PREDICTED: Drosophila obscura bromodomain-containing protein 3-like
LOCUS XM_041591935 1219 bp mRNA linear INV 14-MAY-2021
(LOC111072431), mRNA.
ACCESSION XM_041591935
VERSION XM_041591935.1
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1219
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1219
/gene="LOC111072431"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 100% coverage of the annotated
genomic feature by RNAseq alignments, including 5 samples
with support for all annotated introns"
/db_xref="GeneID:111072431"
CDS 16..894
/gene="LOC111072431"
/codon_start=1
/product="bromodomain-containing protein 3-like"
/protein_id="XP_041447869.1"
/db_xref="GeneID:111072431"
/translation="MAMRKKKLPLDACKEILVVLLSKKHRDCAWPFYNPVDAEKFGLH
DYHDIIKKPMDLGTMKRKMDNRQYTSAAEFAEDMRLMFSNCYKYNPPDHDVVAMGQKL
QHVFEALYAGIPDEPVSNATCHTTLTHSHTQGNGNGQGHGANVSASLNQDGSDSENES
RSDAESSSSSSSEEDSAKLKVLQSKLNTTYSKLRDVMAENRKLIQEKKKGWIVGKELR
AKERSIDNKQIDLDKQIENLTEEVHALKMKMKRQSEAPGSSSVFPQAQASTPMSSTRS
GVSSYKNTGGRKSQRN"
misc_feature 43..345
/gene="LOC111072431"
/note="Bromodomain, Brdt_like subfamily, repeat II. Human
Brdt is a testis-specific member of the BET subfamily of
bromodomain proteins; the first bromodomain in Brdt has
been shown to be essential for male germ cell
differentiation. Bromodomains are 110 amino...; Region:
Bromo_Brdt_II_like; cd05498"
/db_xref="CDD:99930"
misc_feature order(121..123,142..144,151..153,268..270,280..282,
298..300)
/gene="LOC111072431"
/note="acetyllysine binding site [active]"
/db_xref="CDD:99930"
ORIGIN
1 ttactcgact tagaaatggc gatgcgcaag aagaagcttc cactagacgc ttgcaaagaa
61 atcctcgtgg ttctgttaag caagaagcac cgcgactgtg cgtggccctt ctacaatccg
121 gtggatgcgg agaagtttgg cctgcacgac taccacgaca taatcaagaa gcctatggac
181 ctgggcacca tgaagcgcaa aatggacaac cggcagtaca cgagcgcggc ggagtttgcc
241 gaagatatgc gattgatgtt cagtaactgc tacaagtaca atccgccaga tcatgatgtt
301 gtggccatgg gacagaagct gcagcatgta ttcgaggcac tctacgctgg gatacccgac
361 gaaccggtgt cgaatgcgac atgccacaca acactgaccc attctcatac tcagggtaat
421 gggaatgggc aggggcacgg tgccaatgtg agcgcctccc tcaatcaaga cggcagcgac
481 tcggagaacg agtcccgctc ggacgcagag tcaagctcca gctccagctc ggaggaagat
541 tccgcaaagc tcaaagtcct ccagtccaaa ttgaacacta cctactcgaa actgcgcgat
601 gtaatggcgg agaatcgcaa gttgatacag gagaagaaga aagggtggat cgtcggcaag
661 gagctcaggg ccaaggagag aagcatcgat aacaagcaga ttgatcttga caagcagatc
721 gagaacctca ccgaggaggt tcatgccttg aagatgaaaa tgaagcgaca gagcgaagcc
781 cccggctcca gctcggtatt cccccaggcc caggcctcga caccgatgtc ctcaactcgc
841 agcggtgtct ccagctacaa aaatactgga gggcgcaaga gccagcgcaa ctaacgatac
901 tgaagcctgg gggaaaggca accaggggaa gccaatacac aatattagct gtgataactg
961 cgaggaagtt tactttactt gtgcagtgca gtttatatac ccttgaagag ggtatacccc
1021 cgtttaactc agtttttgag aagatctttt gtaagagaag gaccacatct gtgctagcac
1081 aaacaccgga caacagagac cataagaaac atacacctaa ctgataagcc atcccttttg
1141 tgtgttgtct tgagcaacca caaggctctg atcagcatat gcttatcgtt aattagctgt
1201 taaatatgta actacttta