PREDICTED: Drosophila obscura potassium voltage-gated channel
LOCUS XM_041591907 2417 bp mRNA linear INV 14-MAY-2021
protein Shaker-like (LOC121403873), transcript variant X2, mRNA.
ACCESSION XM_041591907
VERSION XM_041591907.1
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2417
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2417
/gene="LOC121403873"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 100% coverage of the annotated
genomic feature by RNAseq alignments, including 10 samples
with support for all annotated introns"
/db_xref="GeneID:121403873"
CDS 1350..2174
/gene="LOC121403873"
/codon_start=1
/product="potassium voltage-gated channel protein
Shaker-like isoform X2"
/protein_id="XP_041447841.1"
/db_xref="GeneID:121403873"
/translation="MFLPSIFLGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMT
TVGYGDMTPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNF
NHVTSCPYLPGTLGQHMKKSSLSESSSDMMDLDDGVESTPGLTDTHPGRSAAAAQFLG
AQQQQQQQQQQQQQQQQQQPASSTSMSMSLDKQLQHPLQQHPLQHPLQQQPYQPQAQA
QPQHSGFKQQSTISTSAAATTSSASTSAGASASGSGATTLTMRHNNALAVSIETDV"
misc_feature 1365..1595
/gene="LOC121403873"
/note="Ion channel; Region: Ion_trans_2; pfam07885"
/db_xref="CDD:462301"
ORIGIN
1 cctgctccta catctttcta tatctactat gtgctctctt ttatctgttt gtctgagtgt
61 ttgtgatgca agtctgtctg tctctaaccc tgccatcaat ctatataccc tttttcatta
121 tctttatctg ttttctctct ctctctctct gctgaagctg tatatctgtc tttatgtttt
181 gcttttgtca ccaaattgta catgctatag tatatatata tgttatgtat ggaagggcgt
241 ccaaggaccc aaaaaaacga gcacacactc agatttgagg cggcgttcca ctctgctctc
301 accccgcgct gtacagttgc tcctctgtaa attgaactga acgatgtgat taagcccagt
361 aagcccttct tagatgttgt actgtgtgat cgctcgcttt tatcccattc cacctcacat
421 agcccaccca aaactcccgc ctcccaaaac tctgtacata aatctttaat atgcagtccc
481 tcattttcat tttatttctc agttccgttc cgttccggtt ccgttcattc ctttatgttt
541 tttccaatcc catccttacc aaacgttttg gcatggtgtc tgtcaaactc ctctttcatt
601 cagtttttct ttctgtcttc atgtggactt cttttcattc gtctttagta ctttaccatg
661 tgtgtgtctc tacccctaca ccccctcctg agccagaatt aattttcatg gcaatttggt
721 ccattgtctg tcctgttggc atttgttcta ccacacaaat actcgtatat caccatagcg
781 agaacaatga ggagctcacc agaagggaac gtgcttttag ttccttcaca ccacacggtt
841 cacatttgga atttctgctt gggaattccg ccggattgca gattggggga ttgcagtaaa
901 tcgcaagtcc tcaatggagt ggtcactggt ccaaacacgt actcgtgaat gaaacaactc
961 tatttgttag ctcaagacaa aactgaaaaa cagcaaaact aaaacagagc cagggctacc
1021 cacttgtctt gcggccgcag ccgaagaagc cgcagccctg gccgcagaca acaagaaaca
1081 gaaagaatgt aacacaaatg agtcgcacac caaaaaaaaa aaaaaaccaa aaaacacacg
1141 gaacacggac gagcttctga cggaccccta agtgacccct gacttaccca caacggacac
1201 acccgaaact ctctcgaaaa aaaaataata tcaataaaac tctttggtta aatgtttatt
1261 ttaaataaaa aagaaaaaat tatttaaaaa aaattaaaaa aaaaaaatta tagcaaacaa
1321 atataagaat ataataccaa tgcaaagcaa tgtttctccc atcaattttt ttaggcgtcg
1381 tactcttctc atcggcggtt tattttgcgg aagctggaag cgagaattcc ttcttcaagt
1441 ccatacccga tgcattttgg tgggcggtcg tcaccatgac caccgttgga tatggtgaca
1501 tgacacccgt cggcgtttgg ggcaagattg tgggatcact gtgtgccatt gctggtgtgc
1561 tgacaatcgc actgccggtg ccggttatcg tcagtaattt caattacttc tatcaccgcg
1621 aaacggacca ggaggagatg cagagccaga actttaatca tgtcactagt tgtccatatt
1681 tgccaggtac actaggtcaa catatgaaga aatcatcgtt gtccgagtcc tcatcggata
1741 tgatggattt ggatgatggt gtcgagtcga cgccgggatt aactgacaca catccaggac
1801 gtagtgcggc agcggctcag tttttgggag ctcagcagca gcaacagcag cagcaacaac
1861 agcagcagca gcagcaacag cagcagccag catcgtcgac ttcaatgtcg atgtcgctcg
1921 ataagcagct ccagcatccc ctgcagcagc atccactgca gcacccacta cagcagcagc
1981 cgtaccagcc gcaggcgcag gcgcagccgc agcatagcgg cttcaagcag cagtccacaa
2041 taagcacgag cgcggcggca acaacgagta gcgccagtac cagcgccggt gccagtgcca
2101 gcggcagcgg cgccaccacc ctcaccatga ggcacaataa tgccctggcc gttagtatcg
2161 agaccgacgt ttgactactg gtgcgaagaa tgttaagtgg tatagaattg gccttgacaa
2221 gagttacgtt ggatgccaga aacgactaca aagaaagctg tttgtattta atttaagtag
2281 aacaaataac aaaacaaatt taatctatgg ctaaattaat ctaaatccta atttatattt
2341 aaactacatt taattaaatt ataaacttaa acttaaacgt gaacaacaca caagcaaaag
2401 catactccca aacccaa