Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_041591928 1879 bp mRNA linear INV 14-MAY-2021 (LOC121403879), mRNA. ACCESSION XM_041591928 VERSION XM_041591928.1 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq; corrected model; includes ab initio. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 4% of CDS bases frameshifts :: corrected 2 indels ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-352 JAECWW010000165.1 1720926-1721277 353-634 JAECWW010000165.1 1721279-1721560 635-1857 JAECWW010000165.1 1721562-1722784 1858-1879 JAECWW010000165.1 1723393-1723414 FEATURES Location/Qualifiers source 1..1879 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..1879 /gene="LOC121403879" /note="The sequence of the model RefSeq transcript was modified relative to its source genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:121403879" CDS 95..1879 /gene="LOC121403879" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons" /codon_start=1 /product="LOW QUALITY PROTEIN: protein transport protein SEC9-like" /protein_id="XP_041447862.1" /db_xref="GeneID:121403879" /translation="MATTTIEAAAAPSAQPQQQQPPAVHLSTADHLSANRSSSCSNTN SNNNNNHSSSSRSSSRSSSNSSSNNNNNNNPNQNQKSIPIKIPLSERFSSQTSTGSAD SGVIVSSASQQTLLQQLPPVRSSSGSLSIHGAQPKWQKRRQLLSQDSGIEHVGGTGGG AGAGARPRPGAPVGGGGVGSSSAAGGEGVSGQSTSSSESLGSSGGGCTNASDPPGGRM RAASALELSSVGGGATMGGAGGGNALRRIKYKSTNSTGTQGFDVEDRIDEVDICDDDD DDDDDDLHLVENDEEEEDDGVAVDDVDGEDPEEADTQSDTQSGIVINMGGSGSGSGRN SNETDQLDQPLPLDKAPLTVAAAAAKRRDIKSLATDGHIYFPLMKISEDPHIDARLIN RKDGLQDTMYYLDEFGSPKLREKFARKQKQLLAKQQKALLKREREDQRKKRNTTVASN LAASGMDTTKEHCDTIAMSNSHGTATGTIHKHSSDPNQHHSHLDDDDVQIGVAVDDDE ELQLDVVKLRGRSHSQGNNLYDASNNTRHQPHRHTHANGDGHEVGQDEEEDIEQGAEP AFDGDSLDENVKTVTKISRTQSAVFGYT" ORIGIN 1 aacaatcaaa caaaacaaat ccaaaatcaa cggaaagact ttaaccctta gaaggaaaaa 61 taggacatag gcctggatag agccccaaaa cctgatggca acaacaacca tagaagcagc 121 agcagcgccg tccgcccagc cgcagcagca gcagccgccc gctgtccacc tgtccaccgc 181 tgatcatctg tccgccaaca gaagcagcag ctgcagcaac accaacagca acaacaacaa 241 caaccacagc agcagcagcc gaagcagcag tcgaagcagc agcaacagca gcagcaacaa 301 caacaacaac aacaatccga accaaaacca gaaatccatc cccattaaga tacccttaag 361 cgagcgattc tcatcgcaga cctcgacagg atcggcagac agcggtgtga tcgtctcgag 421 cgcctcccag cagacgctgc tgcagcagtt gccgccagtg cgcagcagca gcggttccct 481 gagcatacac ggagcgcaac ccaagtggca gaagcgtcgc cagttgctca gtcaggacag 541 tggcatcgag catgtgggag gcactggagg aggagctgga gcaggagcac ggccacgacc 601 aggagcgcct gtcggcggag gtggagtggg aagttcgtcg gcagctggag gcgagggcgt 661 gagcgggcag tcgacaagca gcagtgaatc gctgggcagc tccggcggtg gatgcacaaa 721 tgcatccgat ccgccgggcg gacgcatgcg cgcagcctca gccctggagc tgagcagcgt 781 gggcggagga gcgaccatgg gaggagcagg aggaggcaat gccctgcgcc ggatcaagta 841 caagagcacc aatagtaccg gcacccaggg attcgatgtg gaggatcgca tcgatgaggt 901 ggatatctgt gatgatgatg acgacgatga tgatgatgat ctgcacttag tggagaacga 961 tgaggaggag gaggacgatg gtgtggctgt ggatgatgtg gatggagaag atcccgagga 1021 ggcggacacc caatccgaca cacagtctgg gatagtaatc aacatgggcg gcagtggcag 1081 tgggagtggc aggaacagca acgagacgga tcaactggat cagccattgc ccctcgacaa 1141 ggcacccctc acggtggcgg cggcggcagc caagaggcgg gacatcaaga gccttgccac 1201 cgatggccac atctactttc cgctgatgaa gatcagcgag gatccgcaca tcgatgcgag 1261 gctgatcaat cgcaaggacg ggctgcagga caccatgtac tatctggacg agttcggcag 1321 ccccaagctg cgcgagaagt tcgcacggaa gcagaagcag cttctggcca aacagcagaa 1381 ggccctcctc aagcgggagc gcgaggatca gcgcaagaag cgcaacacca cggtggcctc 1441 caatctggcg gccagcggga tggacaccac caaagaacac tgtgatacaa tagccatgtc 1501 caatagccat ggaacagcaa ccggaacgat ccacaagcat agctccgatc ccaatcaaca 1561 tcattcgcat ctcgatgacg acgatgtcca gatcggggtg gccgttgacg atgacgagga 1621 gctacaactg gatgtggtta aattgcgcgg ccgcagccac agccaaggca acaacctcta 1681 cgatgctagc aacaacaccc gccaccaacc ccaccgtcac acccacgcca atggggatgg 1741 ccacgaagtg ggtcaggacg aggaggagga tatcgagcag ggggccgagc ccgctttcga 1801 tggcgatagc ctcgatgaaa atgttaagac tgtcacaaag atatccagaa cgcagtcagc 1861 tgtttttggc tacacctag