PREDICTED: Drosophila obscura uncharacterized LOC111079550
LOCUS XM_041591975 2545 bp mRNA linear INV 14-MAY-2021
(LOC111079550), mRNA.
ACCESSION XM_041591975
VERSION XM_041591975.1
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq; corrected model; includes ab initio.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 1% of CDS bases
internal stop codons :: corrected 1 genomic stop codon
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..2545
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2545
/gene="LOC111079550"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 1 Protein, and 97% coverage of the
annotated genomic feature by RNAseq alignments"
/db_xref="GeneID:111079550"
CDS 1..2310
/gene="LOC111079550"
/note="The sequence of the model RefSeq protein was
modified relative to its source genomic sequence to
represent the inferred CDS: substituted 1 base at 1
genomic stop codon"
/codon_start=1
/transl_except=(pos:1531..1533,aa:OTHER)
/product="LOW QUALITY PROTEIN: uncharacterized protein
LOC111079550"
/protein_id="XP_041447909.1"
/db_xref="GeneID:111079550"
/translation="MKLSAAAAAAAAAVSEANKIKRSIKTAPIAMAAFLGNDISSGSP
SSSAGIRSSATAAAAATAALNGGGGGGGGRGGGRQGAANGGTGSASNSGPSASSKSEK
QDDSEEGGIGILCGCGNRAPKSHCISATGVLLLVLLYTAMGSIIFVTLEGELEDGSAV
ETAVAASKPYPRTELANAEIRSRTVDRLWSITEDLNILYKENWTRLAAQEVQLFQDTL
LRAVRQSKVYPPGGIQMNAPTHKWTYASAFLYSMTLITTIGYGGVSPRTQWGRIAALI
YALLGIPIILLYLSAMGDALSSGMRCLFRRQGGEKGGAGDGDGVDNGGSGGNGRKSDK
KKAKKGHYGHHGGGNNMHYGMPQTVYQQQQQQQQQQQQQQQQEKKSSAESENEQGTGP
RGSASVPISICVCVMVCYVTSGAILFHRLQNWSVLESLYFCFTSLGTIGFGELAPRGT
LALYMASAYILVGMAVVAMCFNLIQAEIVQWLRKFSVQDNVTPKAEEVTLVSVSVTPK
PSXQRPSADLLGGIAGGPSTSSGLGVGVVGQPPNSLAQHQTMFFGPAHTLTQYSSLPR
RSHMHGGHGVGPSSSGAAFQRNTPIRRSTGIPEHHMEYFVPRSISEFNLSGVGDLALP
PPRRYSPNMNNMGMGTGMGMGMGNGMGMGMGMGMGMGMGMGLPHGLQLGPPQTLLCGG
GPQQQQQQPPPPPAQLQIVTLKPRSEKMVTFEDESKQQQQQAPPPPSIVSSGVNSVTA
ATTHCPHGVPTTPRKSSGIGGLGGGDIFM"
misc_feature <721..891
/gene="LOC111079550"
/note="Ion channel; Region: Ion_trans_2; pfam07885"
/db_xref="CDD:462301"
misc_feature 1216..1440
/gene="LOC111079550"
/note="Ion channel; Region: Ion_trans_2; pfam07885"
/db_xref="CDD:462301"
ORIGIN
1 atgaagctat cagcagcagc agcagcagca gcagcagcag tctcagaggc aaacaaaatc
61 aagcgttcga ttaaaacggc gccaattgcg atggcggcct ttctcggtaa cgacatcagc
121 agcggcagcc ccagcagctc cgctgggata cgcagcagtg ccaccgcagc cgcagctgca
181 acggcagcac tcaacggcgg tggtggtggt ggcggggggc gtggcggtgg tcgccagggt
241 gcggccaatg gcggcactgg cagcgcatcg aactcgggtc catcggcatc gtccaagtcg
301 gaaaagcagg acgacagcga ggagggtggc attggcatcc tctgtggctg tggcaacagg
361 gcccccaagt cccattgcat atccgcaaca ggcgtgctgc tgctggtgct gctgtacacc
421 gccatggggt cgatcatctt tgtgaccctc gagggtgagc tggaggacgg cagtgccgtg
481 gagacggctg tggccgcctc caagccatat ccacgcaccg aattggccaa cgccgagata
541 cgctccagaa ctgtggaccg cttgtggtcg ataacggagg atctcaatat actgtacaag
601 gagaactgga ctcgtctggc tgcccaggag gttcaactgt ttcaggacac actgctgcgg
661 gccgttcgcc agtcaaaggt ttatccacca ggcggcatcc agatgaatgc accgacccac
721 aaatggacct atgcctcggc ctttctctac tccatgacat taattacaac gataggctat
781 ggcggcgtct cgccacgcac ccaatggggc cgcatcgccg ctctgattta cgccctcctc
841 ggcataccca tcatactgct ctacttgtca gccatgggcg atgcactgtc cagcggcatg
901 cgctgcctgt tccgtcgcca gggcggtgag aagggtgggg caggcgatgg ggatggcgtc
961 gacaatggag gcagcggtgg caacggacga aaatcggaca agaagaaggc aaagaagggg
1021 cactacggac accatggtgg tggcaacaat atgcactacg gcatgccgca aaccgtctac
1081 cagcagcagc aacagcagca gcagcagcaa caacagcagc agcagcagga aaagaaaagc
1141 tctgctgaat cggaaaacga acagggaact ggaccccggg gctccgccag cgtgcccatc
1201 tcgatctgtg tgtgcgtgat ggtctgttat gtgaccagcg gtgccatact cttccaccgg
1261 ctgcagaact ggagcgtgct ggagtcactg tacttctgct tcacctcgct gggcaccatc
1321 ggcttcggcg agctggcccc caggggcaca ctggccctgt acatggcctc cgcctatata
1381 ctggtgggca tggccgtggt ggccatgtgc ttcaacctga tccaggccga gattgtgcaa
1441 tggctgcgca agttcagcgt gcaggacaac gtgacgccca aggccgagga ggtgaccctc
1501 gtgtcggtgt ccgtcacccc gaagccctcc tgacaacgac ctagcgcgga cctgctgggc
1561 ggcatcgccg gcggtcccag cacctcctcc ggtctgggcg tgggcgtggt aggccagcca
1621 cccaatagcc tggcccagca ccagaccatg ttcttcggcc cggcccacac cctgacccag
1681 tacagctcgc tgccccgccg cagccacatg catggcggcc acggggtcgg accatcgtcc
1741 tcgggagcgg ccttccagcg caacacgccc atccgacgct ccacgggcat accggagcac
1801 cacatggagt actttgtgcc gcgcagcatc agcgagttca acctgtcggg cgtgggtgat
1861 ctggccctgc ccccgccacg tcgctactcc cccaacatga ataacatggg catgggcacg
1921 ggcatgggaa tgggcatggg aaatggcatg ggtatgggca tgggcatggg aatgggcatg
1981 ggcatgggta tgggactgcc gcatggcctg caactgggac caccgcagac actgctatgt
2041 ggcggcggcc cccagcaaca gcagcaacaa ccaccgccgc cgccggccca gctgcagata
2101 gtcaccctga agccgcgcag cgagaagatg gtcaccttcg aggacgagtc caagcagcag
2161 cagcagcagg cgccgccacc accctccatt gtctcctccg gcgtgaactc tgtgacggcg
2221 gcgaccacac attgtcccca cggggtgcca accacgccgc gcaagtcctc cggcatcggt
2281 gggttgggtg gcggtgacat cttcatgtga ccagccagct gactagcggc ggcgtccagt
2341 gactgctcgc cagtggcatc cggtgccggt gccagtgccg gtgctggtgc tggtgctggg
2401 gcggcatctg agctgaatgc agcgatgcgt ctgcgggata gcattgacga ggcgctgtgc
2461 cccaagtcgg gaccggcccc aggtgaggtg atacgtgtct aagtgaatca agccaaatgc
2521 tcacactgta agtaattgca cacac