PREDICTED: Drosophila obscura potassium voltage-gated channel
LOCUS XM_041591893 2493 bp mRNA linear INV 14-MAY-2021
protein Shaker (LOC111074807), transcript variant X1, mRNA.
ACCESSION XM_041591893
VERSION XM_041591893.1
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2493
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2493
/gene="LOC111074807"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 5 Proteins, and 99% coverage of
the annotated genomic feature by RNAseq alignments,
including 5 samples with support for all annotated
introns"
/db_xref="GeneID:111074807"
CDS 120..2420
/gene="LOC111074807"
/codon_start=1
/product="uncharacterized protein DDB_G0283357 isoform X1"
/protein_id="XP_041447827.1"
/db_xref="GeneID:111074807"
/translation="MSGNNGNGNSAPSNEQQQQQQQQTVPTGPAAATSAASAPEAVAG
GGSSTRPATAPARTTDPSNNNNNNNNNNNNNSTTSSSSIGYRVDLSHINNNSSNTSSN
RQASNNNHNENNTGLVVNTGVTTATAATTATTAAAAAPAATATGNVTATATATSSNNN
NHIYVNPHSYDSSTTGSVSGSTAVMLPLPLPLPLPLPLSNPLTLQLPQPQGGGGGDTH
LQQQQQLINTGAISRTGTSTSTTLSTLNTYLFPCGASDSAGTLGVGSCDLDSNFSQMV
NGAGSSEAGSSLSQSTAPAGLGMGLGVQLGLGFISGRRRIRRLFGVAEPASLGINGGG
GGGAGANPYAAATLRRRSSQLGQFGKRRERERERELEEIEQQQRIATVASANAAFLER
REMQLQQQQQQQQQQQQQQQQPQIQFMFNPLQMEPQKKKKKKPPGPPAQARQQSSRTM
DDPMMNRPRKSTPAKKGKKAAPENPYEKSLPKLSSQDEEGGAGHGFGGGPQHFEPIPH
DHDFCERVVINVSGLRFETQLRTLNQFPDTLLGDPARRLRYFDPLRNEYFFDRSRPSF
DAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDQAINKFREDEGFIKEEERPLPDN
EKQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGT
KIEEDEVPDITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPY
FITLATVVAEEEDTLNLPKAPVSPQV"
misc_feature 1659..2039
/gene="LOC111074807"
/note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
(poxvirus and zinc finger) domain superfamily; Region:
BTB_POZ; cl38908"
/db_xref="CDD:453885"
misc_feature 2046..>2354
/gene="LOC111074807"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
ORIGIN
1 aacaaaaacc aaccaaaata agctcaaaat cggcaaagaa aaactcatgt gaaatgaagg
61 tgtaaccaaa attgcagtaa tttgaagttg caacattctc tgtggcacaa cgaacgacaa
121 tgagtggcaa caatggcaat ggcaacagtg cacccagcaa tgaacagcag cagcagcagc
181 agcagcagac agtcccgact ggtccagcag cagcaacatc agcggcatcg gcgcctgagg
241 cagtggcagg cggtggcagt tcgacgagac ctgccacggc gccggcacgc accaccgatc
301 cgagcaacaa caacaacaac aataataata ataataacaa caacagcacc accagcagca
361 gcagcatcgg ctatagggtg gatctgagcc acataaacaa caacagcagc aacaccagca
421 gcaatcgcca ggccagcaac aacaatcaca atgagaacaa cacggggctg gtggtcaaca
481 ctggtgtcac aacagcaaca gcagcaacaa cagcaacaac agcagcagca gcagcacctg
541 ctgcaactgc aacgggaaat gtaactgcaa ctgccactgc cacaagcagc aacaacaaca
601 atcacatcta tgtgaatccc cacagctacg acagcagcac cacgggcagc gtgagtggat
661 ccacggcggt gatgctgcca ctgccactgc cactgcccct gcccctgcca ctaagcaatc
721 cattgacatt gcaactgcca cagccccaag gaggcggtgg aggagacacc catctgcagc
781 agcagcagca gctaatcaac acgggagcca tcagtcggac gggcacctcc acctcgacaa
841 cgctaagcac cctgaacaca tatctgttcc cttgcggcgc ctcggactcg gcgggcacac
901 tgggcgtggg cagctgcgat ctggacagca atttcagcca gatggtgaat ggagccggca
961 gcagcgaggc gggcagcagc ctcagccaga gcacggcacc cgccggcctg ggcatgggtt
1021 tgggcgtgca gctgggcctg ggcttcatca gtggcaggcg gcgcatccga cggctgttcg
1081 gtgtggcaga acctgccagc ctggggataa acggtggcgg tggcggtgga gccggagcca
1141 atccgtatgc ggcggcaacg ttgcggcggc gcagctcaca gctggggcag ttcggcaagc
1201 ggcgggaacg tgagcgggag cgagagctgg aggagatcga gcagcagcag cgcattgcca
1261 cggtggcctc tgccaatgcg gcatttctcg agcgacgcga gatgcagctc cagcagcagc
1321 agcagcagca gcaacagcaa cagcagcaac agcagcagcc acagatccag ttcatgttta
1381 acccgctgca gatggagccg caaaagaaga aaaagaaaaa gccaccgggt ccgccggccc
1441 aggcccggca gcagtcatcg cgcaccatgg acgatccgat gatgaaccgg ccgcgcaaga
1501 gcacgcccgc caagaagggc aagaaggccg ccccggagaa tccctatgag aagtctttgc
1561 ccaaattgag cagtcaagac gaagaagggg gggctggtca tggctttggt ggcggaccgc
1621 aacactttga acccattcct cacgatcatg atttctgcga gagagtcgtt ataaatgtaa
1681 gcgggctgag gtttgagaca caactacgta cgcttaacca attcccggac acgctgctcg
1741 gggatccggc tcggagatta cggtactttg acccgcttag aaatgaatat ttttttgacc
1801 gtagtcgacc gagcttcgat gcgattttat actattatca gagtggtggc cgactacgga
1861 gaccggtcaa tgtcccttta gacgtattta gtgaagaaat aaaattttat gaattaggtg
1921 atcaagcaat taataaattc agagaggatg aaggctttat taaagaggaa gaaagaccat
1981 taccggataa tgagaaacaa agaaaagtct ggctgctctt cgagtatcca gagagttcac
2041 aagccgccag agttgtagcc ataattagtg tatttgttat attgctatca attgttatat
2101 tttgtctaga aacattaccc gaatttaagc attacaaggt gttcaataca acaacaaatg
2161 gcacaaagat cgaggaagac gaggtgcctg acatcacaga tcctttcttc cttatagaaa
2221 cgttatgtat tatttggttt acatttgaac taactgtcag gttcctcgca tgtccgaaca
2281 aattaaattt ctgcagggat gtcatgaatg ttatcgacat aatcgccatc attccgtact
2341 ttataacact agcgactgtc gttgccgaag aggaggatac gttaaatctt ccaaaagcgc
2401 cagtcagtcc acaggtatga gattctgttt gcccaatact cttatcttca cgcacaccca
2461 caaacacaca gatacacaca tgcatatatc aca