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LOCUS XM_041591917 2668 bp mRNA linear INV 14-MAY-2021 transcript variant X2, mRNA. ACCESSION XM_041591917 VERSION XM_041591917.1 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2668 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..2668 /gene="LOC111066365" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:111066365" CDS 205..2352 /gene="LOC111066365" /codon_start=1 /product="protein sprint isoform X2" /protein_id="XP_041447851.1" /db_xref="GeneID:111066365" /translation="MSWFRRSSRAQTGSQSESDRDKDNDTEKDGNADADAKPDMSKSL SSLDEQRIERLEPEEFFHDPDHVRHYKEEAMFLSIMAEWEIIEHPPQGNYFSADFEEE LLLQRTQPQPQSPSQPDLMTSLPDLDTTAMKEKQPKGRRKRKFLELLFVDNIQTGIAL PIQGMGQELPSPSSVLCKKSKYTTSSTNNTATCPQQVLKDCRINRTQLKTEALAGSIM GAIGKCPNPTAEGSVASTQQIHTDSCHPGELNTCDHYDIKQFFHLDERGNILLNMTHI VEFRAWGLALQGQSRRLYRRYRRGCECADEDYCRKRGCCYLLRRLLRLLCELIVGHPR NKMNIQSSGPGDSLRAYTLQLAQDPSSTFARNIENFISCTKESREAAPQVVMRNMRQF MSGMKNYLVKHGEGKFHAELESARGRLKADEFLNLDAMLETVMHQLVVLPLREHLYGI FVDYYTRSEDIQLLAQNVRYACEREAADFGIRPTVTPPSQTALRLIANLLWRLQEAEL PLDKLELFLCVISTVFDATGCPRGQQLGADDFLPVLVYVVAKCGFVGAEIEAEFMWGL LQPTLLNGEPGYYLTALCSAVQVLKTFMASEGESGSGSLDWRSSCLPACSSVLRVIIP DECNGSLQTRTLPVRPHTTTREVCRIIAHKARITNPQDYALFKLVDGEETLLSDAECP QDARLAAKGKHCMLAYKRIDAKIAWPTTQPTGH" misc_feature 1690..1986 /gene="LOC111066365" /note="Vacuolar sorting protein 9 (VPS9) domain; Region: VPS9; pfam02204" /db_xref="CDD:460489" misc_feature 2056..2310 /gene="LOC111066365" /note="Ras-associating (RA) domain of Ras and Rab interactor (Rin) protein family; Region: RA_Rin; cd01776" /db_xref="CDD:340474" ORIGIN 1 cacactacaa aatccatcca gaagtgtgga gaaagaggat agaagaggcc gccccattat 61 cgatagacga cagcaggcaa gttggaacgc gatcgcaatc gaagtctatc gaaccgcatc 121 tgcatctgca ttcgcgtgtg ccgatgagaa acctgcgttt ccgccaattc gtattagctg 181 gcaaaaatcg cttgagaatc caccatgagc tggttcagaa gatcgtcgcg tgcacagacc 241 gggagccaat cggaatcgga tcgggacaag gataacgata cagaaaagga tggaaatgct 301 gatgctgatg ctaaaccaga catgtccaaa tcgctgagca gcttggatga gcagcgcatc 361 gagcgacttg agcccgagga gttctttcac gatccggacc atgtgcgaca ctacaaggag 421 gaggccatgt tcctcagcat aatggccgag tgggagatca ttgagcatcc gccgcagggc 481 aattactttt cggccgactt tgaggaggag ctgctactcc agagaactca gccacagcca 541 cagtcaccgt ctcagccaga tctgatgaca tctctgcccg acttggacac cacagcaatg 601 aaggagaagc aaccaaaggg cagacgcaag cgcaagttcc tggagctgct ctttgtggac 661 aacattcaga cgggcattgc gctgcccatc cagggcatgg gacaggagct gccgtcgccc 721 agttctgtgc tctgtaaaaa atccaaatat accaccagca gcaccaacaa cacggccacc 781 tgtccgcaac aggtgctcaa agactgccgc atcaatcgca cacaactgaa gactgaggca 841 ctcgccggct ccatcatggg ggccatcggc aagtgtccaa atcccacggc agagggcagc 901 gtggccagca cccagcagat ccacacggac agctgtcatc cgggcgagct gaacacctgc 961 gatcactacg acatcaagca gttcttccac ctggacgaac gtggcaatat tctgctcaac 1021 atgacgcaca ttgtggagtt ccgggcctgg ggtttggccc tccagggcca gagtcgtcgc 1081 ctctatcgac gctatcgccg cggctgcgag tgcgccgacg aggattattg ccgcaaacgt 1141 ggctgctgct atctgctgcg ccgcctactc cggctactgt gtgagctaat cgttggtcac 1201 ccccgcaaca agatgaacat ccagagcagc ggccccggcg actcactgcg cgcgtacacg 1261 ctgcagctgg cccaggaccc cagctccacc tttgcccgca acatcgagaa cttcatcagc 1321 tgcaccaagg agtcgcgcga ggcggcgccc caggtggtca tgcgcaacat gcgacagttc 1381 atgagcggca tgaagaacta tctggtgaag cacggcgagg gcaagttcca tgccgaactg 1441 gagtcggccc gcggccgact gaaggccgac gagttcctca atctggacgc catgctggag 1501 acggtgatgc atcagctggt ggtgctgccg ctgcgcgagc atctctatgg catcttcgtg 1561 gactactata cgcgcagcga ggacattcag ctgctggccc agaacgtgcg ctatgcctgc 1621 gaacgggagg cggccgactt tggcatccgg cccaccgtca caccgccctc gcagacggcc 1681 ctgcgactga ttgcgaattt gctgtggcgc ctgcaggagg ccgagctgcc gctggacaag 1741 ctggagctct tcctgtgcgt catctcgacg gtgttcgatg cgacgggctg tccccggggc 1801 cagcagctgg gcgccgatga cttcctgccc gtgctcgtct atgtggtggc caagtgcggc 1861 tttgttggcg ccgaaatcga ggcggagttc atgtggggcc tgctccagcc gacgctgctc 1921 aatggggagc cgggctacta cctcaccgcc ctctgcagcg ccgttcaggt gctcaagacg 1981 ttcatggcct ccgagggcga gagcggcagt ggatccctcg actggcgctc cagctgcctg 2041 cccgcctgct ccagcgtgct gcgggtgatc ataccggatg aatgcaacgg ctcgctgcag 2101 acccggacac ttcccgtgcg gccgcacacg acgacgcgcg aggtgtgccg catcattgcc 2161 cataaggcac ggatcaccaa tccgcaggac tatgccctgt tcaagctggt cgacggtgag 2221 gagacgctgc tcagcgatgc cgagtgcccg caggatgcac gcctggcggc caagggcaag 2281 cactgtatgc tcgcctacaa gcggatcgat gcgaagatcg cctggcccac cacacagccg 2341 acaggacatt gagcagcagc agcaacagca acagaatctg aaactgaaac taaatctgaa 2401 tcagcatcct ttcctgccct gccctgaccg gccctaccct gccccatctt gctcactaac 2461 caagcatatt tgattaataa tttattatta ttacattaaa atatacttag tagcctgtaa 2521 gtaaagctaa ttaacgctaa ttaattagaa aacatctaat gtgtactaaa caacagtatt 2581 gagttaagcg tcgtgttttt tttatcatca tcatcaccct atccccagga accccctccc 2641 taccccgttc ctgcaccccg ttcttttt