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LOCUS XM_041591945 3725 bp mRNA linear INV 14-MAY-2021 (LOC111072429), transcript variant X5, mRNA. ACCESSION XM_041591945 VERSION XM_041591945.1 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3725 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3725 /gene="LOC111072429" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns" /db_xref="GeneID:111072429" CDS 170..3478 /gene="LOC111072429" /codon_start=1 /product="homeotic protein female sterile isoform X5" /protein_id="XP_041447879.1" /db_xref="GeneID:111072429" /translation="MSSNEPPPRYEPPVEPVNGIVQPAVVPPVDRPGRNTNQLQFLIK TVMKMIWKHHFAWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETI HDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQKIETMPKEELELEPATAKGGKKKAR APATPKSGSGGGGGTGSSTGAAVANSNTGSSNSGSINKVAPSAQQLPIMGSGLAAQST GAGGHGSATGSGTTSRPVSAMGGTVSSTAGGGGAPSIPPISTMPPHTVPGSTNTTTTA TTMVDAIIASLRNPSQAAYPGATQAAANSSSLLDGSSSAAASAAATTAAATAAAAAAA AAAAAAAAASSSGGGAGAPGTVSTAGGVTIPSVNTTTNVHSSYVNSTAGVGVGVDAVI PPQQPAKMKKGVKRKADTTTPTANAFESPYAQMDSKSAKIATRRESNRQGSGYAMSPS MGVVPGLAAGVAASVAAAKSKEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVDAEM LGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAM GRKLQDVFEMRYANIPDEPVSNAAHHHAHTHGHGHGHGHGQSHGHGHGHGHGGYSSAS LKHDGSDSSSEDSSGTENESNSDEERSAKLKMLESKLLGLQEEIRKLSEEASAKKKAK KKLKEKKKSIGGGSGSGSASHHAHASAGGGAGGPSASHGGVSVPASVVALSAGGAAGP NLSALLSGSLVGASGAGGGVPNVSALHSLAHDMTLAMNQLTGNAAATGAGFTAGIPPP GPAPGGKGANMASAMAAAGAGPGASGGTGGSSKSKSKGQRGKGSSSNAGAGGASSGVT VNAGSGIGGAGAASSAGSGGGSGTTGPSGNSSKRGKGSSSAGGGGGGSSGSAANTTSA TGAGARGSSKKKPSQVMNFDSEEEDTAKPMSYDEKRQLSLDINKLPGDKLGRVVHIIQ NREPSLRDSNPDEIEIDFETLKPSTLRELESYVASCLRKKTRKPCYKKPSGKSKDEQM AEKKQELEKRLQDVTGQLGASKKNAKKDDSTSNKVEAVQPANPVSSSSSSSDSSSSSS SDSSSSDSSDSEAG" misc_feature 269..589 /gene="LOC111072429" /note="Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino...; Region: Bromo_Brdt_I_like; cd05497" /db_xref="CDD:99929" misc_feature order(356..358,377..379,386..388,503..505,515..517, 533..535) /gene="LOC111072429" /note="acetyllysine binding site [active]" /db_xref="CDD:99929" misc_feature 1601..1903 /gene="LOC111072429" /note="Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino...; Region: Bromo_Brdt_II_like; cd05498" /db_xref="CDD:99930" misc_feature order(1679..1681,1700..1702,1709..1711,1826..1828, 1838..1840,1856..1858) /gene="LOC111072429" /note="acetyllysine binding site [active]" /db_xref="CDD:99930" misc_feature 2996..3190 /gene="LOC111072429" /note="Bromodomain extra-terminal - transcription regulation; Region: BET; pfam17035" /db_xref="CDD:435704" ORIGIN 1 agcagcagca gcagtacaac cagcatccac ttgaggatca gataccttaa aagcaaccgc 61 aacaggagca gggacaaaag caacaaccag aagcctcatc atcagccaac aggaggagca 121 gcagtagccg cagcaccact gtgtcaccat catcaccatc atcaacaaca tgtcgtccaa 181 cgaaccacca cctcgctacg agccgcctgt ggagccggtc aatggcattg tgcagccagc 241 ggttgtgcct ccagttgatc gacccggccg caatacaaat caattgcaat tcttgatcaa 301 aaccgtaatg aagatgatat ggaaacacca ttttgcgtgg cccttccagc agcccgtcga 361 cgcgaaaaag ctcaacctgc ccgactacca caagatcatc aagcagccga tggacatggg 421 aacgatcaag aagcgactgg agaacaacta ttactggtcg gcgaaggaga ccatccatga 481 cttcaatacc atgttcaaca actgctatgt ctacaacaag cccggcgagg atgtggtcgt 541 gatggcccag acgctggaga aggtattctt gcagaagatc gagacgatgc ccaaggagga 601 gcttgaactg gagccggcca cggccaaggg tggcaagaag aaggcacgtg ccccggccac 661 gcccaagtct ggatcaggag gcggaggtgg aacgggatca agcacgggtg cagctgtcgc 721 caatagcaac actggcagca gtaacagcgg atctatcaat aaggtagcac catcggccca 781 acagttgccc atcatgggca gcggcctggc ggcacagtca acgggtgcag gaggccatgg 841 atcagcgacg gggtcgggga caacatcccg acccgtatca gcgatgggcg gaacggtttc 901 atcgacggcc ggcggcggcg gtgcaccgtc cataccaccg attagcacaa tgcctccgca 961 cacagtcccc ggcagcacca acaccacgac gacggccacg acaatggtcg acgccattat 1021 agccagcctt cggaatccca gccaggccgc atatccgggc gctacccagg cggcggctaa 1081 cagctcctcc ctactggacg gcagcagcag tgcggcagca tcggcggcgg caacaacagc 1141 agcggcgacg gcagcagcag cggcagcagc agcagcagcg gcggcggcag cagcagcatc 1201 atcatctggc ggtggagcgg gagctcccgg tacagtcagt acggcgggtg gtgtgacaat 1261 accatccgtc aataccacca ccaatgtgca ctcctcctac gtgaacagca cggcgggcgt 1321 cggagttggt gtggatgcgg ttataccgcc ccaacagccg gcgaaaatga agaagggtgt 1381 caaacggaag gcggacacaa cgacgccgac ggccaatgca tttgagtcgc cctacgccca 1441 aatggactcc aagtcggcca agatagcgac gcgaagggaa tcgaatcgtc agggctcggg 1501 atatgcgatg tcgccatcga tgggtgtcgt gcctggattg gcggcgggtg tggccgctag 1561 tgtggcggcg gccaagtcaa aggagaagct gtcggatgca ctaaagtcat gcaacgagat 1621 cctcaaggag ctgttcagca agaagcactc gggctatgcc tggcccttct acaagccggt 1681 ggatgcggaa atgctgggcc tccatgacta ccacgacatc atcaaaaagc ccatggacct 1741 gggcaccgtc aagcggaaaa tggacaatcg ggagtacaag agcgcaccgg agtttgcggc 1801 cgatgtgcga ttaatattca ccaactgcta caagtacaat ccgccagatc atgatgttgt 1861 ggccatgggc cggaagctgc aagacgtctt cgaaatgcgc tacgccaaca tacccgacga 1921 accggtctct aatgcggccc atcatcatgc acatacgcac ggacatgggc acggccatgg 1981 acacggccag agtcacggtc acgggcatgg gcatgggcac ggtggctatt cgagtgcttc 2041 cctcaagcac gatggcagcg actcgtccag cgaggactcc agcggcacag agaacgagtc 2101 gaactcggac gaggagcgca gcgccaagct gaaaatgctc gagtccaagc tgctcggtct 2161 ccaggaggag atccgaaagc tctccgagga ggcctccgca aagaagaagg ccaagaaaaa 2221 actcaaagag aagaagaaga gcatcggtgg gggctctggt tccggctcgg cctctcatca 2281 tgcccatgcc tcggctggtg gtggcgcagg tggtccgtcc gccagccatg gtggcgtctc 2341 tgttccggcc agcgtcgttg ccctatcggc gggcggagca gcgggaccca acctatcggc 2401 cttactcagc ggttcgctgg tgggcgcgag cggagcgggc ggcggagtgc ccaacgtctc 2461 ggcccttcat tcactcgccc acgacatgac ccttgccatg aaccaactga cgggcaatgc 2521 ggcagcgacc ggagctggct ttacggccgg cataccgcca ccgggaccag cgccaggcgg 2581 caagggggcc aacatggcca gcgccatggc tgcggcggga gcgggaccag gggcttctgg 2641 gggaaccggc ggcagcagca aatcgaagag caagggccag cgcggtaaag gaagctcgag 2701 caatgcggga gcgggcggag catcctctgg agtgacggtc aacgcgggca gcggaatcgg 2761 cggtgctggc gcagcgtcca gcgctggcag tggcggtggc agtgggacta ctggccccag 2821 cggcaattcc tcaaagcggg gcaagggtag tagtagtgcc ggcggtggtg gtggcggcag 2881 cagtggcagt gcggccaata ccaccagtgc gaccggtgcc ggagcgcgcg gtagcagcaa 2941 gaagaagccc agccaggtga tgaactttga ctccgaggag gaggacacgg ccaagcccat 3001 gtcgtacgat gagaagcgac aactctcact ggacatcaac aagttgccag gcgacaagct 3061 ggggcgagtg gtgcacatta tccagaatcg ggagccatcg ctgcgggact ccaatccgga 3121 cgagatagag atcgactttg agacgctgaa gccgtcgacg ctgcgcgagc ttgaaagcta 3181 tgtggcgtcg tgtttgcgca aaaaaacacg taagccatgt tataaaaagc cttccggcaa 3241 atcgaaggat gagcaaatgg cggaaaagaa gcaggagctg gagaagcggc tgcaggacgt 3301 caccggccag ctgggtgcaa gcaagaaaaa cgccaagaaa gatgattcca cctcaaacaa 3361 agtggaagct gtgcagccag cgaatcccgt gtcgtcgagt tccagttcca gcgattcatc 3421 gtcctcgagt tcgagtgata gcagttcgag tgactcgagc gacagtgaag caggttagga 3481 cgcgttttgt ttgtttgttt taccttataa cgcctttttt ttttgttagt ttatatagac 3541 atatatacgt atgcatatat atatatatat atatatatat atataaatat gaatatatat 3601 gtatagaaac gtttttaagc agcaaataac aaaatcgaac agatcgacga cagtaaccga 3661 cagtaactta cagcttacga aactaaaagc gtgcggtaga ggaagaggaa tagcaaagca 3721 ggtag