PREDICTED: Drosophila obscura potassium voltage-gated channel
LOCUS XM_041591899 991 bp mRNA linear INV 14-MAY-2021
protein Shaker (LOC111074807), transcript variant X7, mRNA.
ACCESSION XM_041591899
VERSION XM_041591899.1
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..991
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..991
/gene="LOC111074807"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 4 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 4 samples with support for all annotated
introns"
/db_xref="GeneID:111074807"
CDS 16..918
/gene="LOC111074807"
/codon_start=1
/product="potassium voltage-gated channel protein Shaker
isoform X7"
/protein_id="XP_041447833.1"
/db_xref="GeneID:111074807"
/translation="MDAMDAMDAMELSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDH
DFCERVVINVSGLRFETQLRTLNQFPDTLLGDPARRLRYFDPLRNEYFFDRSRPSFDA
ILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDQAINKFREDEGFIKEEERPLPDNEK
QRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTKI
EEDEVPDITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFI
TLATVVAEEEDTLNLPKAPVSPQV"
misc_feature 157..537
/gene="LOC111074807"
/note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
(poxvirus and zinc finger) domain superfamily; Region:
BTB_POZ; cl38908"
/db_xref="CDD:453885"
misc_feature 544..>852
/gene="LOC111074807"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
ORIGIN
1 acattctcat ccgccatgga tgccatggac gccatggatg ccatggagtt gtctttgccc
61 aaattgagca gtcaagacga agaagggggg gctggtcatg gctttggtgg cggaccgcaa
121 cactttgaac ccattcctca cgatcatgat ttctgcgaga gagtcgttat aaatgtaagc
181 gggctgaggt ttgagacaca actacgtacg cttaaccaat tcccggacac gctgctcggg
241 gatccggctc ggagattacg gtactttgac ccgcttagaa atgaatattt ttttgaccgt
301 agtcgaccga gcttcgatgc gattttatac tattatcaga gtggtggccg actacggaga
361 ccggtcaatg tccctttaga cgtatttagt gaagaaataa aattttatga attaggtgat
421 caagcaatta ataaattcag agaggatgaa ggctttatta aagaggaaga aagaccatta
481 ccggataatg agaaacaaag aaaagtctgg ctgctcttcg agtatccaga gagttcacaa
541 gccgccagag ttgtagccat aattagtgta tttgttatat tgctatcaat tgttatattt
601 tgtctagaaa cattacccga atttaagcat tacaaggtgt tcaatacaac aacaaatggc
661 acaaagatcg aggaagacga ggtgcctgac atcacagatc ctttcttcct tatagaaacg
721 ttatgtatta tttggtttac atttgaacta actgtcaggt tcctcgcatg tccgaacaaa
781 ttaaatttct gcagggatgt catgaatgtt atcgacataa tcgccatcat tccgtacttt
841 ataacactag cgactgtcgt tgccgaagag gaggatacgt taaatcttcc aaaagcgcca
901 gtcagtccac aggtatgaga ttctgtttgc ccaatactct tatcttcacg cacacccaca
961 aacacacaga tacacacatg catatatcac a