PREDICTED: Drosophila obscura high affinity cGMP-specific
LOCUS XM_041591974 6135 bp mRNA linear INV 14-MAY-2021
3',5'-cyclic phosphodiesterase 9A (LOC111070729), mRNA.
ACCESSION XM_041591974
VERSION XM_041591974.1
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq; corrected model; includes ab initio.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 3% of CDS bases
frameshifts :: corrected 2 indels
##RefSeq-Attributes-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-1148 JAECWW010000165.1 264375-265522
1149-1150 "NN" 1-2
1151-2166 JAECWW010000165.1 265523-266538
2167-2853 JAECWW010000165.1 266644-267330
2854-3179 JAECWW010000165.1 290509-290834
3180-3331 JAECWW010000165.1 295947-296098
3332-3439 JAECWW010000165.1 296160-296267
3440-3566 JAECWW010000165.1 306404-306530
3567-3862 JAECWW010000165.1 306608-306903
3863-4256 JAECWW010000165.1 306973-307366
4257-5495 JAECWW010000165.1 307447-308685
5496-6135 JAECWW010000165.1 308687-309326
FEATURES Location/Qualifiers
source 1..6135
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..6135
/gene="LOC111070729"
/note="The sequence of the model RefSeq transcript was
modified relative to its source genomic sequence to
represent the inferred CDS: inserted 2 bases in 1 codon;
deleted 1 base in 1 codon; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 6
Proteins, and 97% coverage of the annotated genomic
feature by RNAseq alignments"
/db_xref="GeneID:111070729"
CDS 855..5645
/gene="LOC111070729"
/note="The sequence of the model RefSeq protein was
modified relative to its source genomic sequence to
represent the inferred CDS: inserted 2 bases in 1 codon;
deleted 1 base in 1 codon"
/codon_start=1
/product="LOW QUALITY PROTEIN: high affinity cGMP-specific
3',5'-cyclic phosphodiesterase 9A"
/protein_id="XP_041447908.1"
/db_xref="GeneID:111070729"
/translation="MYQDSGCSSSSSRRGSTSAAAAAAAAAAAAAAATGAAAGAATAN
SSSDEETLETLTIITTTITETEINAAATTATAKAKTTTTTVIATTTATATTAAVXAAT
AKVATAATSSDIEDSSLAESESEECLEYIEIDCQTAQGSSGNSNSNSSTSSGSGSGNA
VLQRGNNQQLQHPHPHSHSHQQQSTAAAAALGADVRLLRKIGYIASRVRGLSKFYGDF
HLVNPYSARRQRRQLQEILLKHSIFDPGKERERALLLAAAAVAVGAAVQQTAAPPLAG
NSSSSSIEAASSHSQSRSRSRSSDLEEEEEPEEESSPNEDPLEQPEVTATTPAGTGTT
ATATTTTTTTTTTTTTVRRKSSSSSTFSGAAATVSGSVSISASASQSFASTSTPINLL
EELLIQFYEDQDQHRCKLTVIRHQRACNSPDTTNNNCNNISNNNNMSSPDNQLPGSST
SQAFGAATSGAASYLQPTSLPDGSDNPRRRRASDCSAVQAAQAALSNQLHCITLKNNN
CATATGKLPFHRGSCGAAGEHLLAANSIANRATIILSKSCSNVDGDAHGLGMGIGVGV
GVGVGVGVGVGVTNQMRASATDIESNTLNGAQGAMATIAAAAASNNGNGNGNGNGNGN
NEYSILQLNNTIIQCHFNDDDFRALVKDLKRKVEYTERMNWLCLSKRPLGPPHRKSSL
PKHQEVKRRFLEICDTNFSDEVKAALRLPAFDSYEWGDADVIHLMQTMFIELGFIEKF
SIPAETLREWLYEVYKHYNEVPFHNFRHCFCVAQMMYAITRQANLLSRLGDLECLILL
VSCICHDLDHPGYNNIYQINARTELALRYNDISPLENHHCSIAFRLLEHPECNIFKNF
SRDSFNTIREGIIRCILATDMARHNEILTQFMEITPIFDYSNRAHINLLCMILIKVAD
ISNEARPMDVAEPWLDRLLQEFFAQSAAEKSEGLPVTPFMDPDKVSKPGSQVRFIGLV
LLPLFEALGELVPELTELIIIPVRIALEYYRRLNDAQTKTRKSVADSNTSDSNSGTMD
SNAAMVSTPGASGDKMIMDKGQGNAQGAGAGGGGGGGGGGGTGSVSPQMPRSGSGISV
KSRRSIPSQKSASRTSVDEPGGMAAELHDLPEGSESGDSETATEVDVAEKTSKFKVDT
EGSSNRSKSSHSNSRKSSREKRPSMIGELCSSGGGQRIRNSYGNIHGYHSNRCHFGNN
RAVSLDQYSSGHSRRLSDGLPQVISDSNVFYGRHHQRSGGHESAAAGAAGAAQRGQED
TNANTSAAAGSGAGSGARAGSNIQLNELLARTEANSDGDADGEISAAEMLPTASVPLL
SDVAASASSSNGNVSPPSGQQLEQIGLASNGAPASANANASASSQAGVAAVSGAIAIG
GGGGGGAGGSGSGGSGSWKSRLRQFSDYFSFSFDKGNKRFGSTRSSPCHGRANNNGAE
AGPSAGDSNSALDVAGGGGAGAGTGPGTGTGTGPGMSGGKPQSICCTISNSQQSSSGR
AGASSGGGTMHRHRAYSLDVPCSRGPGMTRHSSNDSSRQSSRHDDSNNTLHSAGGGGG
AAGEVPGIRIASVDGVVVIPPSLSVELELGLASLASSSEVAPKI"
misc_feature 3141..3827
/gene="LOC111070729"
/note="3'5'-cyclic nucleotide phosphodiesterase; Region:
PDEase_I; pfam00233"
/db_xref="CDD:459723"
ORIGIN
1 atttgttagc gtcaaacgga attgttgcca aacggaaacg gaagtggcgc caccccaaag
61 ccccagccac acaaaaccca tccgcccacc gaccggtgac gggagacggg ataccggaga
121 ccgtggcgaa gagtggtaga gggagaggga gagaggagag gcatataact ggcgaagcag
181 acaaacagtt gaataatgca aattaaaata caataaaatg taaaacacaa cagcaacaag
241 ctggtggaaa atagcaaaga aaagcgctag agtcacgcga gtggtgactg gagagtgtgg
301 agtggagact aggaggtgga gagcagagag tagcgagtgg atggtgtaag aggttgacat
361 gcccaaaaaa tgcgcgtggc ggcaactttt ccactgaatt gatttgagca gcggcaacca
421 gtgcgtatac gcaatacgcg atacgcgttc tacggtctgt tctgttccgt tctgtttacg
481 cgggaaattt gcataacttt gctgccgtgg cattaaaaac atcaaaaaca aattgcaagt
541 aacaaaagaa acggccataa aaaggcgcca gcctcataaa aaatacagaa aacggcggaa
601 aaaaaacaga ctcaacgcag aaaaggaaga gagatcctta gtgccagctc aaaattaatt
661 tatgcatcag cagcagcagt agcagcaaat caaatacaaa tacgggaaaa tatcaagaaa
721 aaaaaattaa taacaattaa agcagcggac agcagcgaga gtgtaaacga gcgggtgagc
781 gagcgagccg cgcggcaaac agagaacaag agaaaaaaaa aaaggcaaaa agggttcgcg
841 agggttgcct ataaatgtac caggacagcg gctgcagcag cagtagcagt cgacgtggca
901 gcaccagtgc agcagcagca gcagcagcag ctgcagcagc agcagcagca gcaacaggcg
961 ctgcagcagg cgctgcaaca gcaaacagca gcagcgacga ggaaaccctc gagacactca
1021 cgataatcac cacgaccata accgagaccg aaatcaatgc ggctgccacc acggcaacgg
1081 ccaaagcgaa aaccacaacc acaactgtca tagccacaac gacggcaacg gcaacaacag
1141 ccgcagtgnn ggcagcaaca gctaaggttg caactgctgc aacgagcagc gacatcgagg
1201 acagcagctt ggcggagagc gagagcgagg agtgtcttga gtacattgag atcgattgcc
1261 agacggcaca gggatcatcc ggcaacagca acagcaacag cagcaccagc agtggcagtg
1321 gcagtggcaa tgccgtgctg caacgtggca acaaccagca gctccagcat ccacatccgc
1381 attcacattc gcatcagcaa cagtcaacag ccgccgccgc cgcgttaggc gccgatgtgc
1441 ggctgctgcg caagatcggc tatatagcat cgcgggtccg tggcctgtcc aagttttacg
1501 gcgactttca tctggtcaat ccgtacagcg ctcgtcgcca gcgtcgccag ctgcaggaga
1561 tcctgctgaa gcactcgatc ttcgatccgg gcaaagagcg cgagcgcgcc ctgcttttgg
1621 ccgctgccgc agtggccgtt ggggcagctg tccagcagac agcagcaccg ccgcttgcgg
1681 gcaacagcag cagcagcagc atcgaggcgg ccagcagtca cagtcagagt cggagtcgca
1741 gtcgcagcag cgacctcgag gaggaggagg agcccgagga ggagtcgtca ccaaacgagg
1801 atccgttgga gcagcctgag gttacagcca ccacgccagc aggaacagga acaacagcaa
1861 cagcaaccac aacaacaaca acaactacaa ccacgacaac cactgtgcgt cgcaagtcct
1921 cgagcagctc gacgtttagc ggcgcggcag ccactgtttc cggttccgtg tccatttcgg
1981 cctccgcctc gcagtcgttc gcctcgacca gcacccccat caatctgctg gaggagctgc
2041 tgatccagtt ctacgaggac caggaccagc atcgctgcaa gctgaccgtc attcggcacc
2101 agcgtgcctg caactccccg gacaccacca acaacaactg caacaacatc tccaacaaca
2161 acaacatgag cagcccggac aaccagctgc ccggcagctc caccagccag gcgttcgggg
2221 cggccacaag cggcgccgcc tcctacttgc agcccaccag cctgcccgac ggcagcgaca
2281 atccccgccg gcggcgtgcc agcgactgct cggcggtgca ggccgcccag gcggcgctct
2341 ccaatcagct gcactgcatc acgctgaaga acaacaactg tgccacggcc acggggaagc
2401 tgccgttcca tcgcggcagc tgcggcgccg ccggggagca tctgctcgcg gccaactcga
2461 tcgccaatcg agccaccatc attctgagca aatcctgcag caatgtggat ggcgatgccc
2521 acggcttggg catgggcatt ggtgtgggcg tcggtgtcgg cgttggcgtc ggtgttggcg
2581 tgggagtcac caatcagatg cgcgccagtg ccacggacat cgagtcgaat accctgaacg
2641 gggcccaggg cgccatggcc accattgccg cggcggcagc ctcaaacaat ggcaacggca
2701 acggcaatgg caacggcaac ggcaacaacg agtacagcat tctacaactg aacaacacga
2761 tcatccagtg tcacttcaac gatgacgatt tccgcgccct ggtcaaggat ctcaagcgca
2821 aggtcgagta cactgagcgc atgaattggt tatgtctctc caaacggcca ttggggccgc
2881 cacatcgtaa aagcagtcta ccaaagcatc aggaggtgaa gcgtcgcttc ctggaaattt
2941 gtgataccaa tttctcggac gaggtgaagg ccgccctccg cctgcccgcc ttcgattcgt
3001 acgaatgggg cgatgccgat gtcatccacc tgatgcagac gatgttcatc gagctgggat
3061 tcattgagaa gttcagcatt cccgcagaga cgctgcgcga gtggctctat gaggtctaca
3121 agcattacaa tgaggtgccg ttccataatt ttcgtcactg cttttgcgtt gcccaaatga
3181 tgtacgccat tacacgccaa gcgaatctgt tgagccgcct tggcgatctc gagtgtctca
3241 tcctgctggt gtcctgcatc tgtcacgacc tcgatcatcc cggctacaac aatatctacc
3301 agatcaatgc tcgcaccgag ctggcactca gatataatga catctcaccg ctggagaatc
3361 atcactgttc gatagcattc cgtttgctgg agcatcccga gtgcaacata ttcaagaact
3421 ttagccgtga cagcttcaac accatacgtg agggcatcat tcgctgcatc ctggccaccg
3481 acatggcccg ccacaacgag atcctcaccc aattcatgga gataacgccc atctttgact
3541 acagcaatcg ggcccacatc aatctgctgt gcatgatcct cattaaggtg gcggacattt
3601 cgaatgaggc acggcccatg gacgtggccg agccgtggct ggatcgactg ctgcaggagt
3661 tctttgcaca gagtgcggcc gaaaagtcgg agggattgcc ggtgacgccg tttatggatc
3721 cggataaggt gagcaagccg ggctcccagg tgcgcttcat tggactggtg ctgctgccgc
3781 tcttcgaggc actcggcgag ctggtgccag agctcacgga gctcatcatc ataccagtgc
3841 gcattgccct ggagtattac agacgcctga acgatgccca gacaaagacg cgcaaatccg
3901 tggccgacag caacacttcg gacagcaaca gcggcaccat ggactccaac gcggccatgg
3961 tgagcacccc gggtgcctcc ggcgacaaga tgatcatgga caagggccaa ggcaacgcac
4021 agggcgctgg cgctggcggt ggcggtggcg gtggcggtgg cggtggcact ggcagcgtct
4081 ccccccaaat gccgcgctcc ggctctggta taagcgttaa atcacgccgc agcataccct
4141 cgcaaaagtc cgcctcacgc acctccgtgg acgagccggg gggcatggca gccgagctgc
4201 acgatctgcc cgagggcagc gagagcggcg actcggagac ggccaccgaa gtggatgttg
4261 ccgagaagac atccaagttc aaggtggaca cggaaggcag cagcaaccgt agcaagtcct
4321 cgcactcgaa ctcacgcaaa tcgtcgcgcg agaagcgccc ctcgatgatc ggtgagctgt
4381 gcagcagcgg cgggggccag cgcatccgca actcgtacgg caacatccac ggctatcaca
4441 gcaatcgctg ccactttggc aacaatcggg ccgtcagcct cgaccagtac agcagcggcc
4501 acagccgacg cctgtccgac ggcctgcccc aggtgatctc cgacagcaac gtgttctacg
4561 gacgccacca ccaacgcagc ggcggccacg agtcggctgc agcaggcgca gcaggagctg
4621 ctcagcgtgg ccaagaggac accaatgcca acacgagtgc tgcagctgga tcgggagcag
4681 gatcaggagc cagagctggt agcaacatcc aactgaatga actgctggcc cgcaccgagg
4741 cgaattcgga tggggatgcg gatggggaga tcagtgccgc ggagatgctg cctacggcga
4801 gtgttcccct gctgtcggat gtggcagcga gcgcctcctc ctccaacggc aacgtctctc
4861 cacccagtgg ccagcagctg gagcagatcg ggctggccag caacggtgca ccggccagtg
4921 ccaatgccaa tgccagtgcc agcagccagg ccggagtcgc cgcagtgtcc ggtgctatcg
4981 caatcggtgg cggcggtggc ggcggggccg gtggcagtgg ctccggtggc tccggttcgt
5041 ggaagtcgcg gctgcgccag ttctcggact acttcagctt cagctttgac aagggcaaca
5101 aacgctttgg cagcacccgc agcagtccct gccatggcag ggccaacaac aatggagccg
5161 aagccgggcc cagtgccgga gacagcaaca gcgccctgga tgtggccgga ggaggaggtg
5221 caggagctgg gaccgggcct ggaactggaa ctggcactgg tcctggaatg agtggcggta
5281 agccgcagtc catttgctgc accatttcga atagccagca gtcgagctct ggcagagctg
5341 gagccagcag tggtggcggt acgatgcacc gtcatcgggc ctacagcctg gacgtgccct
5401 gcagccgcgg cccgggcatg acacgccact cgtccaacga cagcagccgc cagtcgtcgc
5461 gccacgatga cagcaacaac acgctgcaca gtgcaggcgg cggcggcggt gctgccggcg
5521 aggtgcccgg catacgcatc gcatccgtgg acggggtcgt ggtcattccg cccagcctca
5581 gcgtagagct ggagctgggg ctcgccagct tggcctcctc ctcggaggtg gcgccaaaga
5641 tttgacaaca ggggagcacc tatgactcca gcaccgagaa gacggccacc gacatctcgc
5701 tgtcccaccc ggggcccatc gttgccctgc ttccgccgga ggacatcgtt ggcgacgacg
5761 acgacgacga cgacgatgca gatgcggatg cggagcatca gctgcagccg gatgccgcca
5821 gcaactgcga ggtctccgcc atatccatga cggtatggtc ggccatcggg cagcggctca
5881 atgccctcgt ttgccattgc tgcgagcgca agttgccaga gcccgaaaat gtctaaatga
5941 accttgccac gccccacgcc cccgtgacag cagctgatga aggactaact gcaactgaat
6001 tgttcccctg gcagtcgact gctttggagt tttacctatt aattttagtc gattgattca
6061 ttttgctcct cctttttttt tgtttacctt ttaagtattt ttttatttat gtacacctac
6121 gcatacaccc acaca