PREDICTED: Drosophila obscura flocculation protein FLO11
LOCUS XM_041591940 5614 bp mRNA linear INV 14-MAY-2021
(LOC111076898), mRNA.
ACCESSION XM_041591940
VERSION XM_041591940.1
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq; corrected model.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
frameshifts :: corrected 1 indel
##RefSeq-Attributes-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-547 JAECWW010000165.1 808063-808609 c
548-955 JAECWW010000165.1 805396-805803 c
956-1042 JAECWW010000165.1 804647-804733 c
1043-1084 JAECWW010000165.1 804604-804645 c
1085-3560 JAECWW010000165.1 800175-802650 c
3561-5073 JAECWW010000165.1 798568-800080 c
5074-5614 JAECWW010000165.1 797957-798497 c
FEATURES Location/Qualifiers
source 1..5614
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..5614
/gene="LOC111076898"
/note="The sequence of the model RefSeq transcript was
modified relative to its source genomic sequence to
represent the inferred CDS: deleted 1 base in 1 codon;
Derived by automated computational analysis using gene
prediction method: Gnomon. Supporting evidence includes
similarity to: 1 Protein, and 98% coverage of the
annotated genomic feature by RNAseq alignments"
/db_xref="GeneID:111076898"
CDS 548..5263
/gene="LOC111076898"
/note="The sequence of the model RefSeq protein was
modified relative to its source genomic sequence to
represent the inferred CDS: deleted 1 base in 1 codon"
/codon_start=1
/product="LOW QUALITY PROTEIN: flocculation protein FLO11"
/protein_id="XP_041447874.1"
/db_xref="GeneID:111076898"
/translation="MMEQGARKQTATTATTRNRSSASEAPSIVAPAVTCSSSTTTSSS
SSSSSSATCSATIVVKQRPPPLKTATTTVTTTLVSSNEGGQPLPPIAQASYRGATATL
TTPSTPRIELSRASSSSHHEEDSRESSPENVFEQETIGLGFREEGALELRSSTEELYF
MDPEQKKEEQERMQQQQQQTKRSSPHIFKFDDHQSYLQQHQRKDSASSEVAALLCISG
RTSRISSVGSQGSAVSRLSAVSCVSRSPSPHRMLLETSFCGPKPLEQGASSAAGSTAS
TLASSSHTHAETAPGGGGVVTGAAPGGVAANTALLEQLLLARKHDPTQAVLAEGIKVL
PPAPATRTSSGSNVPVMGAQRRSTKSPGQMVIGKTPSGTEYIRINLRPDHMYSDRGIA
ANERVVEAPNQLTPVYSASALAAGQPKPPASLSLQGGGGGGGAGVGHDENRLTPTASP
KPGRHALRLGSRSPSPSPAATSVSRKSSFSSLFRLGKDSPDSPRESARARSKSKERSS
AGAPVATTTTGSSQNVTPSKQKSVLAIFKSGKRGSSAGTDGTKSSKSSSPIEPSCEPP
PPPPPAPGSAGSSGGRSRTPAGSRPGSRLRYYDEPVEGVIHIPLHTPPEEREARTLLQ
GIQNLIAAPSPPPIQARTPPQPPAAQSQAQQPPTASCGAVSVTGNGSGATITASQLAA
AAAALRPVGQRKTVAQRPDLDAIQSLNSQEEVEKEKGWSLEVQRHSSQDSQETLQSVS
SVVSARASNLAQIHQEPEPEPEAEQERDPSVRENGLGEMQRLPSVDSTQSACEPPRLV
HTVATVSAPQSEDAAAKERRRLLFATRLGSGSQEQIFSTQFSISKTESQSSQLSEQVL
ESANNSTASDGPATSVDGLQRQGTVIRRTEMSAVPPPPPPRGISSSEEEQPASSSSGN
HPAVVLRSKHRSRPTSEDEGPGPAPAADLRHSRYLENFDVRRKLHENVPLEGKEVRRR
QQHHHQPQQQPQQQESTPVPRKPKRQSVPEPRRETSQSSGGATPTTPTPTPLPAGGKT
PTPTDRATPIGVATATGMGMETGMATGMETPTPTASPDPMLTSPLAERRLSQSTDEHE
PVESSESERDSDMAGSSSVTTAVAVGGEGQGPGKRHHFPRNVCVIEEHESTGLVSQES
FDDELPYIPTTLPEERAQGVPLIPMKERANMELKTCPVDRPRSTTPLNPSHLEEYCTG
IMTPQEAPHVGVHELDNGASAAAGGGAGGAAGGGSGPLRGEKLRISLPRKESMGKEGR
APGQSSKSPRRISNASGKSWFEFAEEGLRANNLERKDSSKQLLPAQGSGAVPVPVPIP
MPATNPVPTPASAPPGIGLEEPKPKASTQRKLSGHWIDFENIPEKRKPAKRITTLPKE
TIAASNTATTSSSSACGSGHRSGGSGSGSGPHHHHHHHHQTRPGSGSQDPNTGGASDK
LHYNYVKPEDCQCECHEAERGETSMATAGAGDSSTGTGTGTGTTSDSLASVDLLQQGE
DMLPLLDPEPQPETRVYTDEEAPAPTRHASKSSGVARVSLEGYAQTFRRFFGIKWIMK
LLSTFHFPQLSNLWGCNQN"
ORIGIN
1 ccgtcgccgt cgacgctgtg ctcattcagc gtttagcata catttcgggg ctttcggcag
61 tacgacgcta acgctgcgtg cgtgcggtct aacggtaaaa acgtgacgga gagagagcca
121 gcccccagcc aggcgtgtga agtgagggag agagagtgag agagagagcg agagagagcg
181 agagttagga ggcgaacgag aacgcgaacg ggagcgagcg aggcgaggcg agacagagga
241 agatagccag atagcagtcc gcgttaagaa gaaaatcaaa cagagcaaga aagcagcagc
301 agagggcaca aattttgttc ttaatttttt gttgttgttc agtgccaaaa aaaataatat
361 tgatggaaaa ttgataagac agagttcagc gttcaagcga taagcaaaat acacacacac
421 acacaaacac gctcaaacac acgctcacac acacacacac ccgcgctcac acgcgaaccc
481 gcgaaggagg agtaaaaaca gcagagaagc agcgtaacgg catctagtta tattttttgg
541 gtccgcgatg atggagcaag gtgcacggaa acagacagcg acaaccgcaa cgacgaggaa
601 tagaagcagc gccagcgaag cacccagcat tgtggcaccg gcagtcacct gcagcagcag
661 caccaccaca tcctcctcat catcatcatc gtcgtcggcc acctgctcgg cgacgattgt
721 ggttaagcag cggccgccac cactgaagac ggccacgaca acggtgacca cgacattggt
781 cagcagcaat gagggcggcc agccgctgcc acccattgcc caggccagct accggggtgc
841 cacggccacc ctgaccacac cctcaacgcc acggatcgag ctgagccgcg cctccagctc
901 gtcccatcac gaggaggata gccgtgagag cagtcccgag aatgtcttcg agcaggaaac
961 gattggcctt ggctttcggg aggagggcgc tttggagcta cgcagctcca ccgaggagct
1021 gtacttcatg gatccagaac agaaaaagga agagcaggag cgcatgcaac agcaacagca
1081 gcagacgaag cgctcctcgc cgcacatctt caagtttgac gaccaccaga gctacctgca
1141 gcagcaccag cgcaaggact cggccagctc ggaggtggcc gctctgctct gcatctcggg
1201 ccgcaccagt cgcatctcga gcgtcggcag ccagggttcg gccgtgagcc gcctctccgc
1261 cgtttcctgc gtctcgcgct cgccctcgcc ccatcgcatg ctgctggaga cctccttctg
1321 cggtccgaag ccactcgagc agggtgccag cagtgccgcg ggaagcactg cctccacgct
1381 ggccagctcc tcgcacactc acgcagagac cgcgccgggt ggtggcggcg ttgtgacggg
1441 tgcagcgccc ggaggtgtgg cggccaatac agcgctgctg gagcagctgc tgctggcccg
1501 caagcacgat cccacccagg cggtgctggc cgaaggcatc aaggtgctgc cacctgcccc
1561 ggccacacgc accagcagcg gcagcaacgt cccggtcatg ggcgcgcagc gcaggagcac
1621 caagagcccc ggccagatgg tcatcggcaa gacacccagc ggcacggagt acatccgcat
1681 caatctgcgg ccggaccaca tgtacagcga cagaggcatt gcggccaacg agcgggtggt
1741 agaggcgccc aaccagctca cgcccgtcta ctccgcctcc gctttggccg ccggacagcc
1801 caagccaccc gcctcgctca gcctgcaggg gggtggcggt ggcggtgggg ctggggtcgg
1861 tcacgacgag aaccgcctga caccgacggc gagtccgaaa cccggccggc atgccctgcg
1921 cttgggcagt cgctcgccct caccctcgcc ggcggctact tctgtgtccc gcaagagctc
1981 cttcagctcc ctcttccggc tgggcaagga ctcgccggac tcgccgcgag agtccgcccg
2041 agcgcgcagc aaaagcaagg agcgctcctc agcgggcgcg cctgtggcga caacgacaac
2101 cggctcctcc cagaatgtga cgcccagcaa gcaaaagtcc gtgctggcca tcttcaagtc
2161 gggcaagcgg ggcagcagcg ccggcaccga tggcaccaag agctccaaga gttcctcgcc
2221 catcgagccg agctgcgagc caccgccgcc gccaccaccg gcacccggat cggccggatc
2281 atcgggcgga cgcagccgca caccggctgg ctccaggccg ggcagccggc tgcggtacta
2341 cgatgagccg gtggaggggg tcatccacat accgctgcat acgccgccag aagagcgcga
2401 ggcccgcacc ctgctgcagg gcattcagaa tctgattgca gcgccctctc cgccgcccat
2461 ccaggccagg acaccgccac agccaccagc agcacagtcg caggcgcagc agccgccgac
2521 cgcctcctgt ggcgccgtgt ccgtaaccgg caacggatcc ggagccacca tcacggccag
2581 ccagttggcg gcggccgccg ctgccctgcg acctgtgggc cagcgaaaga cggtggccca
2641 gcgtccagac ctggatgcca tccagtcgct caactcccag gaggaggtgg agaaagagaa
2701 gggctggagt ctggaggtgc agcggcacag ctcgcaggac tcgcaggaga cactgcaatc
2761 ggtgagctcc gtggtgagtg cacgggcctc caacctggcc cagatccacc aggagcccga
2821 gcccgagccg gaggccgagc aggagcggga cccttcagtg cgggagaacg ggctggggga
2881 gatgcagcgc ctgccctcgg tggacagcac gcagagtgcc tgcgagccgc cgcgcctggt
2941 gcacacggtg gccaccgtca gtgcgcccca atccgaggat gcggcggcca aggagcgccg
3001 ccgtctgctg ttcgccacgc gactcggctc cggcagccag gagcagatct tctccacgca
3061 gttcagcatc tcgaagacgg agagccagtc cagccagctg tccgagcagg tgctcgagtc
3121 cgccaacaac tcgacggcat cggacggacc ggcgacctcc gtcgacggac tgcagcggca
3181 aggcactgtc attcggcgca cggagatgag cgccgtgcca ccaccgccac caccacgcgg
3241 catctccagc tccgaggagg agcagccggc cagcagcagc agcggcaacc atccggcagt
3301 cgtgctgcgc tccaagcaca ggtcgcgtcc cacttccgag gatgagggtc cgggcccggc
3361 cccggcggcg gatctgcgcc attcgcgcta cctggagaac ttcgatgtgc gccgcaagct
3421 gcatgagaat gtgcccctag aagggaagga ggtgcgccga aggcagcagc accaccacca
3481 gccccagcag cagccccagc agcaggagag taccccagtg ccacggaaac ccaagcgaca
3541 gagtgtcccc gagccaagac gtgaaacctc gcagagctct ggcggtgcca cgcccactac
3601 tccaacaccc acacccttac ccgctggcgg caaaacaccg actccaacgg acagagccac
3661 gcccattgga gttgcaactg caacgggaat gggaatggaa acgggaatgg caacgggaat
3721 ggaaactcca acgccaacgg ccagcccgga cccgatgctc acctcgccac tggccgagcg
3781 gcgtctctcg cagtcgacgg acgagcacga gcccgtggaa tcgtcggaga gtgaacgtga
3841 ctccgatatg gctggcagct cgtcggtcac gacagcagtg gccgtgggcg gggaggggca
3901 gggtccgggc aagcggcacc actttccgcg caacgtgtgc gtaatcgagg agcacgagag
3961 caccggcctg gtgtcgcagg agtccttcga cgacgagctg ccgtatatac cgacgacgct
4021 gccggaggag cgggcgcagg gcgtgccgct gataccgatg aaggagcggg ccaacatgga
4081 gctgaagacc tgtcccgtgg acaggccgcg ctccacaacg cccctcaatc cctcgcacct
4141 ggaggagtac tgcacgggca tcatgacgcc ccaggaggca ccgcatgtgg gagtccatga
4201 gttggacaac ggagcatcgg ctgcagcagg aggaggcgca ggaggagcgg ctggtggtgg
4261 tagtggtcct ttgaggggag aaaagctccg catcagtctg ccgcgcaagg agtcgatggg
4321 taaggagggc cgggcaccgg gccagagctc aaagtcgccg cgacgcatct ccaatgccag
4381 cggcaagtcg tggttcgagt tcgcggagga gggactgcgc gccaacaatc tggagcgcaa
4441 ggactccagc aaacagttgc tcccagctca aggttcaggt gcagttccag ttcccgttcc
4501 cattcccatg cccgccacca atccggttcc aactccagcc tctgctccac ctggcatcgg
4561 gctggaggag cccaagccga aggcatccac acagcgaaag ctgtccggcc actggatcga
4621 ctttgagaac atcccggaga agcgcaagcc ggccaagcgg ataaccacgc tgcccaagga
4681 gacaatagcg gccagtaaca cggccacaac aagctcctcc tcggcgtgcg gcagtggcca
4741 tcggtctggt ggctctggtt ccggttcggg gccacatcat catcatcatc accaccacca
4801 gacgcggccg ggatcaggat cgcaggatcc gaacactgga ggagccagcg ataagctgca
4861 ctacaactat gtgaagccgg aggactgcca gtgcgagtgc cacgaggccg agcgcggcga
4921 aacctccatg gccacagcgg gcgccgggga cagcagcacg ggaacgggca cgggcactgg
4981 aacgaccagc gactccttgg catctgtgga cctgctgcag cagggtgagg acatgctgcc
5041 gctgctcgat cccgagccac agccggagac cagagtctat acggacgagg aggcgcctgc
5101 cccaacgcgg catgccagca aaagcagcgg tgtagcacgg gtgagtttgg aaggatatgc
5161 tcaaaccttc cgaaggtttt ttggcatcaa atggattatg aaattacttt ccacattcca
5221 ttttccgcaa ctcagcaatc tgtggggatg caatcaaaac taaccccaaa cttttgtcct
5281 acccaatcca cagacccaaa tggaggagtt tccccgacgc gacatcggat cgagtccacg
5341 caatcgaaaa tttcccgata gaaagtaaga tgagcaatta gctcgcattg gatacagatt
5401 ggagtcatgg gttgatggct catggctcaa ggctcaaggc tcatggtaga tcttcagggt
5461 agctacacca gtaatctttc tatatgtgta agtcgactca ctaaactaag ggcctaagca
5521 gtgtgcgtgt cctcttggcc tatatcctta atgtacctca agcagtgtgg ttgttataag
5581 cagagacgaa cgacgcgacg atcgatcaaa gtac