PREDICTED: Drosophila obscura protein sprint (LOC111066365),
LOCUS XM_041591916 6094 bp mRNA linear INV 14-MAY-2021
transcript variant X1, mRNA.
ACCESSION XM_041591916
VERSION XM_041591916.1
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6094
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..6094
/gene="LOC111066365"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 10 Proteins, and 98% coverage of
the annotated genomic feature by RNAseq alignments"
/db_xref="GeneID:111066365"
CDS 283..5778
/gene="LOC111066365"
/codon_start=1
/product="protein sprint isoform X1"
/protein_id="XP_041447850.1"
/db_xref="GeneID:111066365"
/translation="MSHDTATNVGGGAAGAGAGAGGAPSVVECSDASSKVEVIVYTKS
DKTLKQNMNAKDETLRKRTSLIIVPQQVDVDDDDDPNQNQMQTHGNATSKQEELLLEN
GNRNSIASMDSNQSSASSTRTTSSSSSSSSGSTTSEDAHAAYEDLQNGNAGPPPPRSI
SNLSSSSSESTSCSSSVDYSLREQLKNLANRSGAETADRHSLPTNAGGLQLLKAMPSA
TGPHCDALLSPQEAPLGRRYAEVSQFKAHGKARTSEPLASVAIGGVVTAAPQSNAAES
VNGGNSANTASTNNNNNNNNNNINSSNNNHNGQQSQKSQQQQQQQQQSNLQNGVNVGS
MTTSSGTSHGAAAAVAVESSNQNGDSRSHRHSSSLEPTTDIEDVVDMAQGGDVFEDDT
EALLPKCSRRSRDELSQSRTSLVSSSEGGILAEGETSSEDERDEETSRDSSDNSPPCD
LGLGERLLLTHPMWFLPGIQRSGAVHLLQGKEEGTFIVRGSSQPNTMAVSVRLPLDTG
PYIEHYLIQSHDNVLSLESSRFTFGSIPSLIAHYAQCCDELPVQLMLPRLLREANNRK
KLSSLALLGQEFWSYASSPAVLGPPTLVGPSRAAPQDTQSCDAKSPLSLTETSGLGTA
TFFSDAGPKPPATAPPAPGGNGNGSLFSPTGSGQLMGFFSQAGTPSDTTNSSMSSFTT
SGGQHMQLLSPNSVDSVILTMSPVEGQGPAGYLPPGGPPPPISCPLAGTAAAAAGIGQ
QMSTFKVLPIEGGGGGGAGAVDQVRPQRPKPPNTLNLKPPAPPLRWSKPHSPDQLANG
NGNGNGNGNSNFTVTTTVTFSMESGNGSSGGGGIGGNTGGKFVEVTTPASSNPFNALL
NGQASTFQTFAKRLSPEGECKDTLSSQGSSSTNDSRWQLHSSRDSSHRKILSPQTPNS
SSSGGGGGGGGKSRKSRAGKESQHYKESDILESPPLQYCASALSDKISDYEDVWSHDP
SDRASLLTSFKPTPQDGVLNRRPDLLAETPSTPTAQTLPHLTPCEEETIGDAAAAAAA
KDSSQQLLQFSGDAPPRSRAGLLLPNLSLVGSQATAPPPAMSQSLTEPGDDGGEITPT
AAQTPGSRSKQGSPFYAEPADALRQAGLTSAATAILRRQHRSQVMHANQRHSEPLKGG
LGGTTAALLLPSDLEKLAGSLDELKQKPQQQQQHQQQHQQQPTTKRARNRIDHWQLDS
SWEFMAKQDTTGEAYDASVQDWQEKENSLGRDKDGGLGKKRPPLTVHQIIAKRLPDLN
LPELVRCSTPPQTMAGNGTATGAAPLQPLVQGQERDGSGSQKSFQSQNVGCRLSSYDN
VFCQNSMFGGIDSAQSDDGTIFSEPWDSSQWDSFLPHDDTTLNSDTIHLSKCRPALSE
DDTIVEELSSTKDGSNSSCNQDTLKANRNGAGHHNHNHNHNNCSAKANSRPKVATILR
NPSMRDREVLCHPRNKMNIQSSGPGDSLRAYTLQLAQDPSSTFARNIENFISCTKESR
EAAPQVVMRNMRQFMSGMKNYLVKHGEGKFHAELESARGRLKADEFLNLDAMLETVMH
QLVVLPLREHLYGIFVDYYTRSEDIQLLAQNVRYACEREAADFGIRPTVTPPSQTALR
LIANLLWRLQEAELPLDKLELFLCVISTVFDATGCPRGQQLGADDFLPVLVYVVAKCG
FVGAEIEAEFMWGLLQPTLLNGEPGYYLTALCSAVQVLKTFMASEGESGSGSLDWRSS
CLPACSSVLRVIIPDECNGSLQTRTLPVRPHTTTREVCRIIAHKARITNPQDYALFKL
VDGEETLLSDAECPQDARLAAKGKHCMLAYKRIDAKIAWPTTQPTGH"
misc_feature 1639..1932
/gene="LOC111066365"
/note="Src homology 2 (SH2) domain; Region: SH2; cl15255"
/db_xref="CDD:472789"
misc_feature order(1693..1695,1747..1749,1819..1821,1825..1827)
/gene="LOC111066365"
/note="phosphotyrosine binding pocket [polypeptide
binding]; other site"
/db_xref="CDD:198256"
misc_feature order(1822..1824,1903..1905)
/gene="LOC111066365"
/note="hydrophobic binding pocket [polypeptide binding];
other site"
/db_xref="CDD:198256"
misc_feature 5116..5412
/gene="LOC111066365"
/note="Vacuolar sorting protein 9 (VPS9) domain; Region:
VPS9; pfam02204"
/db_xref="CDD:460489"
misc_feature 5482..5736
/gene="LOC111066365"
/note="Ras-associating (RA) domain of Ras and Rab
interactor (Rin) protein family; Region: RA_Rin; cd01776"
/db_xref="CDD:340474"
ORIGIN
1 ggcttgtctc ttttgcgccg tcgttcggtt cgctcgtcgt cgcggtctct acgctcaatt
61 ttcgatgcga tttcgcgaat tttgtgtttg caaactatga aaatgccagt gaaaatgtgc
121 ttaatcatgc acaaggttgc attttaaaca attgatgaaa ccattttcgc ctgcaaaaga
181 acttatcgtc agcgagaaag caggagagag agagggagag agagtaagcg agaaagagag
241 aaccaacaca caagaaagaa aagctttttg ctcatcacga gaatgtcgca cgacacggcc
301 acaaacgtcg gaggaggagc agcaggagca ggagccggag caggaggtgc tccatctgtg
361 gtggagtgca gcgatgcctc ctccaaggtg gaggtgattg tctacacaaa gtcggacaag
421 acactcaaac agaatatgaa cgccaaggat gagacgctca ggaagcgcac atccctgatc
481 attgtgccac agcaggtgga tgtagacgat gatgatgatc caaatcagaa tcagatgcag
541 acccatggca atgccacatc taaacaggag gaattgctgc tggagaatgg caatcgcaat
601 tcgattgcca gcatggacag caatcagtca tcggcctcca gtacgaggac taccagtagc
661 agcagcagca gcagcagcgg tagcaccact tcggaggatg cccatgccgc ctatgaggat
721 ctacagaatg gcaacgctgg cccaccccca ccacgctcca tctccaactt gagctcctcc
781 tcctccgagt ccacctcctg ctccagctcc gtggactact ccctgcggga gcagctcaag
841 aacctagcca atcgcagtgg ggccgagacc gccgatcggc actcgctgcc caccaatgct
901 ggtggcctac agctgctcaa ggccatgcca tcagccactg gcccgcactg cgatgctctg
961 ctcagtcccc aggaggcgcc cctgggcaga cggtacgccg aagtgtcaca attcaaggca
1021 cacggcaagg cgagaacaag tgaaccgcta gcatcggtgg ccattggtgg agttgtgaca
1081 gccgcaccac agagcaacgc ggcggagtca gtgaacggcg gaaactctgc caacactgcc
1141 agcaccaaca acaataacaa caacaacaac aataatatca acagcagcaa taacaatcac
1201 aatggccaac agtcacaaaa atcccaacag cagcagcagc agcagcagca gtcgaacctt
1261 cagaacggag taaacgttgg ctccatgacc acatcctccg gcacaagcca tggggcggcg
1321 gcagcggtgg cggtggaatc atcgaatcag aacggagaca gccgcagcca tcggcacagc
1381 agcagcctgg agccaacaac ggacatcgaa gatgttgttg acatggccca aggcggcgat
1441 gtcttcgaag atgacacaga ggccctgctg cccaagtgtt cgcgccgatc ccgggatgag
1501 ctcagtcagt cacgcacatc tctggtgtcg agctccgagg gcggcatcct ggccgagggc
1561 gaaacctcca gcgaggatga acgcgatgag gagaccagtc gcgattccag cgacaattcg
1621 ccgccctgcg atctgggtct gggcgagcgg ctgctgctca cccatcccat gtggttcctg
1681 ccgggcatcc aacgttcggg ggccgttcat ctgctgcagg gcaaggagga agggaccttc
1741 attgtgcgcg gctccagtca gcccaacacg atggccgtgt cggtgcgcct gcccctggac
1801 acgggcccct acatcgagca ctatctgatc cagtcgcacg acaatgtgct cagcctggag
1861 agctcgcggt tcacgttcgg ctcgataccc tcactgatcg cccactatgc ccagtgctgc
1921 gacgagctgc ccgtccagct gatgctgcca cggctgctgc gcgaggccaa caaccgcaag
1981 aagctctcct cgctggccct gctcggccag gagttctgga gctatgccag cagtcccgcc
2041 gtcctcggtc cgcccacgct agtgggcccc tcaagggcag cgccacagga cacccaatct
2101 tgcgatgcca agtcgccgct gtcccttacg gagacgagcg gtctgggcac ggcaactttc
2161 ttcagcgatg cagggccaaa gcccccggcc acagcgcccc cggcacccgg tggtaatggc
2221 aatggcagcc tctttagtcc cacgggcagc ggacagctga tgggcttctt cagccaggcg
2281 ggcacgccct cggacacgac aaactccagc atgagctcgt tcaccaccag cgggggccag
2341 cacatgcagc tgctgagccc caattccgtg gactcggtta tactgaccat gtcgcccgtg
2401 gagggccagg ggccagccgg atatctgccg ccaggagggc cgccgccgcc catctcctgc
2461 ccactggctg gaacagccgc agccgcagcc ggcatcggcc agcagatgag caccttcaag
2521 gtgctgccca tcgagggagg aggaggagga ggggcaggtg ctgtcgatca ggtgcgtccg
2581 caacgtccga agcctccaaa cacattgaat ctcaagccgc cggcgccacc gctgcgctgg
2641 tccaagcccc actcgccgga tcagctggcg aatggcaatg gcaatggcaa tgggaatggg
2701 aacagtaatt tcacggtgac caccaccgtc accttctcca tggagagcgg caatgggagc
2761 agcggaggag gaggcattgg aggcaacact gggggcaagt ttgtcgaggt gacgacaccc
2821 gcctccagca atcccttcaa cgctttgctc aatggccagg ccagcacctt tcagacgttc
2881 gccaagcgcc tgtcgcccga gggcgagtgc aaggacacgc tgtcctcgca gggctcctcc
2941 tccaccaacg acagccgctg gcagctgcac tcgagccgcg actccagcca caggaagatc
3001 ctctcgccgc agacacccaa cagcagcagc agcggtggcg gcggcggcgg tggtggcaag
3061 tcgcgcaaat cacgcgccgg caaggagtca cagcactaca aggagtcgga catactcgag
3121 agcccgccgc tgcagtactg cgccagcgcc ctcagcgaca agatcagcga ctacgaggac
3181 gtgtggtcgc acgaccccag cgacagggcc agtctgctga ccagcttcaa gccaacgccc
3241 caggacgggg tgctgaaccg tcgacccgat ctgctggccg agacacccag cacacccaca
3301 gcccaaacac tgccgcatct gacgccctgc gaggaggaga ccatcggcga cgctgccgcc
3361 gccgccgccg ccaaggacag cagccaacag ctgttacagt tctctggcga tgcgccgcca
3421 cgctctcggg ccggtctgct tttgccaaat ttaagcctag tcggcagcca ggcaacagcg
3481 ccgccgccag ccatgagcca gtcactgacc gagccgggcg acgatggcgg tgagatcaca
3541 ccgacagcgg cacagacacc gggatcgcgc agcaaacagg gcagcccctt ctacgcggag
3601 ccagcggatg cactacgaca ggcgggcctg accagtgcgg ccacggccat attgcggcgc
3661 cagcatcgca gccaggtgat gcacgccaat cagcggcact cggagccgct caagggagga
3721 ctgggcggca caacggccgc cctgctgctg cccagcgacc tggagaagct ggcaggcagc
3781 ctggacgagc tgaagcagaa gccacagcag cagcagcagc accagcagca acatcagcag
3841 cagccaacga caaagcgggc acgcaaccgc atcgatcact ggcagctgga cagcagctgg
3901 gagtttatgg ccaagcagga tacgacggga gaggcatacg acgcctcggt gcaggactgg
3961 caggagaagg agaactcgct gggacgcgac aaggatgggg gactgggcaa gaagaggccc
4021 ccactgacag tccaccagat cattgccaag cgactgcccg acctcaatct gccggaattg
4081 gttcgctgtt cgacgccacc gcagacgatg gccggcaacg gcaccgccac cggtgccgcg
4141 ccactgcagc cgctggttca gggccaggag agggatggca gcggcagcca gaagtcattc
4201 cagagccaga acgtcggctg tcgcctctcc tcatacgaca atgtcttctg ccagaactca
4261 atgttcggtg gcatcgattc ggcccagtcc gacgatggca ccatattctc agagccctgg
4321 gactcatccc agtgggactc gttcctaccc catgacgaca ccaccctcaa ttcggacacc
4381 attcatctgt ccaagtgcag gcccgccctg tccgaggacg ataccattgt cgaggaactc
4441 agcagcacca aagacggcag caacagcagc tgcaaccagg acacgctcaa ggccaacagg
4501 aatggtgctg gacaccacaa ccacaatcac aatcacaaca attgcagcgc caaggccaac
4561 agtcgaccca aagtggccac cattctgcgg aatcccagca tgcgggatcg tgaagtctta
4621 tgtcaccccc gcaacaagat gaacatccag agcagcggcc ccggcgactc actgcgcgcg
4681 tacacgctgc agctggccca ggaccccagc tccacctttg cccgcaacat cgagaacttc
4741 atcagctgca ccaaggagtc gcgcgaggcg gcgccccagg tggtcatgcg caacatgcga
4801 cagttcatga gcggcatgaa gaactatctg gtgaagcacg gcgagggcaa gttccatgcc
4861 gaactggagt cggcccgcgg ccgactgaag gccgacgagt tcctcaatct ggacgccatg
4921 ctggagacgg tgatgcatca gctggtggtg ctgccgctgc gcgagcatct ctatggcatc
4981 ttcgtggact actatacgcg cagcgaggac attcagctgc tggcccagaa cgtgcgctat
5041 gcctgcgaac gggaggcggc cgactttggc atccggccca ccgtcacacc gccctcgcag
5101 acggccctgc gactgattgc gaatttgctg tggcgcctgc aggaggccga gctgccgctg
5161 gacaagctgg agctcttcct gtgcgtcatc tcgacggtgt tcgatgcgac gggctgtccc
5221 cggggccagc agctgggcgc cgatgacttc ctgcccgtgc tcgtctatgt ggtggccaag
5281 tgcggctttg ttggcgccga aatcgaggcg gagttcatgt ggggcctgct ccagccgacg
5341 ctgctcaatg gggagccggg ctactacctc accgccctct gcagcgccgt tcaggtgctc
5401 aagacgttca tggcctccga gggcgagagc ggcagtggat ccctcgactg gcgctccagc
5461 tgcctgcccg cctgctccag cgtgctgcgg gtgatcatac cggatgaatg caacggctcg
5521 ctgcagaccc ggacacttcc cgtgcggccg cacacgacga cgcgcgaggt gtgccgcatc
5581 attgcccata aggcacggat caccaatccg caggactatg ccctgttcaa gctggtcgac
5641 ggtgaggaga cgctgctcag cgatgccgag tgcccgcagg atgcacgcct ggcggccaag
5701 ggcaagcact gtatgctcgc ctacaagcgg atcgatgcga agatcgcctg gcccaccaca
5761 cagccgacag gacattgagc agcagcagca acagcaacag aatctgaaac tgaaactaaa
5821 tctgaatcag catcctttcc tgccctgccc tgaccggccc taccctgccc catcttgctc
5881 actaaccaag catatttgat taataattta ttattattac attaaaatat acttagtagc
5941 ctgtaagtaa agctaattaa cgctaattaa ttagaaaaca tctaatgtgt actaaacaac
6001 agtattgagt taagcgtcgt gtttttttta tcatcatcat caccctatcc ccaggaaccc
6061 cctccctacc ccgttcctgc accccgttct tttt