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LOCUS XM_041591948 5220 bp mRNA linear INV 14-MAY-2021 protein (LOC111070666), mRNA. ACCESSION XM_041591948 VERSION XM_041591948.1 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5220 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..5220 /gene="LOC111070666" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:111070666" CDS 76..5067 /gene="LOC111070666" /codon_start=1 /product="polyhomeotic-proximal chromatin protein" /protein_id="XP_041447882.1" /db_xref="GeneID:111070666" /translation="MKHAPRHRTRSKADTQTALSPQTGGATTLPLKDTSNISEKSLIA KEPQRPLQCLETLAQKAGISFDDSLDVTQQQATPTTKRRKGNGNENGEGAAGEGAGTP RTTRRTRTPSVTPQHARHNSNSSSSHSHTMEKSQSPAQQVASATTVPLQISPEQLQQF YASNPYAIQVKQEFPTHTAGTTTTELKHATGLLDASQASQLQQMQLQQLTAAAADAAG GNGSAGGGGGAQGGGAPSPANQQGQQQQQQQHSTAISTMSPMQLAAATGGVTGDWSQG RTVQLMQPSTGLFYPPMMISGNLLHSAGLGQQPIQVITAGKPFQGNGPQMITTTTQNA KQMIGAQGGFAGGTYAIPSSQSPQTLLISPVNVISHSPQQQQSLLQSMVAQQQQQQQQ LNAQQQQLTAQQAVAMAKAGVGVGVGADAQGKMQAQKVVQKVTTTTNTVQAASAGAGG AQSQQQQQQQTTTQQCVQVSQSTLPGVGVGVGVGGQLLNPLGGAGAGQAQQMQLGPWF WQNGLQPFGSNSIILRGQPDGTQGMFIQQQPTTQTLQTQQNQIIQCNVTQTPTKPRTQ LDALASKQQQQQQQQQQQAAANSQAQQQQQQQQQQQQQLAVATAQLQQQQQQLTALQR PGAPIMPHNGTQVRPASSVSTQTAQNQNLLKAKMRNKQQPVRPALPALKTENGQVVAV GAVQSKAVGQHMAAVQQQQQQHQQQQQANLHQVVTTAGNKMVVMSTGTPITLQNGQTL HAATAAGVDKQQQQQQQLQLMQKQQFLQQQMFQQQIAAIQIQQQAAAQQQQQQQVAQQ QQQQQQQHQQQQQQQQQAVAQAQQDQRQQVAQAQAQAQVQAQQHQQQQALAQQILQVA PNTFITSHQQQQQQLHNQLLQQQLQQQAQAQVQAQVQAQAQQQQQQREQQQQNIIQQI VVQQAAGAGQQQQQQQQQQQQQQQTQPAQLQLSSVPFSVSSTTTPAGIATSSALQAAL SASGAIFQTAKSTSSSSSLPTSSVVTISNHTTGPLVTSSTMAASIHQAQLQQQQHQQQ QQQQQQQQQQQQQQQHQLISASIAAATQQQQQQQQQHQQQQQQQGPPALAAASPSPAT NPIMAMTSMMNATVGPVTSSGVMSSPATLVAFSAASGGSHPATPTKETPLKMSTPTAT LVPIGSPLNSSATSQDHQPSSVNTTPRSAANASASASATAEASSSTSDSSRVNGEAPE ASHSSSSTTTTPTKATTSTPTTRQSNVVLPTSSCSTTSSSTTSSCTTTHSGKDEGKGG AATATSISSSSAPSTPTTTTVSNGIGIGIATLARAGSTTVTTTTTTSSSSTATTTPTT TTTTTTSISNGSSNAGGKDLPKAMIKPNVLTHVIDGFIIQEANEPFPVTRQRYADKDT SDEPPKKKAAMQEEAKPCGIATATATDMVACEQCGKLEHKAKLKRKRFCSPGCARQAK TGVAGVGVGESNGMGMEMEIGGIVGVDAMALVDKLDEAMAEEKMQMQTDALQALQPEP MSLVPLSSNTEVPLVSLPVLPVMAGTPVPVPPLVAVALAVPASVALPATPSPGATPPA AAVAPQPPVPAAASSSSAAGERSPICNWSVDEVADFIRNLPGCQDYVDDFVQQEIDGQ ALLLLKENHLVNAMGMKLGPALKIVAKVESMKEVVPAPGSGEAKEATAAGGAQ" misc_feature 4798..5004 /gene="LOC111070666" /note="SAM domain of Ph (polyhomeotic) proteins of Polycomb group; Region: SAM_Ph1,2,3; cd09577" /db_xref="CDD:188976" misc_feature order(4852..4857,4957..4962,4969..4974,4981..4983) /gene="LOC111070666" /note="oligomer interface EH [polypeptide binding]; other site" /db_xref="CDD:188976" misc_feature order(4885..4899,4903..4908,4915..4920,4930..4932, 4945..4947) /gene="LOC111070666" /note="oligomer interface ML [polypeptide binding]; other site" /db_xref="CDD:188976" ORIGIN 1 tgccaacctg tttgcattgt acattgtatt tttttgtgtg agattttggg gcaacaagag 61 agattatacc ccaagatgaa gcatgccccg cgccatcgta cccgttcaaa agcggacacg 121 caaacagcat tgtcacccca gacaggagga gccaccacgc tacccctcaa ggacacatcg 181 aacatcagcg agaagtcgct gatcgccaag gagccacagc gaccgctcca gtgcctggag 241 acacttgccc agaaggcggg catcagcttt gacgattccc tggacgtgac ccagcagcag 301 gcaaccccaa ccacaaaaag gcgaaagggc aacggaaacg aaaacggtga aggagcagca 361 ggagaaggag ctgggacacc gcgcactaca cgtcgcaccc gcactcccag tgttacccca 421 cagcacgccc gacacaacag caacagcagt agcagccaca gccacacgat ggagaagtca 481 cagagccccg cacaacaggt ggcgtccgcc acgacggtgc ccctgcagat ctcaccggag 541 cagctgcagc agttctacgc gagcaacccg tacgccatcc aggtgaagca ggagttcccc 601 acgcacacgg ccggcacaac caccacggaa ctgaagcatg cgacgggtct gctggacgcc 661 agccaggcga gccagttgca gcagatgcag ctccagcagc tgacggcggc ggcagcggat 721 gcagccgggg gaaacggttc tgcaggcggt ggaggaggag cccagggcgg aggcgcaccc 781 agtccggcga accagcaggg acagcaacag cagcagcaac agcactcgac ggccattagt 841 acgatgtcgc cgatgcagct ggcggcagcc accggcggag tgaccggcga ctggtcacag 901 ggtcggaccg tgcagctgat gcagccttcg acggggttat tctacccacc catgatgata 961 tccggcaacc tgctgcactc cgcgggcctc ggccagcagc ccatacaagt gatcaccgcc 1021 gggaagccgt tccagggcaa cggcccacag atgatcacca ccaccacgca gaacgccaaa 1081 cagatgatcg gggcgcaggg cggtttcgcc ggcggcacct acgccatccc ttccagccag 1141 tcaccgcaga cgctgctcat ctctccagtc aacgtcatct cccactcgcc gcagcagcag 1201 cagagcctcc tccagtcgat ggtcgcccag cagcaacagc agcagcaaca actgaacgcc 1261 cagcagcagc agctgacggc tcagcaggcg gtggccatgg ccaaggcagg agtgggagtg 1321 ggtgtgggag ccgacgccca gggcaagatg caggcgcaga aggtggtcca gaaggtgacc 1381 accaccacca acacggtgca ggctgcgtcg gcaggcgctg ggggggcaca gtcgcagcag 1441 caacagcagc agcaaaccac cacccagcag tgcgtacagg tctctcagtc gacactgccc 1501 ggcgtgggag tgggagtggg tgtgggcggg cagctgctga atccgctggg aggtgccggc 1561 gcgggccagg cgcagcagat gcagctcggt ccctggttct ggcagaacgg cctgcagccc 1621 ttcggctcga actccatcat cctgcggggc cagccggacg gcactcaggg catgttcatc 1681 cagcagcagc ccaccacgca gaccctccag acgcagcaga accaaatcat ccagtgcaat 1741 gtaacccaga cacctaccaa gcctcgcacc cagctggatg ccctggcttc caagcaacaa 1801 cagcagcagc aacaacaaca gcagcaggcg gcggccaaca gccaagcgca gcagcagcaa 1861 caacaacaac agcagcagca acaacagctg gctgtggcca cggcccaact gcaacaacag 1921 cagcagcagc tgacggccct gcagcgtcct ggcgcaccga ttatgcccca caatgggacg 1981 caggtgcgcc cggccagctc cgtgtccacg cagacggcgc agaaccagaa cctgctgaag 2041 gccaagatgc ggaacaagca gcagcccgtc cgtccggcat tgccggccct caagacggag 2101 aatggtcagg tggtggcggt tggtgcggtg cagagcaagg cagtgggcca gcacatggct 2161 gccgtacagc agcagcaaca gcagcaccag cagcaacaac aggcgaacct tcaccaggtg 2221 gtcaccacag cgggaaacaa gatggtcgtg atgagcacgg gcacgcccat aaccctgcag 2281 aatggccaga ccctgcatgc agccactgcg gccggagtgg acaagcagca gcaacagcag 2341 cagcagctgc agctcatgca gaagcagcag ttcctgcagc agcaaatgtt ccaacagcag 2401 atagccgcca tccagatcca gcagcaggca gcagcgcaac agcagcagca gcaacaagtc 2461 gcccagcagc aacagcagca gcaacagcaa catcagcaac aacaacagca gcagcagcag 2521 gcggtggccc aagcgcagca ggatcagcgg caacaggtgg cacaggctca ggcccaagct 2581 caggttcagg cgcagcaaca ccagcagcaa caggccctgg ctcagcaaat actgcaggta 2641 gcgcccaaca ccttcatcac ctcccaccaa cagcagcagc agcagctcca caaccaactg 2701 cttcagcagc agctccagca gcaggcacag gctcaagtgc aagctcaggt tcaggctcag 2761 gcacagcagc aacaacaaca acgggagcag cagcagcaga acatcatcca acaaattgtg 2821 gtgcagcagg cggccggggc aggccaacag cagcagcaac aacaacaaca acaacagcag 2881 cagcagcaga cgcaaccggc acaattgcag ctgagcagcg tccccttctc ggtatcctcg 2941 accacgacgc ccgcaggaat agccacctcg agtgccctcc aggccgccct ctcggcctct 3001 ggcgccatct tccagacggc caagtcgacc agcagcagct cctctctgcc caccagcagc 3061 gtagtgacaa taagtaacca cacaacgggt cccctggtca ccagcagcac gatggcagcc 3121 agcatccacc aagcccagct ccagcagcag caacaccaac agcagcagca gcagcagcaa 3181 caacagcagc agcaacaaca gcaacagcaa catcagttaa tctccgccag cattgcagcg 3241 gccacacagc agcagcagca acagcagcag cagcatcaac aacaacaaca acagcaggga 3301 ccacccgctc tggcggctgc atcgccctca cccgccacga accccatcat ggccatgaca 3361 tccatgatga acgcgactgt tggacctgtc accagcagcg gagtgatgtc ctctcctgca 3421 acgctggtcg cgttcagcgc tgccagtgga ggtagtcatc cggcgacacc caccaaggag 3481 acgccgctga agatgtccac ccccaccgcc accctggtgc ccattgggtc ccctctaaac 3541 agcagcgcca ctagccagga tcaccagcca tcgtccgtca acaccacccc cagatccgct 3601 gcaaacgcca gtgccagtgc cagtgccacc gcggaggcaa gtagctccac gagtgactcc 3661 tccagggtga atggagaggc cccggaggcg tctcatagca gcagcagcac caccaccacg 3721 cccacgaagg ccaccaccag cacgcccacc acaaggcaga gcaatgtggt gctgcccacg 3781 agtagctgca gcaccaccag cagcagcacc actagctcct gcacaaccac ccacagcgga 3841 aaggatgagg gcaagggcgg agcggctact gccaccagca tcagcagcag cagcgcacct 3901 tcaacgccga ccacgacgac agtcagcaac gggattggga ttgggatagc caccctggcc 3961 agggcaggga gcaccactgt gaccaccacc acgacgacca gcagcagcag cactgcgacg 4021 actacaccca caactacaac tacaacgaca acgagcatca gcaatggcag cagcaacgcg 4081 ggagggaagg atctgccgaa ggccatgatc aagcccaatg tgctgaccca tgtcatcgac 4141 ggattcatca tccaagaggc caacgagccc ttccctgtta cgaggcagcg ctatgctgac 4201 aaggacacga gcgacgagcc gccaaagaaa aaggctgcca tgcaggagga ggcgaagcca 4261 tgcggcatag ccaccgcaac tgcgacggac atggtggcct gcgagcagtg cggcaagctg 4321 gagcacaagg cgaagctcaa gcggaagcgc ttctgctccc caggctgcgc caggcaggcg 4381 aagactggcg tcgcaggagt aggagtagga gagagcaatg gaatgggaat ggaaatggaa 4441 attggaggaa ttgtgggagt ggatgccatg gcgctggtgg acaaactgga cgaggccatg 4501 gccgaggaga agatgcagat gcagacggac gcactgcagg cgctgcagcc cgaaccgatg 4561 tcccttgtgc cattgtcaag caacacggag gtgccactgg tgtcccttcc tgtcctgcca 4621 gtcatggcag gcacccccgt tccagtgcct cccctagttg cagtcgcact cgcagttccc 4681 gcttccgtgg cgctgcctgc gactccgtct ccgggtgcca caccaccagc tgcagcggtg 4741 gcgccccagc caccagtacc agcagcagca tcctcctcga gcgcagcggg cgagcgttcg 4801 cccatctgca actggagcgt ggacgaggtg gctgacttca tacggaacct gccaggctgc 4861 caggactatg tggacgactt tgtccagcag gagatcgacg gccaggcgct gctgctgctc 4921 aaggagaatc acctggtgaa tgccatgggg atgaagctgg gccccgccct caagattgtg 4981 gccaaggtgg agtccatgaa ggaggtggtc ccggcgccgg gctctggcga ggccaaggag 5041 gcaacggccg cgggaggagc tcaataatac cagcctgatg ttccagccga tgccattgcc 5101 gatgcagatg acgaggacat tcccatgccc tcctactcga catctccgcc accattctcg 5161 cttctccgtc tccggcttac gtacggatcg aggcaacaga gggaattgcc agagggaact