagaagttc ctcaatcgcg ccatcaaggc caacgatccg ctgcagacgc 4501 tctaccagat gaagagctgc cacaccccgg cctgcgttag ccagctgcgg gacgagcagt 4561 ggggcgactg gcgctcccat ctctccattc tcgtgacgaa caagtcgcgc cagccggagt 4621 acgatcgcag ctcggtggtg gccctgggcg acacgctctt ccagcgcggt gacatctatg 4681 cggcccactt ctgctatctg gttgcccagg aggagtttgg acgctacgac agctcggcca 4741 cccagctgac gacgcttacg gccaatgttc ccagactcat cctgctgggc gcctcacact 4801 acaagcactt caacgagttt gccagcaacg aggccatcat catgacggag atctacgagt 4861 acgcccgctc gctgttcgac caaaagttca gcatcggcaa cttccagcac tacaagttcc 4921 tgctggccac gcgcatcctc gactatggac agcatttccg ctgcaccaac tacctggagc 4981 agattgccaa acacattgaa ctcaagccag acagctacga cagtgatttt attcagcgcg 5041 tatgcggcct ggccgagcgt ttgcgctacc acgatcccat cctgatcaat cgggtgtcgt 5101 ttgccagtcc gccgattggc aacaacagta gcaccagcag cagcagcaag gaccccgccg 5161 tgcccgagga caaggcctgg ctgcgtcagc tgcggatcat ggccgatgtg caacagcagc 5221 agcagcagca acagcaacag caacaacagg agctgcagca gcagcaacag aacgatatcg 5281 atcagcagtt tgcggaggtg aaccaacagt tccgggagct taatatgcaa tatgatggcg 5341 gcaatttgga ggatacccta catctaacca aggagcagcc acctgtgcct gatgtccacc 5401 agcaacagct gccagagcag catatgcagc agcaatacta cgagccaacg cctcagacgc 5461 aaatgcagct acagcctcag gtacagcatc aggaggagct acaaactgat gcgtatggcc 5521 agcagaccca acagttacaa cagcagcaaa aaccgccaca gatgtactat gatcccaatc 5581 cagcaacagc acagcactac gaacagcagc aacatattgc tgcctcatat ggcagccaca 5641 tagaaccagc cgccgaggca tattccgctg gcggccaaac agtagatcaa gcggcagcag 5701 cagcagcagc ttctggctat ggctacgact actggtcggg cacacagcag ccgccctacg 5761 gcgatgagca gcagctgcag cacatgcaac agcagaagct aaagcaacag ccaaactatc 5821 gcagtggcaa cagcaacaac ctaaacaaca attccttgaa aggctcaaag acagcagcca 5881 caaagtctgg cctggagatg gagaggacaa agacactact ccgccaaatg gcagcatccc 5941 ccgctactaa gccacagaca gcagccacaa cacgagccac aaaagcagag ccagcaacac 6001 gagcagcaga aggagcaatt gaggcagcag aagcttcacc acaaatatta gccacaacga 6061 tgacaacgcc agcgccagca gcaacaaagg cattcaattt gaatgatctg cagcatcagc 6121 atcaacaggg gccacagggg cgaccagcaa tctccatgcc aaagtccaag agctacggcg 6181 atgaggacga tggtgcggct gcgggttcac cagcccaagc agcggccagc agaagcaagc 6241 caggagcagg agccaaacag ggatcgagtg gagaaattgg tgcacctggc aatcagaatg 6301 ccggctggtt cgggggattg tggaacaagt tgtcgctgaa accgaagaac caaatgattc 6361 tgccggacga caagaatccc accattgtgt gggacaagga gcgcaagtgc tggaccaaca 6421 ccgagggcaa tgtggatgag gctgaaagct tcaagccgcc gccaaagatg agtgatatgg 6481 gcatgggcat gggcatgggc atgcccttgg gatcaccacc tccaaatatg ctgggcagca 6541 tgcccacacc tcatctgttg ggtggccacg aggctgtggc agcggcgcca cagcagccac 6601 aaatgtatgg gaatccgcat gactatgccg ctgccgcccc aacgcccgag ctgtatccag 6661 caacggtgcc atcgccagcc ccagccccag cgatacctcc accagcacca gcatcagcat 6721 cagtaccagc tcctggtggc gcccagccca agctgcagtc gaacatgttt aaaatgcagc 6781 gcaatcgcac tctaaagaac tcatatgtgg atgtgttcaa tccttcgggt gcgcccatgt 6841 cagcgccatc cgagaatgtc ctggccccca taatggcgcc ggctgcactg ccccaaggtg 6901 gctactttgt acccggcggc gcgtctgcat cgcatcagca gtaggcccac cgctactagc 6961 cccagccaaa accctctaat gccagcgaaa tctgaacttc gagctacgta aaaactacca 7021 gacactagac cagctgtgcg cccacacact cacacacaca cacacacaca cacataacca 7081 gaaaccagac gagaccatac acacgcacac acccattgat cgtgccaccc tgtcactcgc 7141 ctgcctgata catgaagcat agcatgcaac cacacaccac agtggtgaca cagggacggg 7201 attgggtggg gggcc