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LOCUS XM_041591893 2493 bp mRNA linear INV 14-MAY-2021 protein Shaker (LOC111074807), transcript variant X1, mRNA. ACCESSION XM_041591893 VERSION XM_041591893.1 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2493 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..2493 /gene="LOC111074807" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns" /db_xref="GeneID:111074807" CDS 120..2420 /gene="LOC111074807" /codon_start=1 /product="uncharacterized protein DDB_G0283357 isoform X1" /protein_id="XP_041447827.1" /db_xref="GeneID:111074807" /translation="MSGNNGNGNSAPSNEQQQQQQQQTVPTGPAAATSAASAPEAVAG GGSSTRPATAPARTTDPSNNNNNNNNNNNNNSTTSSSSIGYRVDLSHINNNSSNTSSN RQASNNNHNENNTGLVVNTGVTTATAATTATTAAAAAPAATATGNVTATATATSSNNN NHIYVNPHSYDSSTTGSVSGSTAVMLPLPLPLPLPLPLSNPLTLQLPQPQGGGGGDTH LQQQQQLINTGAISRTGTSTSTTLSTLNTYLFPCGASDSAGTLGVGSCDLDSNFSQMV NGAGSSEAGSSLSQSTAPAGLGMGLGVQLGLGFISGRRRIRRLFGVAEPASLGINGGG GGGAGANPYAAATLRRRSSQLGQFGKRRERERERELEEIEQQQRIATVASANAAFLER REMQLQQQQQQQQQQQQQQQQPQIQFMFNPLQMEPQKKKKKKPPGPPAQARQQSSRTM DDPMMNRPRKSTPAKKGKKAAPENPYEKSLPKLSSQDEEGGAGHGFGGGPQHFEPIPH DHDFCERVVINVSGLRFETQLRTLNQFPDTLLGDPARRLRYFDPLRNEYFFDRSRPSF DAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDQAINKFREDEGFIKEEERPLPDN EKQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGT KIEEDEVPDITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPY FITLATVVAEEEDTLNLPKAPVSPQV" misc_feature 1659..2039 /gene="LOC111074807" /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily; Region: BTB_POZ; cl38908" /db_xref="CDD:453885" misc_feature 2046..>2354 /gene="LOC111074807" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" ORIGIN 1 aacaaaaacc aaccaaaata agctcaaaat cggcaaagaa aaactcatgt gaaatgaagg 61 tgtaaccaaa attgcagtaa tttgaagttg caacattctc tgtggcacaa cgaacgacaa 121 tgagtggcaa caatggcaat ggcaacagtg cacccagcaa tgaacagcag cagcagcagc 181 agcagcagac agtcccgact ggtccagcag cagcaacatc agcggcatcg gcgcctgagg 241 cagtggcagg cggtggcagt tcgacgagac ctgccacggc gccggcacgc accaccgatc 301 cgagcaacaa caacaacaac aataataata ataataacaa caacagcacc accagcagca 361 gcagcatcgg ctatagggtg gatctgagcc acataaacaa caacagcagc aacaccagca 421 gcaatcgcca ggccagcaac aacaatcaca atgagaacaa cacggggctg gtggtcaaca 481 ctggtgtcac aacagcaaca gcagcaacaa cagcaacaac agcagcagca gcagcacctg 541 ctgcaactgc aacgggaaat gtaactgcaa ctgccactgc cacaagcagc aacaacaaca 601 atcacatcta tgtgaatccc cacagctacg acagcagcac cacgggcagc gtgagtggat 661 ccacggcggt gatgctgcca ctgccactgc cactgcccct gcccctgcca ctaagcaatc 721 cattgacatt gcaactgcca cagccccaag gaggcggtgg aggagacacc catctgcagc 781 agcagcagca gctaatcaac acgggagcca tcagtcggac gggcacctcc acctcgacaa 841 cgctaagcac cctgaacaca tatctgttcc cttgcggcgc ctcggactcg gcgggcacac 901 tgggcgtggg cagctgcgat ctggacagca atttcagcca gatggtgaat ggagccggca 961 gcagcgaggc gggcagcagc ctcagccaga gcacggcacc cgccggcctg ggcatgggtt 1021 tgggcgtgca gctgggcctg ggcttcatca gtggcaggcg gcgcatccga cggctgttcg 1081 gtgtggcaga acctgccagc ctggggataa acggtggcgg tggcggtgga gccggagcca 1141 atccgtatgc ggcggcaacg ttgcggcggc gcagctcaca gctggggcag ttcggcaagc 1201 ggcgggaacg tgagcgggag cgagagctgg aggagatcga gcagcagcag cgcattgcca 1261 cggtggcctc tgccaatgcg gcatttctcg agcgacgcga gatgcagctc cagcagcagc 1321 agcagcagca gcaacagcaa cagcagcaac agcagcagcc acagatccag ttcatgttta 1381 acccgctgca gatggagccg caaaagaaga aaaagaaaaa gccaccgggt ccgccggccc 1441 aggcccggca gcagtcatcg cgcaccatgg acgatccgat gatgaaccgg ccgcgcaaga 1501 gcacgcccgc caagaagggc aagaaggccg ccccggagaa tccctatgag aagtctttgc 1561 ccaaattgag cagtcaagac gaagaagggg gggctggtca tggctttggt ggcggaccgc 1621 aacactttga acccattcct cacgatcatg atttctgcga gagagtcgtt ataaatgtaa 1681 gcgggctgag gtttgagaca caactacgta cgcttaacca attcccggac acgctgctcg 1741 gggatccggc tcggagatta cggtactttg acccgcttag aaatgaatat ttttttgacc 1801 gtagtcgacc gagcttcgat gcgattttat actattatca gagtggtggc cgactacgga 1861 gaccggtcaa tgtcccttta gacgtattta gtgaagaaat aaaattttat gaattaggtg 1921 atcaagcaat taataaattc agagaggatg aaggctttat taaagaggaa gaaagaccat 1981 taccggataa tgagaaacaa agaaaagtct ggctgctctt cgagtatcca gagagttcac 2041 aagccgccag agttgtagcc ataattagtg tatttgttat attgctatca attgttatat 2101 tttgtctaga aacattaccc gaatttaagc attacaaggt gttcaataca acaacaaatg 2161 gcacaaagat cgaggaagac gaggtgcctg acatcacaga tcctttcttc cttatagaaa 2221 cgttatgtat tatttggttt acatttgaac taactgtcag gttcctcgca tgtccgaaca 2281 aattaaattt ctgcagggat gtcatgaatg ttatcgacat aatcgccatc attccgtact 2341 ttataacact agcgactgtc gttgccgaag aggaggatac gttaaatctt ccaaaagcgc 2401 cagtcagtcc acaggtatga gattctgttt gcccaatact cttatcttca cgcacaccca 2461 caaacacaca gatacacaca tgcatatatc aca