PREDICTED: Drosophila obscura trypsin (LOC121403885), transcript
LOCUS XM_041591963 1710 bp mRNA linear INV 14-MAY-2021
variant X1, mRNA.
ACCESSION XM_041591963
VERSION XM_041591963.1
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1710
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1710
/gene="LOC121403885"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 10 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 5 samples with support for all annotated
introns"
/db_xref="GeneID:121403885"
CDS 137..1189
/gene="LOC121403885"
/codon_start=1
/product="trypsin I-P1 isoform X1"
/protein_id="XP_041447897.1"
/db_xref="GeneID:121403885"
/translation="MDTPWQLQVLLQMLLSWTLAANGHRELFPSLRQGTTASSSATTT
LNVLSDAGKFVMLPKVVGGYSITIEQVPFQLSVRRRTMHERAYGLGLICGGALISQRV
ACSAAHCYAVNNTHNPVRYHDPTMFVVVAGSTQIDQADRHTKEYLVQQIIAHSAYNAS
SLENDIALLFLNGYVSWQSRAVRAIPLATKAQTEGTTCLINGWAANLFPKVGKSASLQ
QAPVPILNKSLCRAIYMLPVSQLCAGFMQGGIDACQGDSGGPLICDGQLAGIISWGVG
CADPGFPGVYTNVSHFVDWIQMVNATLDYSKYTVVGSADLASGAQRTWWLALAFLLIA
LGGSWSGGWNLNWNWG"
misc_feature 314..1033
/gene="LOC121403885"
/note="Trypsin-like serine protease; Many of these are
synthesized as inactive precursor zymogens that are
cleaved during limited proteolysis to generate their
active forms. Alignment contains also inactive enzymes
that have substitutions of the catalytic triad...; Region:
Tryp_SPc; cd00190"
/db_xref="CDD:238113"
misc_feature 314..316
/gene="LOC121403885"
/note="cleavage site [active]"
/db_xref="CDD:238113"
misc_feature order(458..460,629..631,905..907)
/gene="LOC121403885"
/note="active site"
/db_xref="CDD:238113"
misc_feature order(887..889,950..952,956..958)
/gene="LOC121403885"
/note="substrate binding sites [chemical binding]; other
site"
/db_xref="CDD:238113"
ORIGIN
1 gaacatcgat acatccatca gctacccggc agcttgaaag gcaaaacttt gtttacgttt
61 tgttattgag ctttagttga gctaaacaaa caaaacaaaa acagggtgcc gtgaagattt
121 gtatggaatt attacgatgg acacaccgtg gcagctgcag gtgctcttgc agatgcttct
181 atcgtggaca ttggcggcca acgggcatcg tgagttgttt ccctctctcc gccagggcac
241 aacagcctcc tcctccgcca caacaactct aaacgtgctc tccgatgcag gcaagttcgt
301 gatgctgccg aaggtggtgg gcggctattc gataacgatc gaacaggtcc cgttccagct
361 gtcggtgcgt cgccggacga tgcacgaaag ggcatacgga ttgggcctca tctgtggcgg
421 ggcattgatc tcgcagcgtg tggcctgctc ggcggcccac tgctatgccg taaacaacac
481 acacaacccg gtgaggtatc acgatccgac catgttcgtg gtggtggcgg gcagcacaca
541 aatcgaccag gccgacaggc acaccaagga gtatctggtg cagcaaatca tcgcccacag
601 cgcctacaat gcctcctcgc tggagaacga catcgcgctg ctcttcctca acggctacgt
661 gtcgtggcag tcgagggccg tgcgagccat tccgctggcc accaaggccc agactgaggg
721 caccacgtgc ctgatcaatg gctgggctgc gaatctcttc ccgaaggtgg gcaaatcggc
781 atcgctgcag caggcgccgg tgcccatcct gaacaagagc ctctgccgtg ccatctacat
841 gctgccagtg tcccagctgt gcgctggctt catgcagggc ggcatcgatg cctgtcaggg
901 tgactctggc ggtcccctaa tctgcgacgg ccagctggcg ggcatcatct cgtggggcgt
961 gggctgtgcg gatcccggct ttcccggcgt ctataccaat gtctcgcact ttgttgattg
1021 gatccaaatg gtaaacgcca cgctcgacta ctccaaatac acggtggtgg gctcggcgga
1081 tctggccagc ggtgcccaac gtacctggtg gctggccttg gcatttctgc ttatcgctct
1141 gggcgggagc tggagcgggg gctggaactt gaactggaac tggggctgat gatgtgcggg
1201 ccaagatatg gaatgttgga cagcaataat aaaatcatca ttcagcttgt ctcttctgtc
1261 atttaataat ctaatcatct ccgcatacgc acttgtgtat cgattgccca accatagata
1321 cagaaatcga attgccgtat gactaaaagg gtgacacaat aaccaatttt aatcagccac
1381 aaggactggg acagggagtg ggactgggac tgggagtgtt gcgcctgccc ctcaagatca
1441 aagaccgaga aaacccaacg acctacacct acctccaaga cccaacaaat atcgttttaa
1501 ctgctcgatt ctgtgggttc caatagataa tatttattaa cggataagag cgcattcaat
1561 atatctgatt gttatctgat gatatgccaa atcaaatcat aattggatca taaatatgta
1621 cagacaatac gagaatgaac cgaaaagtac aaacctcctt ttggattttt gattgttgca
1681 attgccgagc ctcgaacctc ttcaaaatat