PREDICTED: Drosophila obscura SWI/SNF-related matrix-associated
LOCUS XM_041591969 1102 bp mRNA linear INV 14-MAY-2021
actin-dependent regulator of chromatin subfamily B member 1-A-like
(LOC111072411), mRNA.
ACCESSION XM_041591969
VERSION XM_041591969.1
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1102
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1102
/gene="LOC111072411"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 100% coverage of the annotated
genomic feature by RNAseq alignments"
/db_xref="GeneID:111072411"
CDS 81..392
/gene="LOC111072411"
/codon_start=1
/product="SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily B member
1-A-like"
/protein_id="XP_041447903.1"
/db_xref="GeneID:111072411"
/translation="MSEKNNNPEEFAIKLCAELGLGGEFVTAIAYSIRGQLSWHCRTY
AFSEAPLSTIDVPFRNPSDADAWAPFLETLTDAEMEKKIRDQDRNTRRMRRLANTTTG
W"
misc_feature <96..323
/gene="LOC111072411"
/note="SNF5 / SMARCB1 / INI1; Region: SNF5; pfam04855"
/db_xref="CDD:428158"
ORIGIN
1 agagctgtgt ccagcgtgtc atagtcaagc tcaacataca cgtgggcaac acgtcgctcg
61 tcgatcaggt cgagtgggac atgtccgaga agaacaacaa tccggaggag tttgccatca
121 agctctgtgc cgagctggga ttgggtggag agtttgtgac ggccatagca tatagtatac
181 gtggccagtt gtcgtggcac tgtcgcacat acgccttcag cgaggcaccc ctgtccacca
241 tcgatgtgcc attccggaat cccagcgacg cggatgcgtg ggccccattc ctagagacgc
301 taaccgatgc cgagatggag aagaagatcc gagatcaaga caggaatacg cggcgtatgc
361 gacgactggc caacaccaca accggttggt gattatcctc gtccaccatc caaatcgaaa
421 tcctcgacca taccgctcgc catccactcc gatctgaatg ctgtccttac catttttgcc
481 gtgagatcac gcagccaaag atacaaaagc caagccactg caccgcggcc aaaacgaagt
541 acaacacagc cacaacgaaa tatctaatta tttgtattcc atccacccac cgcgcccgcg
601 gatgtttact gtatgggaag cgccttatag cgtagcgctg ccttctgatt gcgtttccgt
661 tcgatcaaca cagaacggaa ggagggcggc gtcagtgtaa actgggcata cactttggtt
721 tggttcctcg ctcttctgtt tggatttaat tagccgctag attggaagat tgcttgatga
781 gatgaggcgg ggtggcttat cgaacccaaa gggtaaacaa aaatgtgtgc tgggagcagc
841 ttccgctgcc atagtcggag ggcgaggcga ggcctcttcg ctggccctgt cggtggcatc
901 aagctcaaag cgcaagcaac gttcgctgag cgcggtgtgg taccagccca agatacagat
961 tctctagcgg atttctctag ataaaaaggg taactttatt gccttcgcga taactaaagc
1021 tatacagaaa gtgtcgtgtg tgttttgttt ttgtgttgtg tgtgtgtgtg caagtggaag
1081 tggaagtgaa tgagatgcga gt