PREDICTED: Drosophila obscura uncharacterized LOC111072468
LOCUS XM_041591950 2413 bp mRNA linear INV 14-MAY-2021
(LOC111072468), mRNA.
ACCESSION XM_041591950
VERSION XM_041591950.1
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq; corrected model.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
internal stop codons :: corrected 1 genomic stop codon
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..2413
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2413
/gene="LOC111072468"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 3 Proteins, and 98% coverage of
the annotated genomic feature by RNAseq alignments"
/db_xref="GeneID:111072468"
CDS 364..2154
/gene="LOC111072468"
/note="The sequence of the model RefSeq protein was
modified relative to its source genomic sequence to
represent the inferred CDS: substituted 1 base at 1
genomic stop codon"
/codon_start=1
/transl_except=(pos:478..480,aa:OTHER)
/product="LOW QUALITY PROTEIN: uncharacterized protein
LOC111072468"
/protein_id="XP_041447884.1"
/db_xref="GeneID:111072468"
/translation="MLKHASNASSASASASATAPTTTTGPLPVPPVTQYQQQXNNNSS
SNNGNGNGSSGSGNNTPSVPVGVAAAAAVAVAGGTTTTTTNGSVSGTAAAGAGSPTPA
AAALASTARNIHLRPPQPQPLNISGLNASTCSTLLNGGCRVANAASNLLNIAMPTTPT
PLKPLTPLTPLTPNGHCNSNGSLHHHTYTNQHILASSHQQQQQQQQQQQQQQILPLPA
QPKLSHSLMQPQSPQPQHLSQLQQHNYSNCNNLTGNPPMLQKLSKPGPSPREALTSLG
LLCLSSLLLALLSLIFLLKISPNGREDALSRGVSSEDFIIVYDVTLALCALSLSLNLC
CLLVCAIQFLFAVKLRSPAFEGRDNKYLEKSSASRTCAVSGFFISIPVFLTGIILYTF
NHFHSTPAIITSVLIGVGIVFCGGAMVHNVFVWQKEKTISYRSAPLHGTLVGSLPHNM
SLLSAAQLPLPLPLPLPLPPVQFHAGSPPPPAPHQMQLYQGNHACMLQPTSVTPVSPN
HSHGSFNPLLCNNIMGGGGGGGGGGGAINSSFLVRPSTATPPTPKPLGGGSGSCLVGR
EASGSVSPGIPPTLDMSNITISLHELSTLV"
misc_feature <1276..1665
/gene="LOC111072468"
/note="Region: Jiraiya; pfam15038"
/db_xref="CDD:464461"
ORIGIN
1 agataacagc actggccgaa aattcattgg caattttaaa tctaactgaa aggaaattct
61 agctggccaa gtggaaattt ggtgtttaaa ttaatgttcg ttaattattg ataaggcact
121 gtgtgtggtg tttccatcca gccgttatga tcgtagaaac ataagataga aatcgttgca
181 tcttgggttc atttggaatc atcatccatc atatccatcc cagccatcca tcccatccaa
241 tccacctgct cgttcggttc gtttcgctcc gctccgctca gaatgtgcag cgccgctgag
301 tcggatgcaa acgtggcgcc atctagcgag cgttgaaccg catttgaagc caatttacag
361 gaaatgctga aacacgcctc caatgcgagc agtgcctctg cctccgcctc cgccaccgcc
421 cccaccacta ccaccggccc gctgcccgtg ccaccagtta cacagtacca gcagcagtaa
481 aacaacaaca gcagcagcaa caacgggaac gggaacggaa gcagtggaag cggcaacaac
541 acaccctccg ttccagtagg ggtagcagca gcagcagcag tagcagtggc aggaggaaca
601 acaacaacca ccacgaatgg ctctgtgtca ggcactgcgg cagccggggc aggttcgcca
661 acacccgcag cagctgcctt ggccagcacg gcacgcaaca ttcacctgcg accgccacag
721 ccacagcccc tgaacatatc cggtctgaat gcatccacct gcagcacgct tctgaatggc
781 gggtgccgag tggcaaatgc ggcctccaat ctacttaaca ttgccatgcc aactaccccc
841 acgccactga aaccgctgac gccactgacg ccactcactc ccaacggaca ctgcaacagc
901 aatgggagcc tgcaccatca cacctacacg aatcagcaca tcctggccag cagccaccaa
961 cagcaacagc agcaacagca acagcagcaa cagcaacaga tactgccgtt gccggcacag
1021 ccgaagttgt cccactccct gatgcagcca caatcgccgc agccgcaaca tctcagccaa
1081 ctgcagcagc acaattacag caactgcaac aatctgacgg gaaatccgcc gatgctccag
1141 aagctgtcca agccaggacc gtcgcctcgc gaagccctca ccagcctggg tctgctctgc
1201 ctgagttccc tgctgctggc gttgctctcg ctgatctttc tgctgaagat ctcgccgaat
1261 gggcgcgagg atgccctgtc caggggcgtg agcagcgagg attttatcat tgtttacgac
1321 gtgacactgg ccctgtgcgc cctgtcgcta tccctgaatc tctgttgcct gctcgtctgc
1381 gccatccagt tcctgtttgc cgtcaagctg cgttcgcccg ccttcgaggg gcgcgacaac
1441 aagtatctgg agaaatcgag tgccagtcgc acgtgtgcgg tgagcggatt cttcatctcc
1501 attccggtat tcctcaccgg catcatcctc tacaccttca atcactttca ctctacgccc
1561 gccatcatca ccagcgtcct gatcggcgtg ggtatcgttt tttgcggcgg cgccatggtc
1621 cacaatgtgt tcgtgtggca gaaggagaag accattagct atcggagcgc tccgctgcat
1681 gggactcttg tgggatccct gccacacaac atgtcgctgc tgtcggcagc ccagctgcct
1741 ctgccgctgc cactgccact tcccctgccg cctgtacagt tccatgctgg ctccccgcca
1801 cccccggccc cgcaccaaat gcagctgtac cagggcaacc atgcctgcat gctgcagccc
1861 acctcggtga ctcctgtctc accgaatcac tcgcacggca gcttcaatcc cctgctgtgc
1921 aacaacatca tgggcggcgg aggtggaggt ggaggaggag gcggagccat caattcctca
1981 tttcttgtcc gaccgtctac agcaacacca cccacgccga agcccctagg cgggggttcc
2041 ggaagctgtc tggtgggtcg cgaggccagc gggtcagtca gtccgggcat cccacccacg
2101 ctcgacatga gcaacatcac aatctcgctg cacgagcttt ccacgctcgt ctagacgagc
2161 acaccccccc ccatccactg atgaatcagt tttagacttt agctagtaga taaatacgta
2221 gccttagacg acatccaatc caccgtacaa cgttagcctg ctgctgatgc tgctgctgcc
2281 aatgtctgtc cccttcttgc cgatttgcct tcgtttcaca aggacaactg ctgtatatat
2341 ttgtacatat ctatatattc ttaagtatcg acttggaagt gcataaatgt aattttaatt
2401 ttaaattaaa att