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LOCUS XM_022371716 3861 bp mRNA linear INV 14-MAY-2021 (LOC111077440), mRNA. ACCESSION XM_022371716 VERSION XM_022371716.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022371716.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3861 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3861 /gene="LOC111077440" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns" /db_xref="GeneID:111077440" CDS 306..2471 /gene="LOC111077440" /codon_start=1 /product="amyloid protein-binding protein 2" /protein_id="XP_022227408.2" /db_xref="GeneID:111077440" /translation="MANNNQLMNLIASAPANNNSPKPLYDLSLHASICSLDGNTVPAL DRISRLPELPRNLLIDVYEMMSQRDSLQDTLLEELSRLEVFARLVRHAPARSKLLRIV AALMANRKMLASRLSEAYVGRYSTKKEQDGDEDGEQPGEHQGRGGGGAEGQEQSQDSL DERAKQLLQEYSQLPIPDEDMASTSSSASAMARARSSQTECPNHELELSVITTAMDQP GSTTPNADAAAAAADDDLDELNGEELQEIDLGLRLGSFLSEAGWMQESISVLTCLNER LKRLAPHKHWLVMRLDCLQRLLYAESAHCNFKLAQRTYNELIELKRSISDRVPSDLVA MTYTQISAMFFARNEYNNSHMWSLHAMRRLKHSATPRIAIDVLRQAAKACVVKRDFAR ANLLICQAVRRAREHFGRKHQKYGDTLLDYGFFLLNVDSVFQSVNVYKEALGVRRGIF GNMNFHVAIAHEDLSYAYYVHEYSTGDFSCAQDHVDKAVGIMKKLVPSNHLMLASAKR VKALLLEEIALDKMADGMDEEDLLLQSEELHNFALLLSLEVFGEVNVQTAKHYGNLGR LYQTMNRFEEAERMHQKAIKIKTDLLGPFDYEVGLSIGHLASLYNYQMKKYREAEKLY LRSIDISLRLFGLSYSGLEYDYLGLCHVYETLHDFEKYLQYAHTLENWQMLRGQNITQ NKFSYPAIEQDYSIDEVKNKFYDTCESSSSSSPQKTEGK" misc_feature 1836..>2303 /gene="LOC111077440" /note="Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]; Region: Spy; COG3914" /db_xref="CDD:443119" misc_feature 1971..2195 /gene="LOC111077440" /note="Tetratricopeptide repeat; Region: TPR_12; pfam13424" /db_xref="CDD:315987" misc_feature 1977..2063 /gene="LOC111077440" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" misc_feature order(1980..1982,1989..1994,2001..2006,2010..2012, 2106..2108,2115..2120,2127..2132,2139..2144,2235..2237, 2244..2249,2256..2261,2268..2270) /gene="LOC111077440" /note="putative protein binding surface [polypeptide binding]; other site" /db_xref="CDD:276809" misc_feature 2100..2195 /gene="LOC111077440" /note="TPR repeat [structural motif]; Region: TPR repeat" /db_xref="CDD:276809" ORIGIN 1 gcccttatcg agtaaaaaag ggaaaaaaga attcgagtgc tacagtgttt ttttacgctt 61 cacggcccga aaaacagcgg agttcctcca gagtggcccg cagtacacgt gagagagaaa 121 cttagatgca ttcgagtttg tagtgcaccc gagtgccacc ccgcccctgc tccacacgca 181 ccagcgagag acgtgagcgc agcagtgtcg ccgcagccca gccccagctc taactgctgc 241 ccccgagccc gagccaagta gcaaacggtg cagaggatca tcatcatcgt cgtcgtccca 301 tcgcaatggc caacaacaat caactgatga atctcatcgc gtcggccccc gccaacaaca 361 acagccccaa gcccctctac gacctgtccc tgcatgcatc gatctgcagc ctggatggga 421 acacggtgcc agcactggat cggattagcc ggttgccgga gctgccgcgc aatttgctta 481 tcgatgtcta cgaaatgatg tcgcagcggg attccctaca ggacaccctg ctggaggagc 541 tctcgcgcct ggaggtgttc gcacggctcg tgcgccacgc accagcacgc agcaaactgc 601 tgagaattgt ggccgccctg atggccaaca gaaagatgct cgctagccga cttagcgagg 661 cctatgtggg tcgctacagc acaaaaaagg agcaggatgg cgacgaggat ggggagcagc 721 caggcgaaca tcaggggaga ggaggaggag gtgccgaggg gcaagaacag tcgcaggaca 781 gtctggatga gcgggccaaa cagctgctgc aggagtacag ccagctgccg ataccggacg 841 aggatatggc cagcaccagc agcagtgcca gtgccatggc cagggccaga tccagccaaa 901 cggagtgccc caaccatgag ctcgaactca gtgtgattac tactgccatg gatcagccag 961 gatctacaac gccgaatgca gatgcagctg cagctgcagc cgatgacgac ctggacgaac 1021 tgaacgggga ggagctgcag gaaattgatc tgggtctgcg tctcggttcg ttcctctccg 1081 aggccggttg gatgcaggag agcatctcag tgctgacgtg cctcaacgaa agactaaagc 1141 gtctggcgcc ccacaagcac tggctggtga tgcgccttga ctgcctgcag cgcctcctgt 1201 atgcggaatc ggcccactgt aacttcaagc tggcccagcg cacctacaac gaactgatag 1261 agctgaagcg ctcaattagc gaccgggtgc cctcggatct ggtggccatg acctacacac 1321 agatatcggc catgttcttt gcccgcaacg agtacaacaa cagccacatg tggagcctgc 1381 atgcgatgcg tcgcctcaag cactcggcca caccgcgcat cgccatcgat gtgctgaggc 1441 aggcggccaa ggcctgtgtg gttaagcgag actttgcccg ggccaatctg ttaatctgtc 1501 aggctgtgcg acgcgctagg gaacactttg gccgcaagca tcaaaagtac ggggacaccc 1561 tcctggatta tggcttcttc ttgcttaatg tggactcggt gttccagtcg gtgaacgtgt 1621 acaaggaggc gctgggcgtc cgtcgcggca tctttggcaa catgaacttc catgtggcca 1681 ttgcccacga ggatctgtcg tatgcgtact acgtgcacga gtacagcacc ggcgacttta 1741 gctgtgccca ggaccatgtg gacaaggctg tgggcattat gaagaagctg gtgcccagca 1801 accatctaat gttggcctcg gccaagcgtg tgaaggccct gctgctggag gagattgcac 1861 tggacaagat ggccgatggc atggacgagg aggatctact gctgcagtcc gaggagctgc 1921 ataactttgc attgctgctc tcgctcgagg tattcggcga ggtgaacgtg cagacggcca 1981 agcactatgg caatctgggg cggctctatc agacaatgaa ccgcttcgag gaggccgaac 2041 gtatgcatca gaaggcaatc aagatcaaaa cggatctgct ggggccgttc gactacgagg 2101 tgggcctctc cattggccac ctggcctcgc tctacaacta ccaaatgaaa aagtaccgcg 2161 aggcggaaaa gctctacctg cgcagcatcg atataagtct acgtctgttc gggctgtcgt 2221 attccggcct ggagtacgac tatctggggc tgtgtcatgt ctacgagacg ctgcatgact 2281 ttgagaagta tctgcagtac gcgcacacgc tggagaactg gcagatgcta cgcggccaga 2341 acatcaccca gaataagttc agctaccccg ccatcgagca ggactactcc atcgatgagg 2401 tcaaaaacaa attctatgac acgtgcgaga gcagcagcag cagcagcccc cagaaaacgg 2461 agggaaagtg agccagggag ggagcatcgt catggagcag cagccgcact ggaggcggca 2521 tctgttgtat ggcatagcga tagggtttat ccacccaatg cactgtgtgc aatgcacccc 2581 cctccccctt gctctataca tacttttttt ttattgtaaa tattatgtcc tgtgtccagc 2641 atggacacac ggatgcagca gattgattag ccttgtattc ttttattttg tttgtcattt 2701 ccatcgaata agtccaaaac gtagttaaaa atatttagta gggcccccat acccaggagt 2761 cagagcagcc acgtagccag caagccagcc agtcagccag cagtaggtaa tcgtatcgta 2821 tcgtatccac tatccactat taagaaccat cgaatacgtc cagttccacg ccccccgtca 2881 gttagcagtc agcagcagta aggcggttac cccacacctc tcccccctgc cctaggctaa 2941 gttccaattg aaagttgaaa gttaggaagc aaaaaaagag tattgctagt ttttgctgat 3001 acgatatctt gatatctttg attttccaca catattttta ttcgtcttat ttggtttttg 3061 tttattgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgcgt gaatatttgt taaaaattca 3121 ctgaaaagca agcagttgat tatcgttctt aaaaagttct taattttgtt tttttgatgg 3181 tttatagtta attacacatg tgattgagat gatacgcaaa aaagatagcg atagctacag 3241 cagctttcca tatagagaaa atattgttta tttttttaag cgcatgcccg ggcaacaact 3301 gtcctcgatt aattagaacg attttgtagc acaatttgaa gtttaatttc gaggctaccc 3361 cgccaacgac caaccgccaa ttcccaaacc ctaaccgcca accgccaccg ccagtaaatg 3421 ctaactagaa gcgagaagaa aacaaaatgt tgtatagacg accggagaag gaataagcga 3481 aaaaaatgta tagttctaag cacaatcatt atccactatg attaatattt cataccgatg 3541 gtagctgatg cgtgcacaca tgtaacaagt atttgcagct aagtagtagg cacacccaga 3601 gccatcctca tccacgtatg cccacgtgga aaacaatgaa gtggacggaa ccggtgggag 3661 cgataatcgt acgccgtatg tggtagcggc aagaagccac cagtgacatc tacaaacatt 3721 tatgagtaaa tttcatacac aattgaaacc caatacacgt atacttatga acattgcagt 3781 tgcaagcaat ttttggcatt acttagcagt agcttaagag caacgtcgta aatctcaaaa 3841 taaatacaaa aaccaatcaa a