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LOCUS XM_041591922 5976 bp mRNA linear INV 14-MAY-2021 (LOC111066225), transcript variant X1, mRNA. ACCESSION XM_041591922 VERSION XM_041591922.1 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5976 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..5976 /gene="LOC111066225" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:111066225" CDS 486..5960 /gene="LOC111066225" /codon_start=1 /product="uncharacterized protein LOC111066225 isoform X1" /protein_id="XP_041447856.1" /db_xref="GeneID:111066225" /translation="MIKFRYKRKEPTNVVAQGCAGAAAVPASPQSIAAPSASIATTLQ HQQLNQLMGSNGGGTLPRSSPRKLMMMEAGEGGHKAATLTRQSKQKASVSALAKVASS VELAVLGYNNNNNHSPSNGGGISNGIAERDRCINAVIELFQQLQTSSEPALCPEPLRR ALASGPLAGRRFPLGCLGDAAECFELLLHRVHSHISSDDGDSCESSACIAHRRFAMRV IEQSVCKCGANSEQLPFTQMVHYVSASALTSQKSLALQSHQQLSFGQLLRAAGNMGDI RDCPNTCGAKIGIRRALLNRPDVVSIGIVWDSERPAADQVHAVLKAVGTSLRLADVFH QVSEQRWAQQAQHELVGIVSYYGKHYTTFFFHTKLKVWVYFDDANVKEVGPSWDGVVD KCSRGRYQPLLLLYAVPQPPSSAAGMDQLPVAGSLPSPAASMTAAGLAATVVRRAVTP SPEKPSLGSTRRAITPTPLRTPTNDYQNLSVIQKSIFPSNGAGTDETDAYISRKTVEH VLSAQYQNLSVIQDKINAVPGSVATSNADKDGGFLNRKPIEAMLSAQLARRQHLQLQR SHSAESSSGHASNGSSPPSDGLTMPEHLNQPRRRDSGNWSGDRNSASSASSTTLDNPY LYMVAKRGVAAVPQSPTRHGLPYDPGYDSFSLSSTDSYPPKHILNPQLAKIPEAAMGM GMGMGMGMGAGVGVGAGNVQGAGVGVGAGVPVGHGLALSGDCEKLCHEADQLLEKSRI VEESHDLETALVLCNAAAGRARAAMDAPYSNPHTMTFARMKHNTCVMRARSLHRRILV EKGAESEAMPELKHMREGSTSSVKHVRQNSKDRTLEKEQLQMQLQLQQQLQQQLVPSA VSKNIEIYATLPKRKSPLKALAAAASGSGSVGMDDNAIEYEQQVVASSSSPASSQKPE RERESRSLFGRKDKDKDKEKEKRSRSEDRNKLTREFSLTETLLVNAKDTLKKHKEDKD EKKEKDKSGKKQHKIRRKLLMGGLIRRKNRSMPDLTEAVDDAAAPISGPAHHHHHLQL HHPCAPTAGHLMGSSVDDSAVGLGKHALAMSGYISEGHFDYPLGTGPCTSNVGVGSGS GSNPNPNLERSKLMRKSFHGSGRQLTMPVPKVAPPPPMRTSSALTPHQQQQQQQQQFH HEANLSNLSAMSSNTSISEDSCQTIITTCAQVHSEQSPLKDMQMLGMAQGQEELPLPL PPMELPPYPSPPHSVCHSRQASEDFPPPPPPELDLEPLNQQLSQLQQLEAANKQQRQQ QLDSLEGTTSILAQLQQRQHLLKLRKEQTGAGSDATWLKELQAKQAADLRTMQRKLEA SSPSSVRDLAHRFEQTATIRSYASQELLAQPRTQMNGLPSQAKLDADEVDCAGPVRAS LPLPLPLPHQLMLPKPKYEMSQSQIAEEIREVELLNSMVQQTLNQSAAAGAPPKRVKK KSVSFCDQVILVATAGNEEDDDFIPNPILERVLRTAQHPNEKVTAQMIQQQQQNMLRL QTEPQPRQQHQQQQQQQQQQQQQQQQQQQQQQQQLQLQHQQQQQQPSPMLGRPAATDM QRYVQRMQQQQQQQQQQQQQQQEMYRQQQQQQQHRTSMSGIVSQQHLQLQQQQQQQQQ QHQIDAQYTSMPRPLHHPHLLPQTYSVQLQKHQQHQQQLQQQHQQQPSPQLSLGYFSN GQAAASEQVPQPQPLPSPYQRVPLPHGYQPTGGPYYPLPNQQQQQLIIANGKPAQKKV SFEPGTKGEADCLPPPPPPPQTKLALQNGLPESASPGAGPGSAPAAITAIPTRVYNNA IVKASAKAVECNLCRKRHVIAPAVYCTNCEYYLQMLNQRR" misc_feature 1020..1703 /gene="LOC111066225" /note="Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly...; Region: Peptidase_C19; cd02257" /db_xref="CDD:239072" misc_feature <5868..>5936 /gene="LOC111066225" /note="protein kinase C conserved region 1 (C1 domain) superfamily; Region: C1; cl00040" /db_xref="CDD:412127" ORIGIN 1 gcccaaacaa gtttcagtcg cgagacagtg cggacgtgtt tgatccaacc gaaccatcca 61 gccaccagaa acagtaaacg agaatcgaaa aaaaattgcg cgcgcggcaa aataaaaaaa 121 aaacgctgat ttcaatcata tctcgttttg tttttctttt ttcgagtttt gagtgtgtgt 181 gtgtgtgtgt gcccgttgtc cgtgcctgac aaaagttgaa gagttcgaca aaagttgaag 241 aaacaacaaa aagaacaaca acaacaacga caacaacgaa gttgtttgac tggcaaatgt 301 gcaaaagtaa ctttttagct ggaaaaccat ttgggatttg gataactcag cgagaatcga 361 ggaacgagaa acgagcaacg agcctggaat acacatgtac atgaataccc ctattagaat 421 gatgccggct gaaatgccca actgaaacgc aacgaaaccc aatcggagcg agcgcaggga 481 gcaacatgat caagtttcgg tacaagcgaa aggagcccac caatgtggtg gcacagggct 541 gcgctggagc agcagcagtg ccggcatcac cccagtccat agcagccccc tcagccagca 601 tagccacaac gctgcagcat cagcagctga accagctgat gggcagcaat ggcggcggca 661 ccctgccccg cagcagtccg cgcaagctga tgatgatgga ggcgggcgag ggtggccaca 721 aggcggccac actgacgcgc cagagcaagc agaaggcgtc ggtgagtgct ctggccaagg 781 tggccagcag cgtggagctg gcggtgctcg gctacaacaa caacaacaac cacagcccct 841 cgaatggcgg aggaatcagc aatggaatcg cggaaagaga tcgctgcatc aatgcggtca 901 ttgaactctt ccagcagctg cagaccagct cggagcccgc actctgtccg gaacccttgc 961 ggcgagcctt ggccagtgga cccctggccg gacgacgatt tccgctgggc tgcctgggcg 1021 atgctgccga atgctttgag ctgctgctgc atcgcgtcca ctcgcacatc tcgtccgatg 1081 atggggactc gtgcgagtcg agtgcctgca ttgcccatcg ccgctttgcc atgcgcgtca 1141 tcgagcagag tgtctgcaag tgtggggcca actccgagca gcttcccttc acgcagatgg 1201 tgcactatgt gtccgcctcg gcccttacat cgcagaagag cctggccctg cagagccacc 1261 agcagctgag ctttggccag ctgctgagag ctgccggcaa catgggcgac atacgcgact 1321 gtccgaacac ctgtggagcc aagatcggga tacgccgagc gctgctcaat cgtcccgatg 1381 tcgtctccat tggcatcgtt tgggactcgg aacgacccgc cgccgaccag gtgcatgccg 1441 tgctcaaggc ggtcggaacg agtctgcgcc tggcggacgt cttccatcag gtcagcgagc 1501 agcgctgggc ccagcaggcg cagcacgagc tggtggggat cgtctcctac tacggcaagc 1561 actacaccac cttcttcttc cacaccaagc tgaaggtgtg ggtgtacttc gacgacgcca 1621 acgtcaagga ggtgggtccc agctgggacg gagtggtgga caagtgcagt cgcggccgct 1681 accagccgct gctgctgctg tacgcggtgc cccagccgcc cagctccgcg gcgggcatgg 1741 atcagctgcc cgtcgccgga tcgctgccct cgccggctgc ctcaatgacg gcggcgggac 1801 tggccgcgac ggtggtgcgc cgggcggtga cacccagccc ggagaagccc tcgctgggca 1861 gcactcgacg ggccattacg cccacgcccc tgcgcacgcc caccaatgac taccagaatc 1921 tgagtgtcat ccagaagagc attttcccgt cgaatggggc gggcaccgat gagacggatg 1981 cctacatcag ccgcaagacg gtggagcacg tgctgagcgc acagtaccag aacctgagcg 2041 tcatccagga caagatcaac gccgtgcccg gctcggtggc cacgtccaat gccgacaagg 2101 atgggggctt cctcaatcgg aagcccatcg aggcgatgct gagcgcccag ctggcgcgcc 2161 ggcagcacct ccagctgcag cgcagccaca gcgccgagtc gagctccggc cacgcctcca 2221 atggcagctc gccgcccagc gacgggctga ccatgcccga gcacctgaac cagccccgga 2281 gacgggactc gggcaactgg tcgggggatc gcaacagcgc cagctcggcc agctccacca 2341 ccctggacaa tccctacctg tacatggtgg ccaagcgggg cgtggcggcg gtgccgcaga 2401 gccccacgcg gcacggcctg ccctacgatc ccggctacga ctcgttctcg ctgagctcca 2461 cggactccta tccgcccaag cacatcctca atccgcagct ggccaagata cccgaggcag 2521 ccatgggaat gggaatgggc atgggcatgg gcatgggcgc cggagtcgga gttggggcgg 2581 gaaacgttca aggagcagga gtcggagtcg gagcaggagt cccagtcgga catggcctgg 2641 ccctgtccgg ggactgtgag aagctctgcc acgaggcgga ccagctgctg gagaagtcgc 2701 gcatcgtgga ggagtcgcac gacctggaga cggccctggt gctgtgcaat gcggccgccg 2761 gccgggcccg ggccgccatg gatgcgccct acagcaaccc gcacacgatg acctttgccc 2821 ggatgaagca caacacgtgc gtgatgcggg cccgcagcct gcaccggcgc atcctcgtgg 2881 agaagggcgc cgaatcggag gccatgcccg agctgaagca catgcgggag ggcagcacca 2941 gcagcgtgaa gcacgtccgc cagaacagca aggaccgcac cctggagaag gagcagctcc 3001 agatgcagct ccagctgcag cagcagctgc agcagcagct cgtgccaagc gccgtctcca 3061 agaacatcga gatctacgcg acgctgccca agcgaaagag cccgctcaag gcgctggccg 3121 ctgccgcctc tggctctggt tcagtgggca tggatgacaa tgccatcgag tacgagcagc 3181 aggtggtggc cagcagcagc agtccggcca gcagccagaa gccggagcgg gagcgggaga 3241 gccgctcgct gttcgggcgc aaggacaagg acaaagacaa ggagaaggag aagcgcagcc 3301 ggagcgagga ccggaacaag ctcaccaggg agttctcgct gacggagacg ctgctggtca 3361 atgccaagga cacgctgaag aagcacaagg aggacaagga cgagaagaag gagaaggaca 3421 agagcggcaa gaagcagcac aagatacgcc gcaagctgct catgggcggc ctcatccgcc 3481 gcaagaaccg ctccatgccc gatctgaccg aggccgtgga cgacgccgca gcgccgatca 3541 gcggcccagc ccatcatcac catcacctgc agctgcacca tccctgcgcc ccgaccgctg 3601 gccacctcat gggcagctcc gtggacgaca gcgccgtggg cctgggcaag cacgccctgg 3661 ccatgagcgg ctacatctcc gagggtcact ttgactatcc gctgggcact gggccgtgca 3721 ccagtaatgt gggagtgggc agtgggagcg gcagcaatcc caatcccaat ctggagcgaa 3781 gcaaactgat gcggaagagc ttccacggca gtggccgcca gctgaccatg cccgtgccca 3841 aggtggcacc gccgccgccc atgcgcacca gctccgccct gacgccccac cagcagcagc 3901 agcaacagca gcagcaattc catcacgagg ccaatctgtc gaacctctcc gccatgagct 3961 caaacacctc gatcagtgag gactcctgcc agacgatcat cacgacctgt gcccaggtgc 4021 actccgagca gagcccgctc aaggacatgc aaatgctggg catggcccag ggccaggagg 4081 agctgccgct gccgctgccg ccgatggagc tgccgccgta cccgagtccg ccgcactccg 4141 tttgccactc gcggcaggcc agcgaggact tcccgccacc gccgccaccc gagctcgatc 4201 tggagccgct gaaccagcag ctcagccagc tgcagcagct ggaggcggcc aacaagcagc 4261 agcgccagca gcaactcgac tcactggagg gcaccaccag catcctggcc cagctgcagc 4321 agcgccagca tctgctcaag ctgcgcaagg agcagacggg agccggcagc gacgccacct 4381 ggctgaagga gctgcaggcc aagcaggccg ccgatctgcg cacgatgcag cgcaagctgg 4441 aggcctcctc acccagcagc gtgcgcgatc tggcgcaccg cttcgagcag acggccacca 4501 ttcggtcgta cgcgtcgcag gagctcctgg cccagccacg cacccagatg aacggcctgc 4561 ccagccaggc gaagctcgac gctgatgagg ttgactgtgc gggcccagtg cgtgcctctc 4621 tcccgctgcc actgccgctg cctcatcagc tgatgctgcc caagcccaag tacgagatgt 4681 cgcagtcgca gatcgccgag gagatccgcg aggtggagct gctcaactcg atggtgcagc 4741 agacgctcaa ccagagtgcc gccgctggag ccccacccaa gcgggtgaag aagaagagcg 4801 tgtcgttctg cgaccaggtg atcctggtgg caacggccgg caatgaagag gacgacgact 4861 tcatacccaa cccgatactg gagcgcgtac tgcgcaccgc acagcacccg aacgagaagg 4921 taacggccca gatgatccag cagcagcagc agaacatgct ccgactgcag acggagccgc 4981 agccccgaca acagcaccag cagcagcagc agcagcaaca gcagcagcag cagcaacagc 5041 agcagcagca gcaacagcag cagcaacaat tgcagcttca acatcaacag cagcagcagc 5101 agccttctcc catgctggga agaccagcgg caacggatat gcagcgatat gtgcagagaa 5161 tgcaacaaca acagcagcaa caacagcagc agcaacaaca gcagcaggag atgtaccgcc 5221 agcagcagca acagcagcag catcgcacca gcatgagtgg catcgtcagc cagcaacacc 5281 tgcaactgca acagcagcag cagcagcagc agcagcaaca ccagatcgat gcacagtaca 5341 ccagcatgcc ccggccattg catcatcccc atctactgcc acagacctac tcagtgcagc 5401 tgcagaaaca ccagcagcac cagcaacagc tgcaacagca gcaccaacag cagccatcgc 5461 cgcaactgag cctgggatac ttcagcaatg gccaggcagc ggccagcgag caagtgccac 5521 agccacagcc actgccttcg ccttatcagc gagtgccact gccacatggc taccagccca 5581 caggcggacc ctactaccct ttgccaaacc aacagcagca acagctgatt attgccaatg 5641 gaaaacctgc ccagaagaag gtcagcttcg agccagggac caagggcgaa gccgactgcc 5701 tgccaccgcc accaccgccg ccacaaacga agctggccct gcagaatggt ctgcccgagt 5761 cggccagccc aggagctggc cctggctcgg caccggcggc catcacagcc atacccaccc 5821 gcgtctacaa caatgccatc gtgaaggcct cggccaaggc cgtggagtgc aatctgtgcc 5881 gcaagcggca cgtcattgcg ccagccgtct actgcaccaa ctgcgagtac tatctgcaga 5941 tgctgaacca gcgcagatga tgcactccca gtccca