PREDICTED: Drosophila obscura ceramide synthase (LOC111066374),
LOCUS XM_041591913 2002 bp mRNA linear INV 14-MAY-2021
mRNA.
ACCESSION XM_041591913
VERSION XM_041591913.1
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2002
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2002
/gene="LOC111066374"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 1 Protein, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111066374"
CDS 244..1617
/gene="LOC111066374"
/codon_start=1
/product="ceramide synthase"
/protein_id="XP_041447847.1"
/db_xref="GeneID:111066374"
/translation="MHLRRNGQSLPSVEPENVKGQCSGSETAAPGAAACSQDDGTDAK
APVRPRHGCYFSLAFSIGSMGLACGSLWQIPNTTDRITLQRGLFLTSLGFIYFVSLTD
FCNKYLLETRRGQEFRRKYRLMMSDVLEITNKIVSAIQASFSFLVGLIVCKSTCTKSF
VYASHFLMEAYGWFGTAYFMYDIWSMYKVHTQKIADKLHLLRLTKGQEQGQGQGQGHA
SLLVNGHVRSHCEATNGRGREATGAGGNNNGSTPGTPREICDYDGACVQIPKDGRWDF
LKYVLTHPVMMIHHVFIGTFGLLVVTYIRGGGHCIYSYMFMMEFSTPFVSLRSILSTM
RLKESRVYIANGLLMLATFFVCRVCMWPYVMWRYSLAIEAATLWSAMSGLPRGCLVSI
AILFLPQLYWFYLMVLGALKVFLPKRRPPATLKNGQPPDATATPISPTRPTTPTTPTT
AIINGKN"
misc_feature <1090..1485
/gene="LOC111066374"
/note="TRAM, LAG1 and CLN8 homology domains; Region: TLC;
smart00724"
/db_xref="CDD:214789"
ORIGIN
1 atttatgtac atatgtatag cttacaattg tttttttttt tttgccacaa tgcaaccgtg
61 tcacgcctag tccgccccga tcagccagca cgccgcagtc agcccagcca ccgtccaggc
121 aacaggttgt aagccagcca gccagccccc catatcgatc tcccattccg gatcagccat
181 caagcagagg cgaggcgcca taacaaacat aatcgtccgc ccctctcccc cctcaggagg
241 aagatgcatc tgcgacgcaa tggacagtcg ctgccctcgg tcgagccaga gaatgtgaag
301 gggcaatgca gtggcagtga aacagcagcc cccggcgccg ccgcctgcag ccaggatgat
361 gggaccgatg caaaagcgcc ggtcaggccg cgtcacggtt gctacttttc gctggccttc
421 tccattggat cgatgggtct ggcgtgcggc agcctctggc agataccgaa caccaccgac
481 aggatcactc tgcagcgggg actctttctg acgtccctgg gattcattta ctttgtatcg
541 ctgacggatt tctgcaataa gtatctgctg gagacgcggc gcggtcagga gtttcggcgc
601 aagtatcgcc tcatgatgtc cgatgtcctg gaaattacca acaaaatcgt ttcggccatt
661 caggcatcgt tctcctttct ggtgggcctc atcgtttgca aatccacgtg cacaaaatca
721 tttgtctacg cctcgcactt cctgatggag gcctacggct ggttcggcac cgcatacttt
781 atgtacgaca tttggtccat gtataaggtg cacacccaga agatagccga caagctgcat
841 ttgttgcgcc tgaccaaggg ccaggaacag ggccagggac agggacaggg acatgcatca
901 ttgttggtca atggtcatgt gaggagccac tgtgaggcga ccaatggcag gggcagggag
961 gcaactggcg cgggcggcaa caacaatggc agcactccgg gcactccgcg tgagatctgt
1021 gactatgatg gcgcctgtgt gcagataccc aaggacgggc gctgggactt cctcaagtat
1081 gtgctaacgc atccggtcat gatgatccat cacgtattta tcggcacctt tggcctgctg
1141 gtggtcacgt acattcgtgg tggcggccat tgcatctaca gctacatgtt catgatggag
1201 ttctccacgc cgtttgtgtc gctgaggagc atcctgagca cgatgcggct taaggaatcg
1261 cgcgtgtata tcgccaacgg tctgctcatg ctggccacct tctttgtgtg ccgcgtctgc
1321 atgtggccgt atgtgatgtg gcgctacagc ctggccattg aggcggccac cctatggtcg
1381 gccatgagcg gcctgccacg gggctgtctg gtcagcattg ccatactctt cttgccgcag
1441 ctctattggt tctatctgat ggtattgggc gctctcaagg tttttctgcc gaaacggagg
1501 ccgccggcga cactaaagaa tggacaacca ccggatgcga cagccactcc cataagtccc
1561 acaaggccca ctacgcccac cacacccacc accgccataa taaatggcaa gaactagtgc
1621 aaaatcgatg attagttttt gttttgtttt gttaagctaa gcgaatggaa agctctagct
1681 atttatgtat ttatattgag gcgcagctat gtatgtcccc tacagctgtt acttatacaa
1741 gtttatacaa gtgccctcct gcaccaccac accccagcag ccaggtataa tgccactgct
1801 ataaaccaac atataaccga ataaccaacg aattaaatac ggacacggat ataccgaaga
1861 tacggacaac agacaacagg acacacagag gaggaggtac ccgagccccg ggcgtgcgta
1921 gacagatatt tagtttttaa acaaaagaca ttatgtacta aaaacaaaaa aacaaaacgg
1981 ataaacgaaa agatcaaagt ta