PREDICTED: Drosophila obscura zinc finger protein hangover
LOCUS XM_041591891 6773 bp mRNA linear INV 14-MAY-2021
(LOC111070669), transcript variant X1, mRNA.
ACCESSION XM_041591891
VERSION XM_041591891.1
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6773
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..6773
/gene="LOC111070669"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 2 Proteins, and 99% coverage of
the annotated genomic feature by RNAseq alignments"
/db_xref="GeneID:111070669"
CDS 350..6529
/gene="LOC111070669"
/codon_start=1
/product="zinc finger protein hangover isoform X1"
/protein_id="XP_041447825.1"
/db_xref="GeneID:111070669"
/translation="MCDTGATTATTTVVAAAAASSVSGTGTSQSQSQGQGTAAASATA
TTTAAGATPPATTTAKPEQQQRARQNCCRLCIAPATECISIINSYAADKEPLSTKIHN
CVNIKITPQDRLSLQICHACISYLNSWQSFKNRSVSAQTKQRQWLEANKSKLLSYLDL
NSAENGGGHQQQQQHHHHQQNQSQSQQHHSENEIDLEKPSAAQILDGIPSLKKRKSLT
VYPLPAIPIKDEPIDTDDDYQMKSLDESDDMVDPTMFLERSEHEGDVPLMTSDYDYTA
QHGVNAETAAASLPPNAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQ
LSTDSPNNTPITKPTPALAAALEIQRAAAEAATEEASKAAGAAGGNISTQKYRQVVMN
AFIKCEGGGFNYDNPEQYQLLLTRDKVEFIEQNYEFLEQYQTMTCRCCDKYFSTYKNF
MAHVRKKYPLLPRNLCFNCLKMNESKALFISHLKKRNCINLYRVLNALRGKQPNFHPT
SSDLGAFGGETTTQISPTVVVPLLLDNSSSGERPEKLRAKELLVNKLYECKLCPKGFR
TKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCD
AKVETHQRFLDHVYQDHLGGISSDNASTVSGMGGGGGGRSSSSIENSPGKRSLLGALG
IGVSSPADESRSGSAAAAAAAAPNQTSTPKPISGGGGGGGVAASCTTPGSLNRDAGGA
PKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLR
EHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVSTGRYDYVMKDLMSITNGGTL
DDDEEETGSMAKKIRLDDSSNNSSLVGGVASQQKECPICNALFSNNIGLSNHMRSHYT
ASNSVNAALVAANRMTPKSLTITAAPATETVTSSAASMDVDDDDEGMLALETGKLMAS
VSGVRGGAASSSATAVAVPPAMVNQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFS
SKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFE
CDVCSIVYSSELELKQHKRSVHKLTSVSVSASASASASASASASTSSKINDDDLMIME
EIGGNRSRHHHHHHQQHHHSKSSGDLADQSIISAVGATATAATTTPLYWYQCKYCPSN
FNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPIECTLCR
KVFFDHQMLDNHTPTCNRKPITSTGAHQQELLTQTNSSQGRAVFRHKTGDDDDEEDVQ
QQQPQHRHQQQRNHQEDAGDGGAAVSATTTTAAATSSGSTKKLRTPEVACTICGARFT
DQEHFSKHIQKHEQDLYVDNPLAAMFDDGPADAAQFKVEGQNENGEYACDMCTKTFPQ
VIALKVHRKWHFRGDSKQNHIDSETTNIINNNNNNSVNNSTSMLRELHAVGLTPNQQQ
QQQQQSQQQNSTSTPNSNSNNNSSSRSNNNNNSSSRSKSMKRKRELKCEYCPSTFISN
NNLRRHMYELHKHEVSSLPAPPVIVVDEPLSCRRCGNLKFETKELWIEHKLADAKVVR
PFCPFQWGCDMCGEYLSRKEKLMNHINNHLKEDVIVPVATQSAIDRERASSGASSASE
ATTSKASGLVEPPPSAAAALQKKTEENGGLDTAEATAAAAEAEAVKAEEDDSEMEDGD
SSDADEESSGTGDEDDDDTEDDDEEDELQDEDDDEDEGEDEEGVPPPTPATQLLQPQH
KHANNIDNDDDLVEEVNSSDDEEPEDGDDDDDDDEEDEDDEETEEVEAEAQGSSQPLM
NGKSEKHQTTPQQQRDEILPSSDEDNEDQDGHPMAIEDIIEEEFDEDDDVEEVYDEQN
VDGGATSSASSSESESTSTTTSNSHSTGERRKKAGDQSSNPSFTCDLCQLCFDSQELL
QSHIKSHFLNGPKISASQATSNATAVAPATATATVTTTATAAAAATTVPSSCNNNAST
KSSKLSPAAAVVAAAVTANTSNNRQRSAATEMGASGSSSSNSN"
misc_feature 560..784
/gene="LOC111070669"
/note="Zinc-finger associated domain (zf-AD); Region:
zf-AD; pfam07776"
/db_xref="CDD:462262"
misc_feature 2606..2671
/gene="LOC111070669"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature 2699..2764
/gene="LOC111070669"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature 3419..3478
/gene="LOC111070669"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275371"
misc_feature order(3434..3442,3446..3451,3461..3463,3521..3523,
3530..3544,3548..3553)
/gene="LOC111070669"
/note="putative nucleic acid binding site [nucleotide
binding]; other site"
/db_xref="CDD:275371"
misc_feature 3506..3559
/gene="LOC111070669"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275371"
misc_feature 3941..4003
/gene="LOC111070669"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature order(3956..3958,3962..3964,3968..3970,3974..3979,
3986..3991,3998..4000,4046..4048,4052..4054,4064..4069,
4076..4081,4136..4138,4142..4144,4148..4150,4154..4159,
4166..4171)
/gene="LOC111070669"
/note="putative nucleic acid binding site [nucleotide
binding]; other site"
/db_xref="CDD:275368"
misc_feature 4031..4087
/gene="LOC111070669"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature 4121..4171
/gene="LOC111070669"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
ORIGIN
1 tcgcagcgtc cggacgtacg tcgatcgcag aatttgtcag ctttattttt tttcttgtgc
61 gatttcgttc tgcctgccaa acgcagcgac agcgacccaa ctgaggagca ggagtaagtc
121 cgatctgctg aagtcgaccg aatgtcgaaa tgaagcgtga cgagagggcg aatgtgctca
181 gcgcaacgaa aagtgggcgc gagtgatacg aaaccgagaa aaagattcga ttcccaattt
241 gtcgcgtcgt tctctcgagc tcaagagaac cgaaaacaac gcgaaataaa agtgaaaacg
301 tgcaaaaggc acagcgcaaa gaaaaacaac aaactaaact tcggtcaaaa tgtgcgacac
361 gggggcaaca acagctacta caactgtggt ggcagcagca gcagcgtcgt cggtgtctgg
421 cactggaacg agccagagcc agagccaggg ccagggaacg gcagcggcat cggctacagc
481 aacgacgaca gcagcaggag ccacaccgcc agctacaacc acagcgaaac ccgagcaaca
541 gcagcgggcg cgacaaaact gctgccgcct ctgcattgcc ccggccacgg aatgcatttc
601 gatcatcaat agctatgcgg ccgacaagga gccgctctct acaaaaatcc acaactgtgt
661 gaacatcaag ataacgccac aagatcggct gtcactgcag atctgtcacg cctgcatcag
721 ctacttgaac tcgtggcaga gctttaagaa tcgctcggtt agcgcacaga ccaaacagcg
781 ccagtggctg gaggccaaca agagcaagct gctcagctat ttggacttga acagtgccga
841 gaatggagga ggtcatcagc agcagcagca gcatcaccac caccaacaga accagtcaca
901 gtcacagcag catcattcgg agaatgagat cgatttggag aagccatcgg ccgcccaaat
961 attggacggc ataccctcgc tgaagaaacg caaatcccta acagtctatc cactgcccgc
1021 aattcccatc aaggatgagc ccattgacac agatgatgat tatcaaatga aatcgttgga
1081 cgaatccgat gacatggtcg atcccacaat gttcctagaa cgctccgagc acgagggcga
1141 tgtaccactt atgacctccg actatgatta tacggcgcag catggtgtga atgcagaaac
1201 agcggccgcc tcgctgccgc ccaatgctgt ggctaatgtg gccgccgccg gggactcaaa
1261 ggtggccagc tgccgggcat gcagtctcca gttttcgacg cgtgccaatg cccgacgcca
1321 tgagcgaaat ttgcacccaa atctattcca attgtcgaca gactcgccca acaatacgcc
1381 catcacaaag cccacaccgg cactggcggc tgcattggag atacagcgtg ccgctgcgga
1441 ggcggccacc gaggaggcca gcaaagctgc cggcgctgcc gggggtaata tatcgaccca
1501 aaagtatcgt caggtggtga tgaatgcctt catcaaatgc gagggtgggg gcttcaacta
1561 tgacaatccg gagcaatatc agctgctgct cacccgcgac aaggtggagt ttatcgagca
1621 aaattatgaa ttccttgagc agtaccagac gatgacatgc cgctgctgcg acaaatactt
1681 tagtacgtac aagaacttta tggcgcatgt gcgtaaaaag tatccgctgt tgccgcgtaa
1741 tctctgcttc aactgcctca agatgaacga atcgaaggcg ctgttcattt cacatctcaa
1801 gaagcgcaac tgcatcaatc tgtatcgtgt gctgaacgcc ctgcgcggca agcagccaaa
1861 ctttcatccc acatcatcgg acctgggtgc attcggtggc gagacgacga cccaaatcag
1921 tcccactgtc gttgtgccgc tgctgctcga taacagctcg agcggcgaac ggccggagaa
1981 gctgcgcgcc aaggagctgc tggtgaataa gctttacgag tgcaaactct gccccaaggg
2041 cttccgcacc aagcacgagt ttcgcaccca tgtgtacgac aagcatgcgg atgtgcagcg
2101 caaggacaac aattcgatac agtgcagctt ctgtggcctg gactttgccg atcccgtgga
2161 caggcgacgc cactacaaca atatggactg cattgtccgg ctacgctgca tgacgtgcga
2221 cgccaaggtg gagacgcatc agcgtttcct cgatcatgtc tatcaggatc atttgggagg
2281 tataagcagc gataatgcct ccactgtcag tggaatgggc ggaggtggcg gtggtaggag
2341 cagcagcagt attgagaact cacctggcaa gcggagtcta ctgggtgccc ttggaattgg
2401 agttagctcc cccgccgatg agtcacgcag cggcagtgca gcagcggcag cagcagcagc
2461 acccaatcaa acctcaacgc caaagcccat atcgggagga ggtggtggtg gtggtgtggc
2521 ggcgtcttgc acaacacctg gctccctaaa tcgtgacgcc ggtggtgcac caaaatcgca
2581 gtatttctca cgaatgccac aggtatgccc catctgtggc cagcagtaca acaactacaa
2641 caacgttctg cgtcacatgg aatcgaagca tccaaacaaa ctgccggaga catacaaatg
2701 cgtgcgttgc ggcctgggct atccaagaat ctcgtatctg cgggagcaca tgatcaatgt
2761 gcatggcgtc gacaagaatc gacattccgg tggctttgaa tacattgtga atgcggatgc
2821 cgtcaagctg gccgatggca gtacaccgaa tgtatccaca ggtcgttacg actatgtgat
2881 gaaggatctg atgtcaataa caaatggtgg gacactcgat gatgacgagg aggagaccgg
2941 cagcatggcc aagaagatac gcctcgacga tagcagcaac aacagcagtc tggtgggtgg
3001 cgtggccagc cagcaaaagg aatgccccat ctgcaatgcc ctgttcagca acaatattgg
3061 cctgtccaat cacatgcgct cacattacac ggcctcgaat tcggtgaatg ccgctctggt
3121 ggcggccaat cgcatgacac ccaaatcgct gaccataacc gccgccccag ccacagagac
3181 ggtcacatca tcggcagcct ccatggatgt ggatgatgat gatgagggta tgctggcgct
3241 cgaaacagga aagctgatgg ccagcgtcag tggtgttaga ggtggtgctg cttctagttc
3301 ggctactgct gttgctgtgc cccctgccat ggttaatcag acgcctcagg agcaggccgt
3361 attccgtcgt agccttgatc aggcggcgga tcgtcgcttt cgccggatgc gctgccgcat
3421 ctgtcagcgg cgttttagct caaagaaatc gtaccgctat cacatgctga ccgaccatca
3481 agtgcagaat gtgcagttca tcaaatgcaa gctgtgcaat gccgagtttg cctacgagaa
3541 gggtctgaag gtgcatctgt tcaaggtgca cggacgtgcg atcaaggatg agatgattgt
3601 gaagcagttt gagtgcgatg tctgttcgat tgtctacagc tcggagctgg agctgaagca
3661 gcacaagagg agtgtccata agctaacgtc cgtgtcggtg tctgcatctg cctcggcatc
3721 ggcttcggcc tctgcctctg catccacatc ctcgaaaatc aatgatgatg atttaatgat
3781 catggaggag attggtggca atagaagccg tcaccatcac catcatcatc agcagcacca
3841 ccacagcaag tcgtctggcg acttggccga tcagtccatc atttccgctg tgggtgccac
3901 agccactgcc gccacaacga cgccgctgta ctggtaccaa tgcaaatact gtccctccaa
3961 ctttaacaca aacaaaaagc tggccatcca catcaactcg cacgatgagt tcgactcgaa
4021 tgattattcg tgcaaggact gcggcaatgt ctatagcggc cgcaagagtc tatgggttca
4081 tcgctacaaa aagcatccgc aggtgcccga ccccatcgag tgcacgctgt gccgcaaggt
4141 gttctttgac catcagatgc tggacaatca tacgccaacc tgcaaccgca aaccgattac
4201 ctccacgggg gcgcatcaac aggagctgct tacgcagaca aattcatcgc agggtcgggc
4261 cgtattccgg cacaagactg gcgacgatga tgacgaggaa gacgtgcagc agcagcagcc
4321 gcagcaccgt catcagcagc agcgtaacca tcaggaggat gctggtgatg gaggagcagc
4381 cgtatcagca acaacaacaa cagcagcagc cacatctagt ggcagtacca agaagctgcg
4441 cacaccggag gtggcatgta caatttgtgg tgcccgtttc accgatcagg agcactttag
4501 caagcacata cagaagcatg aacaggatct atatgtggac aatccgttgg cggcgatgtt
4561 cgatgatggg ccagcggatg cggcccaatt taaggtggag ggccagaacg agaatgggga
4621 atatgcgtgc gatatgtgta caaagacatt cccccaagtg attgcactca aagtgcatcg
4681 caagtggcat ttcagaggtg atagcaagca gaaccacatc gacagcgaaa cgacgaatat
4741 catcaacaac aacaacaaca attcggtgaa caactccaca tcgatgctac gggagctgca
4801 tgcagtgggt ctgacgccca accaacaaca gcaacagcag cagcagagcc aacaacagaa
4861 ctccacgtcc acgccgaaca gcaacagcaa caacaacagc agcagcagga gcaacaacaa
4921 caacaacagc agcagcagga gcaaatcaat gaaacggaaa cgtgaattga aatgcgaata
4981 ctgcccctcg accttcatca gcaacaacaa cctgcgacga catatgtatg agctgcataa
5041 gcatgaagtg agtagcctgc cagcaccgcc agtgattgtg gttgatgagc cactgagctg
5101 tcgacgttgc ggcaatctga aattcgagac aaaggaactg tggatcgaac acaagctggc
5161 cgatgcgaag gtggtgcgac cgttttgtcc cttccaatgg ggctgtgata tgtgcggcga
5221 gtacttgtcg cgcaaggaga agctcatgaa tcacatcaat aatcatttga aggaggatgt
5281 cattgtacca gtcgccacac aatcggccat cgacagagaa cgggcatcat caggtgcatc
5341 gtcagcatcc gaggcaacaa catccaaagc atccggattg gttgagccgc cacccagcgc
5401 cgccgcagcg ttgcaaaaga aaacggaaga gaatggtgga ctggatacag cggaggcgac
5461 ggcggcagcg gcagaggcag aggcggtgaa ggcagaggaa gatgatagcg aaatggagga
5521 cggggacagc tcagacgctg atgaagaaag ctccggcaca ggggatgagg acgacgacga
5581 cactgaagac gatgatgaag aagatgagct gcaggatgag gacgacgatg aagatgaggg
5641 cgaagatgaa gagggtgtgc ccccaccaac acctgccaca caattgttgc agccgcaaca
5701 caagcatgcc aataatattg acaatgatga tgatctcgtc gaggaagtga acagctccga
5761 tgatgaggag ccagaggatg gagacgacga cgacgacgac gatgaagaag acgaagacga
5821 cgaggagacg gaggaggtag aggcagaggc acagggctcg tcacagcccc ttatgaatgg
5881 caagtctgaa aagcatcaaa ccacgcccca acagcaaagg gatgagatat tgcccagctc
5941 cgacgaggac aacgaagatc aggatggcca tccaatggcc attgaagaca ttattgaaga
6001 agaatttgat gaagacgatg atgtggagga ggtgtatgat gagcagaatg tcgatggggg
6061 ggccacatcg tcggcatctt catcagagag cgaatcaaca tccacgacca catccaattc
6121 gcattcaact ggtgagcggc gtaagaaggc tggcgatcag tcgtcaaatc ccagctttac
6181 ctgtgatcta tgtcaacttt gtttcgattc ccaggagctt ctccagtctc acatcaaaag
6241 ccattttctc aatggtccaa aaatctctgc ctcacaagca acaagcaatg caacagcagt
6301 agcaccagca acagcaacgg caacggtaac gacgacggcc acggcagcgg cagcggcgac
6361 gactgttccc agcagttgta acaacaatgc ctcgaccaaa tcctcgaagc tctctccagc
6421 agcagcagta gtagcagcag cagtcaccgc caacaccagc aacaaccggc aaagaagtgc
6481 cgccacagaa atgggggcca gcggtagcag cagcagcaac agcaattgag cggatcatcg
6541 taggtactct cgtattaccc cagtcgtttg tccacaatca tcctcgtccg aattcacgtt
6601 cacacttgaa acaacttgta caaagccagc caatcaccga ctcattcacc aaaagaccat
6661 cccacaatcc accaccatcg accaccaaac aacacacaac aaaaaaacag catgaaaaac
6721 catcatgcaa aatgatcatc agaaaaaacg cattccatgc attcaacaag cag