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LOCUS XM_041591923 5697 bp mRNA linear INV 14-MAY-2021 (LOC111066225), transcript variant X2, mRNA. ACCESSION XM_041591923 VERSION XM_041591923.1 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5697 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..5697 /gene="LOC111066225" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:111066225" CDS 372..5681 /gene="LOC111066225" /codon_start=1 /product="uncharacterized protein LOC111066225 isoform X2" /protein_id="XP_041447857.1" /db_xref="GeneID:111066225" /translation="MDTVAIKTALPHAPLAAQQQQQQQQQQQQQPQNAQTATINAKNN IGAFFQTCKVLWHLDAFRRSFRGLNQHVCGGQDCIFCALKELFQQLQTSSEPALCPEP LRRALASGPLAGRRFPLGCLGDAAECFELLLHRVHSHISSDDGDSCESSACIAHRRFA MRVIEQSVCKCGANSEQLPFTQMVHYVSASALTSQKSLALQSHQQLSFGQLLRAAGNM GDIRDCPNTCGAKIGIRRALLNRPDVVSIGIVWDSERPAADQVHAVLKAVGTSLRLAD VFHQVSEQRWAQQAQHELVGIVSYYGKHYTTFFFHTKLKVWVYFDDANVKEVGPSWDG VVDKCSRGRYQPLLLLYAVPQPPSSAAGMDQLPVAGSLPSPAASMTAAGLAATVVRRA VTPSPEKPSLGSTRRAITPTPLRTPTNDYQNLSVIQKSIFPSNGAGTDETDAYISRKT VEHVLSAQYQNLSVIQDKINAVPGSVATSNADKDGGFLNRKPIEAMLSAQLARRQHLQ LQRSHSAESSSGHASNGSSPPSDGLTMPEHLNQPRRRDSGNWSGDRNSASSASSTTLD NPYLYMVAKRGVAAVPQSPTRHGLPYDPGYDSFSLSSTDSYPPKHILNPQLAKIPEAA MGMGMGMGMGMGAGVGVGAGNVQGAGVGVGAGVPVGHGLALSGDCEKLCHEADQLLEK SRIVEESHDLETALVLCNAAAGRARAAMDAPYSNPHTMTFARMKHNTCVMRARSLHRR ILVEKGAESEAMPELKHMREGSTSSVKHVRQNSKDRTLEKEQLQMQLQLQQQLQQQLV PSAVSKNIEIYATLPKRKSPLKALAAAASGSGSVGMDDNAIEYEQQVVASSSSPASSQ KPERERESRSLFGRKDKDKDKEKEKRSRSEDRNKLTREFSLTETLLVNAKDTLKKHKE DKDEKKEKDKSGKKQHKIRRKLLMGGLIRRKNRSMPDLTEAVDDAAAPISGPAHHHHH LQLHHPCAPTAGHLMGSSVDDSAVGLGKHALAMSGYISEGHFDYPLGTGPCTSNVGVG SGSGSNPNPNLERSKLMRKSFHGSGRQLTMPVPKVAPPPPMRTSSALTPHQQQQQQQQ QFHHEANLSNLSAMSSNTSISEDSCQTIITTCAQVHSEQSPLKDMQMLGMAQGQEELP LPLPPMELPPYPSPPHSVCHSRQASEDFPPPPPPELDLEPLNQQLSQLQQLEAANKQQ RQQQLDSLEGTTSILAQLQQRQHLLKLRKEQTGAGSDATWLKELQAKQAADLRTMQRK LEASSPSSVRDLAHRFEQTATIRSYASQELLAQPRTQMNGLPSQAKLDADEVDCAGPV RASLPLPLPLPHQLMLPKPKYEMSQSQIAEEIREVELLNSMVQQTLNQSAAAGAPPKR VKKKSVSFCDQVILVATAGNEEDDDFIPNPILERVLRTAQHPNEKVTAQMIQQQQQNM LRLQTEPQPRQQHQQQQQQQQQQQQQQQQQQQQQQQQLQLQHQQQQQQPSPMLGRPAA TDMQRYVQRMQQQQQQQQQQQQQQQEMYRQQQQQQQHRTSMSGIVSQQHLQLQQQQQQ QQQQHQIDAQYTSMPRPLHHPHLLPQTYSVQLQKHQQHQQQLQQQHQQQPSPQLSLGY FSNGQAAASEQVPQPQPLPSPYQRVPLPHGYQPTGGPYYPLPNQQQQQLIIANGKPAQ KKVSFEPGTKGEADCLPPPPPPPQTKLALQNGLPESASPGAGPGSAPAAITAIPTRVY NNAIVKASAKAVECNLCRKRHVIAPAVYCTNCEYYLQMLNQRR" misc_feature 498..1364 /gene="LOC111066225" /note="Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly...; Region: Peptidase_C19; cl02553" /db_xref="CDD:470612" misc_feature <5589..>5657 /gene="LOC111066225" /note="protein kinase C conserved region 1 (C1 domain) superfamily; Region: C1; cl00040" /db_xref="CDD:412127" ORIGIN 1 acaacagcaa caaaaacagc aacaacagca acaaaaagtt tagttaagtg aacgcaaaca 61 ggtgcaaaac gaagcacgag aagaagaacc aaaaaaagtg taagagctgg aagagagaag 121 aaccagaagt ggaggaaaac aacaacagca aaaaaaaaat agaagcagca gcagcagttg 181 cccaagaagt ggaagcaaaa gggttgtcga tactcgcaac acttcccttt cgggcttcct 241 ctggcggaag ttgcaagtgg caacaacagc aacaacagca acaacagcaa caacaacaac 301 aacaacaacc atgtgctgat ctcaaagcgc ggggaatagc cttactgttc ggttgccaaa 361 actcattcaa tatggatacg gtggccatta agacagcact gccgcatgcc ccattggctg 421 cccaacagca gcagcagcaa cagcaacagc agcagcagca accacagaat gcccaaacag 481 caacaatcaa tgccaaaaac aacattgggg cattttttca gacctgcaag gtcttgtggc 541 acttggacgc ctttcgacgc tcgttccggg gccttaacca gcatgtatgc ggcggccaag 601 actgtatatt ctgcgctcta aaggaactct tccagcagct gcagaccagc tcggagcccg 661 cactctgtcc ggaacccttg cggcgagcct tggccagtgg acccctggcc ggacgacgat 721 ttccgctggg ctgcctgggc gatgctgccg aatgctttga gctgctgctg catcgcgtcc 781 actcgcacat ctcgtccgat gatggggact cgtgcgagtc gagtgcctgc attgcccatc 841 gccgctttgc catgcgcgtc atcgagcaga gtgtctgcaa gtgtggggcc aactccgagc 901 agcttccctt cacgcagatg gtgcactatg tgtccgcctc ggcccttaca tcgcagaaga 961 gcctggccct gcagagccac cagcagctga gctttggcca gctgctgaga gctgccggca 1021 acatgggcga catacgcgac tgtccgaaca cctgtggagc caagatcggg atacgccgag 1081 cgctgctcaa tcgtcccgat gtcgtctcca ttggcatcgt ttgggactcg gaacgacccg 1141 ccgccgacca ggtgcatgcc gtgctcaagg cggtcggaac gagtctgcgc ctggcggacg 1201 tcttccatca ggtcagcgag cagcgctggg cccagcaggc gcagcacgag ctggtgggga 1261 tcgtctccta ctacggcaag cactacacca ccttcttctt ccacaccaag ctgaaggtgt 1321 gggtgtactt cgacgacgcc aacgtcaagg aggtgggtcc cagctgggac ggagtggtgg 1381 acaagtgcag tcgcggccgc taccagccgc tgctgctgct gtacgcggtg ccccagccgc 1441 ccagctccgc ggcgggcatg gatcagctgc ccgtcgccgg atcgctgccc tcgccggctg 1501 cctcaatgac ggcggcggga ctggccgcga cggtggtgcg ccgggcggtg acacccagcc 1561 cggagaagcc ctcgctgggc agcactcgac gggccattac gcccacgccc ctgcgcacgc 1621 ccaccaatga ctaccagaat ctgagtgtca tccagaagag cattttcccg tcgaatgggg 1681 cgggcaccga tgagacggat gcctacatca gccgcaagac ggtggagcac gtgctgagcg 1741 cacagtacca gaacctgagc gtcatccagg acaagatcaa cgccgtgccc ggctcggtgg 1801 ccacgtccaa tgccgacaag gatgggggct tcctcaatcg gaagcccatc gaggcgatgc 1861 tgagcgccca gctggcgcgc cggcagcacc tccagctgca gcgcagccac agcgccgagt 1921 cgagctccgg ccacgcctcc aatggcagct cgccgcccag cgacgggctg accatgcccg 1981 agcacctgaa ccagccccgg agacgggact cgggcaactg gtcgggggat cgcaacagcg 2041 ccagctcggc cagctccacc accctggaca atccctacct gtacatggtg gccaagcggg 2101 gcgtggcggc ggtgccgcag agccccacgc ggcacggcct gccctacgat cccggctacg 2161 actcgttctc gctgagctcc acggactcct atccgcccaa gcacatcctc aatccgcagc 2221 tggccaagat acccgaggca gccatgggaa tgggaatggg catgggcatg ggcatgggcg 2281 ccggagtcgg agttggggcg ggaaacgttc aaggagcagg agtcggagtc ggagcaggag 2341 tcccagtcgg acatggcctg gccctgtccg gggactgtga gaagctctgc cacgaggcgg 2401 accagctgct ggagaagtcg cgcatcgtgg aggagtcgca cgacctggag acggccctgg 2461 tgctgtgcaa tgcggccgcc ggccgggccc gggccgccat ggatgcgccc tacagcaacc 2521 cgcacacgat gacctttgcc cggatgaagc acaacacgtg cgtgatgcgg gcccgcagcc 2581 tgcaccggcg catcctcgtg gagaagggcg ccgaatcgga ggccatgccc gagctgaagc 2641 acatgcggga gggcagcacc agcagcgtga agcacgtccg ccagaacagc aaggaccgca 2701 ccctggagaa ggagcagctc cagatgcagc tccagctgca gcagcagctg cagcagcagc 2761 tcgtgccaag cgccgtctcc aagaacatcg agatctacgc gacgctgccc aagcgaaaga 2821 gcccgctcaa ggcgctggcc gctgccgcct ctggctctgg ttcagtgggc atggatgaca 2881 atgccatcga gtacgagcag caggtggtgg ccagcagcag cagtccggcc agcagccaga 2941 agccggagcg ggagcgggag agccgctcgc tgttcgggcg caaggacaag gacaaagaca 3001 aggagaagga gaagcgcagc cggagcgagg accggaacaa gctcaccagg gagttctcgc 3061 tgacggagac gctgctggtc aatgccaagg acacgctgaa gaagcacaag gaggacaagg 3121 acgagaagaa ggagaaggac aagagcggca agaagcagca caagatacgc cgcaagctgc 3181 tcatgggcgg cctcatccgc cgcaagaacc gctccatgcc cgatctgacc gaggccgtgg 3241 acgacgccgc agcgccgatc agcggcccag cccatcatca ccatcacctg cagctgcacc 3301 atccctgcgc cccgaccgct ggccacctca tgggcagctc cgtggacgac agcgccgtgg 3361 gcctgggcaa gcacgccctg gccatgagcg gctacatctc cgagggtcac tttgactatc 3421 cgctgggcac tgggccgtgc accagtaatg tgggagtggg cagtgggagc ggcagcaatc 3481 ccaatcccaa tctggagcga agcaaactga tgcggaagag cttccacggc agtggccgcc 3541 agctgaccat gcccgtgccc aaggtggcac cgccgccgcc catgcgcacc agctccgccc 3601 tgacgcccca ccagcagcag cagcaacagc agcagcaatt ccatcacgag gccaatctgt 3661 cgaacctctc cgccatgagc tcaaacacct cgatcagtga ggactcctgc cagacgatca 3721 tcacgacctg tgcccaggtg cactccgagc agagcccgct caaggacatg caaatgctgg 3781 gcatggccca gggccaggag gagctgccgc tgccgctgcc gccgatggag ctgccgccgt 3841 acccgagtcc gccgcactcc gtttgccact cgcggcaggc cagcgaggac ttcccgccac 3901 cgccgccacc cgagctcgat ctggagccgc tgaaccagca gctcagccag ctgcagcagc 3961 tggaggcggc caacaagcag cagcgccagc agcaactcga ctcactggag ggcaccacca 4021 gcatcctggc ccagctgcag cagcgccagc atctgctcaa gctgcgcaag gagcagacgg 4081 gagccggcag cgacgccacc tggctgaagg agctgcaggc caagcaggcc gccgatctgc 4141 gcacgatgca gcgcaagctg gaggcctcct cacccagcag cgtgcgcgat ctggcgcacc 4201 gcttcgagca gacggccacc attcggtcgt acgcgtcgca ggagctcctg gcccagccac 4261 gcacccagat gaacggcctg cccagccagg cgaagctcga cgctgatgag gttgactgtg 4321 cgggcccagt gcgtgcctct ctcccgctgc cactgccgct gcctcatcag ctgatgctgc 4381 ccaagcccaa gtacgagatg tcgcagtcgc agatcgccga ggagatccgc gaggtggagc 4441 tgctcaactc gatggtgcag cagacgctca accagagtgc cgccgctgga gccccaccca 4501 agcgggtgaa gaagaagagc gtgtcgttct gcgaccaggt gatcctggtg gcaacggccg 4561 gcaatgaaga ggacgacgac ttcataccca acccgatact ggagcgcgta ctgcgcaccg 4621 cacagcaccc gaacgagaag gtaacggccc agatgatcca gcagcagcag cagaacatgc 4681 tccgactgca gacggagccg cagccccgac aacagcacca gcagcagcag cagcagcaac 4741 agcagcagca gcagcaacag cagcagcagc agcaacagca gcagcaacaa ttgcagcttc 4801 aacatcaaca gcagcagcag cagccttctc ccatgctggg aagaccagcg gcaacggata 4861 tgcagcgata tgtgcagaga atgcaacaac aacagcagca acaacagcag cagcaacaac 4921 agcagcagga gatgtaccgc cagcagcagc aacagcagca gcatcgcacc agcatgagtg 4981 gcatcgtcag ccagcaacac ctgcaactgc aacagcagca gcagcagcag cagcagcaac 5041 accagatcga tgcacagtac accagcatgc cccggccatt gcatcatccc catctactgc 5101 cacagaccta ctcagtgcag ctgcagaaac accagcagca ccagcaacag ctgcaacagc 5161 agcaccaaca gcagccatcg ccgcaactga gcctgggata cttcagcaat ggccaggcag 5221 cggccagcga gcaagtgcca cagccacagc cactgccttc gccttatcag cgagtgccac 5281 tgccacatgg ctaccagccc acaggcggac cctactaccc tttgccaaac caacagcagc 5341 aacagctgat tattgccaat ggaaaacctg cccagaagaa ggtcagcttc gagccaggga 5401 ccaagggcga agccgactgc ctgccaccgc caccaccgcc gccacaaacg aagctggccc 5461 tgcagaatgg tctgcccgag tcggccagcc caggagctgg ccctggctcg gcaccggcgg 5521 ccatcacagc catacccacc cgcgtctaca acaatgccat cgtgaaggcc tcggccaagg 5581 ccgtggagtg caatctgtgc cgcaagcggc acgtcattgc gccagccgtc tactgcacca 5641 actgcgagta ctatctgcag atgctgaacc agcgcagatg atgcactccc agtccca