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LOCUS XM_041591975 2545 bp mRNA linear INV 14-MAY-2021 (LOC111079550), mRNA. ACCESSION XM_041591975 VERSION XM_041591975.1 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq; corrected model; includes ab initio. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases internal stop codons :: corrected 1 genomic stop codon ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..2545 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..2545 /gene="LOC111079550" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:111079550" CDS 1..2310 /gene="LOC111079550" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon" /codon_start=1 /transl_except=(pos:1531..1533,aa:OTHER) /product="LOW QUALITY PROTEIN: uncharacterized protein LOC111079550" /protein_id="XP_041447909.1" /db_xref="GeneID:111079550" /translation="MKLSAAAAAAAAAVSEANKIKRSIKTAPIAMAAFLGNDISSGSP SSSAGIRSSATAAAAATAALNGGGGGGGGRGGGRQGAANGGTGSASNSGPSASSKSEK QDDSEEGGIGILCGCGNRAPKSHCISATGVLLLVLLYTAMGSIIFVTLEGELEDGSAV ETAVAASKPYPRTELANAEIRSRTVDRLWSITEDLNILYKENWTRLAAQEVQLFQDTL LRAVRQSKVYPPGGIQMNAPTHKWTYASAFLYSMTLITTIGYGGVSPRTQWGRIAALI YALLGIPIILLYLSAMGDALSSGMRCLFRRQGGEKGGAGDGDGVDNGGSGGNGRKSDK KKAKKGHYGHHGGGNNMHYGMPQTVYQQQQQQQQQQQQQQQQEKKSSAESENEQGTGP RGSASVPISICVCVMVCYVTSGAILFHRLQNWSVLESLYFCFTSLGTIGFGELAPRGT LALYMASAYILVGMAVVAMCFNLIQAEIVQWLRKFSVQDNVTPKAEEVTLVSVSVTPK PSXQRPSADLLGGIAGGPSTSSGLGVGVVGQPPNSLAQHQTMFFGPAHTLTQYSSLPR RSHMHGGHGVGPSSSGAAFQRNTPIRRSTGIPEHHMEYFVPRSISEFNLSGVGDLALP PPRRYSPNMNNMGMGTGMGMGMGNGMGMGMGMGMGMGMGMGLPHGLQLGPPQTLLCGG GPQQQQQQPPPPPAQLQIVTLKPRSEKMVTFEDESKQQQQQAPPPPSIVSSGVNSVTA ATTHCPHGVPTTPRKSSGIGGLGGGDIFM" misc_feature <721..891 /gene="LOC111079550" /note="Ion channel; Region: Ion_trans_2; pfam07885" /db_xref="CDD:462301" misc_feature 1216..1440 /gene="LOC111079550" /note="Ion channel; Region: Ion_trans_2; pfam07885" /db_xref="CDD:462301" ORIGIN 1 atgaagctat cagcagcagc agcagcagca gcagcagcag tctcagaggc aaacaaaatc 61 aagcgttcga ttaaaacggc gccaattgcg atggcggcct ttctcggtaa cgacatcagc 121 agcggcagcc ccagcagctc cgctgggata cgcagcagtg ccaccgcagc cgcagctgca 181 acggcagcac tcaacggcgg tggtggtggt ggcggggggc gtggcggtgg tcgccagggt 241 gcggccaatg gcggcactgg cagcgcatcg aactcgggtc catcggcatc gtccaagtcg 301 gaaaagcagg acgacagcga ggagggtggc attggcatcc tctgtggctg tggcaacagg 361 gcccccaagt cccattgcat atccgcaaca ggcgtgctgc tgctggtgct gctgtacacc 421 gccatggggt cgatcatctt tgtgaccctc gagggtgagc tggaggacgg cagtgccgtg 481 gagacggctg tggccgcctc caagccatat ccacgcaccg aattggccaa cgccgagata 541 cgctccagaa ctgtggaccg cttgtggtcg ataacggagg atctcaatat actgtacaag 601 gagaactgga ctcgtctggc tgcccaggag gttcaactgt ttcaggacac actgctgcgg 661 gccgttcgcc agtcaaaggt ttatccacca ggcggcatcc agatgaatgc accgacccac 721 aaatggacct atgcctcggc ctttctctac tccatgacat taattacaac gataggctat 781 ggcggcgtct cgccacgcac ccaatggggc cgcatcgccg ctctgattta cgccctcctc 841 ggcataccca tcatactgct ctacttgtca gccatgggcg atgcactgtc cagcggcatg 901 cgctgcctgt tccgtcgcca gggcggtgag aagggtgggg caggcgatgg ggatggcgtc 961 gacaatggag gcagcggtgg caacggacga aaatcggaca agaagaaggc aaagaagggg 1021 cactacggac accatggtgg tggcaacaat atgcactacg gcatgccgca aaccgtctac 1081 cagcagcagc aacagcagca gcagcagcaa caacagcagc agcagcagga aaagaaaagc 1141 tctgctgaat cggaaaacga acagggaact ggaccccggg gctccgccag cgtgcccatc 1201 tcgatctgtg tgtgcgtgat ggtctgttat gtgaccagcg gtgccatact cttccaccgg 1261 ctgcagaact ggagcgtgct ggagtcactg tacttctgct tcacctcgct gggcaccatc 1321 ggcttcggcg agctggcccc caggggcaca ctggccctgt acatggcctc cgcctatata 1381 ctggtgggca tggccgtggt ggccatgtgc ttcaacctga tccaggccga gattgtgcaa 1441 tggctgcgca agttcagcgt gcaggacaac gtgacgccca aggccgagga ggtgaccctc 1501 gtgtcggtgt ccgtcacccc gaagccctcc tgacaacgac ctagcgcgga cctgctgggc 1561 ggcatcgccg gcggtcccag cacctcctcc ggtctgggcg tgggcgtggt aggccagcca 1621 cccaatagcc tggcccagca ccagaccatg ttcttcggcc cggcccacac cctgacccag 1681 tacagctcgc tgccccgccg cagccacatg catggcggcc acggggtcgg accatcgtcc 1741 tcgggagcgg ccttccagcg caacacgccc atccgacgct ccacgggcat accggagcac 1801 cacatggagt actttgtgcc gcgcagcatc agcgagttca acctgtcggg cgtgggtgat 1861 ctggccctgc ccccgccacg tcgctactcc cccaacatga ataacatggg catgggcacg 1921 ggcatgggaa tgggcatggg aaatggcatg ggtatgggca tgggcatggg aatgggcatg 1981 ggcatgggta tgggactgcc gcatggcctg caactgggac caccgcagac actgctatgt 2041 ggcggcggcc cccagcaaca gcagcaacaa ccaccgccgc cgccggccca gctgcagata 2101 gtcaccctga agccgcgcag cgagaagatg gtcaccttcg aggacgagtc caagcagcag 2161 cagcagcagg cgccgccacc accctccatt gtctcctccg gcgtgaactc tgtgacggcg 2221 gcgaccacac attgtcccca cggggtgcca accacgccgc gcaagtcctc cggcatcggt 2281 gggttgggtg gcggtgacat cttcatgtga ccagccagct gactagcggc ggcgtccagt 2341 gactgctcgc cagtggcatc cggtgccggt gccagtgccg gtgctggtgc tggtgctggg 2401 gcggcatctg agctgaatgc agcgatgcgt ctgcgggata gcattgacga ggcgctgtgc 2461 cccaagtcgg gaccggcccc aggtgaggtg atacgtgtct aagtgaatca agccaaatgc 2521 tcacactgta agtaattgca cacac