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LOCUS XM_041591906 2420 bp mRNA linear INV 14-MAY-2021 protein Shaker-like (LOC121403873), transcript variant X1, mRNA. ACCESSION XM_041591906 VERSION XM_041591906.1 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2420 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..2420 /gene="LOC121403873" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns" /db_xref="GeneID:121403873" CDS 1350..2177 /gene="LOC121403873" /codon_start=1 /product="potassium voltage-gated channel protein Shaker-like isoform X1" /protein_id="XP_041447840.1" /db_xref="GeneID:121403873" /translation="MFLPSIFLGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMT TVGYGDMTPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNF NHVTSCPYLPGTLVGQHMKKSSLSESSSDMMDLDDGVESTPGLTDTHPGRSAAAAQFL GAQQQQQQQQQQQQQQQQQQPASSTSMSMSLDKQLQHPLQQHPLQHPLQQQPYQPQAQ AQPQHSGFKQQSTISTSAAATTSSASTSAGASASGSGATTLTMRHNNALAVSIETDV" misc_feature 1365..1595 /gene="LOC121403873" /note="Ion channel; Region: Ion_trans_2; pfam07885" /db_xref="CDD:462301" ORIGIN 1 cctgctccta catctttcta tatctactat gtgctctctt ttatctgttt gtctgagtgt 61 ttgtgatgca agtctgtctg tctctaaccc tgccatcaat ctatataccc tttttcatta 121 tctttatctg ttttctctct ctctctctct gctgaagctg tatatctgtc tttatgtttt 181 gcttttgtca ccaaattgta catgctatag tatatatata tgttatgtat ggaagggcgt 241 ccaaggaccc aaaaaaacga gcacacactc agatttgagg cggcgttcca ctctgctctc 301 accccgcgct gtacagttgc tcctctgtaa attgaactga acgatgtgat taagcccagt 361 aagcccttct tagatgttgt actgtgtgat cgctcgcttt tatcccattc cacctcacat 421 agcccaccca aaactcccgc ctcccaaaac tctgtacata aatctttaat atgcagtccc 481 tcattttcat tttatttctc agttccgttc cgttccggtt ccgttcattc ctttatgttt 541 tttccaatcc catccttacc aaacgttttg gcatggtgtc tgtcaaactc ctctttcatt 601 cagtttttct ttctgtcttc atgtggactt cttttcattc gtctttagta ctttaccatg 661 tgtgtgtctc tacccctaca ccccctcctg agccagaatt aattttcatg gcaatttggt 721 ccattgtctg tcctgttggc atttgttcta ccacacaaat actcgtatat caccatagcg 781 agaacaatga ggagctcacc agaagggaac gtgcttttag ttccttcaca ccacacggtt 841 cacatttgga atttctgctt gggaattccg ccggattgca gattggggga ttgcagtaaa 901 tcgcaagtcc tcaatggagt ggtcactggt ccaaacacgt actcgtgaat gaaacaactc 961 tatttgttag ctcaagacaa aactgaaaaa cagcaaaact aaaacagagc cagggctacc 1021 cacttgtctt gcggccgcag ccgaagaagc cgcagccctg gccgcagaca acaagaaaca 1081 gaaagaatgt aacacaaatg agtcgcacac caaaaaaaaa aaaaaaccaa aaaacacacg 1141 gaacacggac gagcttctga cggaccccta agtgacccct gacttaccca caacggacac 1201 acccgaaact ctctcgaaaa aaaaataata tcaataaaac tctttggtta aatgtttatt 1261 ttaaataaaa aagaaaaaat tatttaaaaa aaattaaaaa aaaaaaatta tagcaaacaa 1321 atataagaat ataataccaa tgcaaagcaa tgtttctccc atcaattttt ttaggcgtcg 1381 tactcttctc atcggcggtt tattttgcgg aagctggaag cgagaattcc ttcttcaagt 1441 ccatacccga tgcattttgg tgggcggtcg tcaccatgac caccgttgga tatggtgaca 1501 tgacacccgt cggcgtttgg ggcaagattg tgggatcact gtgtgccatt gctggtgtgc 1561 tgacaatcgc actgccggtg ccggttatcg tcagtaattt caattacttc tatcaccgcg 1621 aaacggacca ggaggagatg cagagccaga actttaatca tgtcactagt tgtccatatt 1681 tgccaggtac actagtaggt caacatatga agaaatcatc gttgtccgag tcctcatcgg 1741 atatgatgga tttggatgat ggtgtcgagt cgacgccggg attaactgac acacatccag 1801 gacgtagtgc ggcagcggct cagtttttgg gagctcagca gcagcaacag cagcagcaac 1861 aacagcagca gcagcagcaa cagcagcagc cagcatcgtc gacttcaatg tcgatgtcgc 1921 tcgataagca gctccagcat cccctgcagc agcatccact gcagcaccca ctacagcagc 1981 agccgtacca gccgcaggcg caggcgcagc cgcagcatag cggcttcaag cagcagtcca 2041 caataagcac gagcgcggcg gcaacaacga gtagcgccag taccagcgcc ggtgccagtg 2101 ccagcggcag cggcgccacc accctcacca tgaggcacaa taatgccctg gccgttagta 2161 tcgagaccga cgtttgacta ctggtgcgaa gaatgttaag tggtatagaa ttggccttga 2221 caagagttac gttggatgcc agaaacgact acaaagaaag ctgtttgtat ttaatttaag 2281 tagaacaaat aacaaaacaa atttaatcta tggctaaatt aatctaaatc ctaatttata 2341 tttaaactac atttaattaa attataaact taaacttaaa cgtgaacaac acacaagcaa 2401 aagcatactc ccaaacccaa