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LOCUS XM_041591940 5614 bp mRNA linear INV 14-MAY-2021 (LOC111076898), mRNA. ACCESSION XM_041591940 VERSION XM_041591940.1 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq; corrected model. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-547 JAECWW010000165.1 808063-808609 c 548-955 JAECWW010000165.1 805396-805803 c 956-1042 JAECWW010000165.1 804647-804733 c 1043-1084 JAECWW010000165.1 804604-804645 c 1085-3560 JAECWW010000165.1 800175-802650 c 3561-5073 JAECWW010000165.1 798568-800080 c 5074-5614 JAECWW010000165.1 797957-798497 c FEATURES Location/Qualifiers source 1..5614 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..5614 /gene="LOC111076898" /note="The sequence of the model RefSeq transcript was modified relative to its source genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:111076898" CDS 548..5263 /gene="LOC111076898" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon" /codon_start=1 /product="LOW QUALITY PROTEIN: flocculation protein FLO11" /protein_id="XP_041447874.1" /db_xref="GeneID:111076898" /translation="MMEQGARKQTATTATTRNRSSASEAPSIVAPAVTCSSSTTTSSS SSSSSSATCSATIVVKQRPPPLKTATTTVTTTLVSSNEGGQPLPPIAQASYRGATATL TTPSTPRIELSRASSSSHHEEDSRESSPENVFEQETIGLGFREEGALELRSSTEELYF MDPEQKKEEQERMQQQQQQTKRSSPHIFKFDDHQSYLQQHQRKDSASSEVAALLCISG RTSRISSVGSQGSAVSRLSAVSCVSRSPSPHRMLLETSFCGPKPLEQGASSAAGSTAS TLASSSHTHAETAPGGGGVVTGAAPGGVAANTALLEQLLLARKHDPTQAVLAEGIKVL PPAPATRTSSGSNVPVMGAQRRSTKSPGQMVIGKTPSGTEYIRINLRPDHMYSDRGIA ANERVVEAPNQLTPVYSASALAAGQPKPPASLSLQGGGGGGGAGVGHDENRLTPTASP KPGRHALRLGSRSPSPSPAATSVSRKSSFSSLFRLGKDSPDSPRESARARSKSKERSS AGAPVATTTTGSSQNVTPSKQKSVLAIFKSGKRGSSAGTDGTKSSKSSSPIEPSCEPP PPPPPAPGSAGSSGGRSRTPAGSRPGSRLRYYDEPVEGVIHIPLHTPPEEREARTLLQ GIQNLIAAPSPPPIQARTPPQPPAAQSQAQQPPTASCGAVSVTGNGSGATITASQLAA AAAALRPVGQRKTVAQRPDLDAIQSLNSQEEVEKEKGWSLEVQRHSSQDSQETLQSVS SVVSARASNLAQIHQEPEPEPEAEQERDPSVRENGLGEMQRLPSVDSTQSACEPPRLV HTVATVSAPQSEDAAAKERRRLLFATRLGSGSQEQIFSTQFSISKTESQSSQLSEQVL ESANNSTASDGPATSVDGLQRQGTVIRRTEMSAVPPPPPPRGISSSEEEQPASSSSGN HPAVVLRSKHRSRPTSEDEGPGPAPAADLRHSRYLENFDVRRKLHENVPLEGKEVRRR QQHHHQPQQQPQQQESTPVPRKPKRQSVPEPRRETSQSSGGATPTTPTPTPLPAGGKT PTPTDRATPIGVATATGMGMETGMATGMETPTPTASPDPMLTSPLAERRLSQSTDEHE PVESSESERDSDMAGSSSVTTAVAVGGEGQGPGKRHHFPRNVCVIEEHESTGLVSQES FDDELPYIPTTLPEERAQGVPLIPMKERANMELKTCPVDRPRSTTPLNPSHLEEYCTG IMTPQEAPHVGVHELDNGASAAAGGGAGGAAGGGSGPLRGEKLRISLPRKESMGKEGR APGQSSKSPRRISNASGKSWFEFAEEGLRANNLERKDSSKQLLPAQGSGAVPVPVPIP MPATNPVPTPASAPPGIGLEEPKPKASTQRKLSGHWIDFENIPEKRKPAKRITTLPKE TIAASNTATTSSSSACGSGHRSGGSGSGSGPHHHHHHHHQTRPGSGSQDPNTGGASDK LHYNYVKPEDCQCECHEAERGETSMATAGAGDSSTGTGTGTGTTSDSLASVDLLQQGE DMLPLLDPEPQPETRVYTDEEAPAPTRHASKSSGVARVSLEGYAQTFRRFFGIKWIMK LLSTFHFPQLSNLWGCNQN" ORIGIN 1 ccgtcgccgt cgacgctgtg ctcattcagc gtttagcata catttcgggg ctttcggcag 61 tacgacgcta acgctgcgtg cgtgcggtct aacggtaaaa acgtgacgga gagagagcca 121 gcccccagcc aggcgtgtga agtgagggag agagagtgag agagagagcg agagagagcg 181 agagttagga ggcgaacgag aacgcgaacg ggagcgagcg aggcgaggcg agacagagga 241 agatagccag atagcagtcc gcgttaagaa gaaaatcaaa cagagcaaga aagcagcagc 301 agagggcaca aattttgttc ttaatttttt gttgttgttc agtgccaaaa aaaataatat 361 tgatggaaaa ttgataagac agagttcagc gttcaagcga taagcaaaat acacacacac 421 acacaaacac gctcaaacac acgctcacac acacacacac ccgcgctcac acgcgaaccc 481 gcgaaggagg agtaaaaaca gcagagaagc agcgtaacgg catctagtta tattttttgg 541 gtccgcgatg atggagcaag gtgcacggaa acagacagcg acaaccgcaa cgacgaggaa 601 tagaagcagc gccagcgaag cacccagcat tgtggcaccg gcagtcacct gcagcagcag 661 caccaccaca tcctcctcat catcatcatc gtcgtcggcc acctgctcgg cgacgattgt 721 ggttaagcag cggccgccac cactgaagac ggccacgaca acggtgacca cgacattggt 781 cagcagcaat gagggcggcc agccgctgcc acccattgcc caggccagct accggggtgc 841 cacggccacc ctgaccacac cctcaacgcc acggatcgag ctgagccgcg cctccagctc 901 gtcccatcac gaggaggata gccgtgagag cagtcccgag aatgtcttcg agcaggaaac 961 gattggcctt ggctttcggg aggagggcgc tttggagcta cgcagctcca ccgaggagct 1021 gtacttcatg gatccagaac agaaaaagga agagcaggag cgcatgcaac agcaacagca 1081 gcagacgaag cgctcctcgc cgcacatctt caagtttgac gaccaccaga gctacctgca 1141 gcagcaccag cgcaaggact cggccagctc ggaggtggcc gctctgctct gcatctcggg 1201 ccgcaccagt cgcatctcga gcgtcggcag ccagggttcg gccgtgagcc gcctctccgc 1261 cgtttcctgc gtctcgcgct cgccctcgcc ccatcgcatg ctgctggaga cctccttctg 1321 cggtccgaag ccactcgagc agggtgccag cagtgccgcg ggaagcactg cctccacgct 1381 ggccagctcc tcgcacactc acgcagagac cgcgccgggt ggtggcggcg ttgtgacggg 1441 tgcagcgccc ggaggtgtgg cggccaatac agcgctgctg gagcagctgc tgctggcccg 1501 caagcacgat cccacccagg cggtgctggc cgaaggcatc aaggtgctgc cacctgcccc 1561 ggccacacgc accagcagcg gcagcaacgt cccggtcatg ggcgcgcagc gcaggagcac 1621 caagagcccc ggccagatgg tcatcggcaa gacacccagc ggcacggagt acatccgcat 1681 caatctgcgg ccggaccaca tgtacagcga cagaggcatt gcggccaacg agcgggtggt 1741 agaggcgccc aaccagctca cgcccgtcta ctccgcctcc gctttggccg ccggacagcc 1801 caagccaccc gcctcgctca gcctgcaggg gggtggcggt ggcggtgggg ctggggtcgg 1861 tcacgacgag aaccgcctga caccgacggc gagtccgaaa cccggccggc atgccctgcg 1921 cttgggcagt cgctcgccct caccctcgcc ggcggctact tctgtgtccc gcaagagctc 1981 cttcagctcc ctcttccggc tgggcaagga ctcgccggac tcgccgcgag agtccgcccg 2041 agcgcgcagc aaaagcaagg agcgctcctc agcgggcgcg cctgtggcga caacgacaac 2101 cggctcctcc cagaatgtga cgcccagcaa gcaaaagtcc gtgctggcca tcttcaagtc 2161 gggcaagcgg ggcagcagcg ccggcaccga tggcaccaag agctccaaga gttcctcgcc 2221 catcgagccg agctgcgagc caccgccgcc gccaccaccg gcacccggat cggccggatc 2281 atcgggcgga cgcagccgca caccggctgg ctccaggccg ggcagccggc tgcggtacta 2341 cgatgagccg gtggaggggg tcatccacat accgctgcat acgccgccag aagagcgcga 2401 ggcccgcacc ctgctgcagg gcattcagaa tctgattgca gcgccctctc cgccgcccat 2461 ccaggccagg acaccgccac agccaccagc agcacagtcg caggcgcagc agccgccgac 2521 cgcctcctgt ggcgccgtgt ccgtaaccgg caacggatcc ggagccacca tcacggccag 2581 ccagttggcg gcggccgccg ctgccctgcg acctgtgggc cagcgaaaga cggtggccca 2641 gcgtccagac ctggatgcca tccagtcgct caactcccag gaggaggtgg agaaagagaa 2701 gggctggagt ctggaggtgc agcggcacag ctcgcaggac tcgcaggaga cactgcaatc 2761 ggtgagctcc gtggtgagtg cacgggcctc caacctggcc cagatccacc aggagcccga 2821 gcccgagccg gaggccgagc aggagcggga cccttcagtg cgggagaacg ggctggggga 2881 gatgcagcgc ctgccctcgg tggacagcac gcagagtgcc tgcgagccgc cgcgcctggt 2941 gcacacggtg gccaccgtca gtgcgcccca atccgaggat gcggcggcca aggagcgccg 3001 ccgtctgctg ttcgccacgc gactcggctc cggcagccag gagcagatct tctccacgca 3061 gttcagcatc tcgaagacgg agagccagtc cagccagctg tccgagcagg tgctcgagtc 3121 cgccaacaac tcgacggcat cggacggacc ggcgacctcc gtcgacggac tgcagcggca 3181 aggcactgtc attcggcgca cggagatgag cgccgtgcca ccaccgccac caccacgcgg 3241 catctccagc tccgaggagg agcagccggc cagcagcagc agcggcaacc atccggcagt 3301 cgtgctgcgc tccaagcaca ggtcgcgtcc cacttccgag gatgagggtc cgggcccggc 3361 cccggcggcg gatctgcgcc attcgcgcta cctggagaac ttcgatgtgc gccgcaagct 3421 gcatgagaat gtgcccctag aagggaagga ggtgcgccga aggcagcagc accaccacca 3481 gccccagcag cagccccagc agcaggagag taccccagtg ccacggaaac ccaagcgaca 3541 gagtgtcccc gagccaagac gtgaaacctc gcagagctct ggcggtgcca cgcccactac 3601 tccaacaccc acacccttac ccgctggcgg caaaacaccg actccaacgg acagagccac 3661 gcccattgga gttgcaactg caacgggaat gggaatggaa acgggaatgg caacgggaat 3721 ggaaactcca acgccaacgg ccagcccgga cccgatgctc acctcgccac tggccgagcg 3781 gcgtctctcg cagtcgacgg acgagcacga gcccgtggaa tcgtcggaga gtgaacgtga 3841 ctccgatatg gctggcagct cgtcggtcac gacagcagtg gccgtgggcg gggaggggca 3901 gggtccgggc aagcggcacc actttccgcg caacgtgtgc gtaatcgagg agcacgagag 3961 caccggcctg gtgtcgcagg agtccttcga cgacgagctg ccgtatatac cgacgacgct 4021 gccggaggag cgggcgcagg gcgtgccgct gataccgatg aaggagcggg ccaacatgga 4081 gctgaagacc tgtcccgtgg acaggccgcg ctccacaacg cccctcaatc cctcgcacct 4141 ggaggagtac tgcacgggca tcatgacgcc ccaggaggca ccgcatgtgg gagtccatga 4201 gttggacaac ggagcatcgg ctgcagcagg aggaggcgca ggaggagcgg ctggtggtgg 4261 tagtggtcct ttgaggggag aaaagctccg catcagtctg ccgcgcaagg agtcgatggg 4321 taaggagggc cgggcaccgg gccagagctc aaagtcgccg cgacgcatct ccaatgccag 4381 cggcaagtcg tggttcgagt tcgcggagga gggactgcgc gccaacaatc tggagcgcaa 4441 ggactccagc aaacagttgc tcccagctca aggttcaggt gcagttccag ttcccgttcc 4501 cattcccatg cccgccacca atccggttcc aactccagcc tctgctccac ctggcatcgg 4561 gctggaggag cccaagccga aggcatccac acagcgaaag ctgtccggcc actggatcga 4621 ctttgagaac atcccggaga agcgcaagcc ggccaagcgg ataaccacgc tgcccaagga 4681 gacaatagcg gccagtaaca cggccacaac aagctcctcc tcggcgtgcg gcagtggcca 4741 tcggtctggt ggctctggtt ccggttcggg gccacatcat catcatcatc accaccacca 4801 gacgcggccg ggatcaggat cgcaggatcc gaacactgga ggagccagcg ataagctgca 4861 ctacaactat gtgaagccgg aggactgcca gtgcgagtgc cacgaggccg agcgcggcga 4921 aacctccatg gccacagcgg gcgccgggga cagcagcacg ggaacgggca cgggcactgg 4981 aacgaccagc gactccttgg catctgtgga cctgctgcag cagggtgagg acatgctgcc 5041 gctgctcgat cccgagccac agccggagac cagagtctat acggacgagg aggcgcctgc 5101 cccaacgcgg catgccagca aaagcagcgg tgtagcacgg gtgagtttgg aaggatatgc 5161 tcaaaccttc cgaaggtttt ttggcatcaa atggattatg aaattacttt ccacattcca 5221 ttttccgcaa ctcagcaatc tgtggggatg caatcaaaac taaccccaaa cttttgtcct 5281 acccaatcca cagacccaaa tggaggagtt tccccgacgc gacatcggat cgagtccacg 5341 caatcgaaaa tttcccgata gaaagtaaga tgagcaatta gctcgcattg gatacagatt 5401 ggagtcatgg gttgatggct catggctcaa ggctcaaggc tcatggtaga tcttcagggt 5461 agctacacca gtaatctttc tatatgtgta agtcgactca ctaaactaag ggcctaagca 5521 gtgtgcgtgt cctcttggcc tatatcctta atgtacctca agcagtgtgg ttgttataag 5581 cagagacgaa cgacgcgacg atcgatcaaa gtac